Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dipodomys_20ordii_20[refseq_20GCF_5F000151885.1_202014-12-12]
65,193 sequences; 2,236,368,823 total letters
Query= NC_021221.1
Length=45781
Score E
Sequences producing significant alignments: (Bits) Value
seq4931 84.2 6e-12
>seq4931
Length=27746
Score = 84.2 bits (92), Expect = 6e-12
Identities = 178/266 (67%), Gaps = 0/266 (0%)
Strand=Plus/Plus
Query 22051 AACATCGGCGCGCGGTGGTCCGTAGATCAGATGGACACGGTGAATCCGTTCAACCACCAC 22110
||||| || | ||||||| ||||| |||||||||||| ||||| || || || |||
Sbjct 16718 AACATAGGAACCAGGTGGTCAATAGATGTGATGGACACGGTTAATCCATTTAATCATCAC 16777
Query 22111 CGCAACTGGGGTCTGAAGTACCGCTCCCAATTGCTGGGCAACAGCCGGTACTGTCGGTTC 22170
| || ||| ||| |||| | || || | | || || | || || | ||
Sbjct 16778 AGAAATACTGGTTTGAGGTACAGGTCTCAGCTATTAGGAAATGGTCGCTATGCTTCCTTT 16837
Query 22171 CACATTCAAGTGCCTCAGAAGTATTTCGCGATTAAGAACCTGTTGCTCCTGCCGGGCACT 22230
|| ||||| || || || |||| ||| || |||| | || | || || ||||| |
Sbjct 16838 CATATTCAGGTTCCGCAAAAGTTTTTTGCACTTAAAAGTTTGCTTCTGCTACCGGGATCG 16897
Query 22231 TACACTTACGAATGGGTACTGAGGAAAGACCCCAACATGATCCTACAGTCGAGTTTGGGT 22290
|||| |||||||||| | || ||||| |||||||| | ||| | | | ||
Sbjct 16898 TACAGTTACGAATGGTCTTTTAGAAAAGATGTAAACATGATTTTGCAGAGTACTCTTGGC 16957
Query 22291 AACGATCTGAGAGCAGACGGCGCGTC 22316
|| |||||||| | ||||| |||||
Sbjct 16958 AATGATCTGAGGGAGGACGGAGCGTC 16983
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 146264279310838
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |