Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dipodomys_20ordii_20[refseq_20GCF_5F000151885.1_202014-12-12]
65,193 sequences; 2,236,368,823 total letters
Query= NC_021312.1
Length=459984
Score E
Sequences producing significant alignments: (Bits) Value
seq19 91.5 4e-13
seq79 86.0 2e-11
>seq19
Length=16591509
Score = 91.5 bits (100), Expect = 4e-13
Identities = 146/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 302607 ACCAGTTGTAGATGTTTTTACAGCTGTATCAATTAGACCAACACGACCACCCATAGCATG 302666
|||||| || || || |||||||| || || ||||| |||| || ||||| |||||
Sbjct 11971597 ACCAGTCTCAGCAGTCTTGACAGCTGTGTCGATGAGACCCTCACGCCCTCCCATGGCATG 11971656
Query 302667 GAAGAATAGCTCTTCCGGTCGTAGCCCCCCAATAAAGGAGCTCTCAACGAAACCACGCGC 302726
|||||| | ||| ||| || || | | ||||| |||| || ||||||||
Sbjct 11971657 GAAGAAGAACTCGGTGGGTGTGAGGCCAGCCAAGTAGGAGTTCTCCACAAAACCACGGCT 11971716
Query 302727 CTCGGGCGAATCGTCGAACTTGGTAAAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGG 302786
||| ||| || || |||| | ||||| ||||| |||| || || | || ||||
Sbjct 11971717 CTCAGGCCCATAATCATCCTTGATGAAGTGAGGCAGAGTCCGGTGCTTGAATCCAAATGG 11971776
Query 302787 GATACGCTTTCCATCAACGTTCTGCTGTCC 302816
||| || || || || ||||| ||||| ||
Sbjct 11971777 GATCCGTTTGCCCTCCACGTTTTGCTGCCC 11971806
>seq79
Length=7578575
Score = 86.0 bits (94), Expect = 2e-11
Identities = 101/137 (74%), Gaps = 0/137 (0%)
Strand=Plus/Plus
Query 448894 CCGAGGAAATCAAGAAGGCATATAAACGACTCGCAATTAAACATCATCCTGATAAAAATC 448953
||||||| || || || || || | | | ||| ||||| || |||||||||||||
Sbjct 1602150 CCGAGGACATTAAAAAAGCTTACCATAAAGTAGCACTTAAATGGCACCCTGATAAAAATC 1602209
Query 448954 CAGATAATAAAGCAGAGGCAGAGGAGAAATTCAAAGAGATTTCTCAAGCTTATGAAATTG 449013
|||| ||||||| ||| |||||| | ||||||||||| | || | || ||||| |
Sbjct 1602210 CAGAAAATAAAGAAGAAGCAGAGAAAAAATTCAAAGAAGTAGCTGAGGCATATGAGGTAC 1602269
Query 449014 TAACAAATAAAGAAAAA 449030
| ||||||| ||||||
Sbjct 1602270 TGTCAAATAATGAAAAA 1602286
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1470588212376041
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |