Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dipodomys_20ordii_20[refseq_20GCF_5F000151885.1_202014-12-12]
65,193 sequences; 2,236,368,823 total letters
Query= NC_021858.1
Length=1908524
Score E
Sequences producing significant alignments: (Bits) Value
seq27 161 1e-33
seq26 152 6e-31
seq206 149 8e-30
seq138 149 8e-30
>seq27
Length=19735992
Score = 161 bits (178), Expect = 1e-33
Identities = 157/202 (78%), Gaps = 0/202 (0%)
Strand=Plus/Plus
Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402
|| ||||||| || ||| ||| | |||||||||||| ||||| | |||||||| ||
Sbjct 19114596 GCTTGGCCAGCTCCCCGGGCAGCAGCAGGCGCACGGCCGTCTGCACCTCGCGCGACGTGA 19114655
Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462
| || ||||||||| |||||||||| || ||||||| | ||||||| |||| |
Sbjct 19114656 TGGTCGAGCGCTTGTTGTAGTGCGCCAGGCGCGAGGCCTCGCCGGCGATGCGCTCGAAGA 19114715
Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522
||||||| || ||||||||||||| ||| | |||| |||||||| ||||||||
Sbjct 19114716 TGTCGTTCACGAACGAGTTCATGATGCCCATAGCCTTGGACGAGATGCCGGTGTCGGGGT 19114775
Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544
|||||||||| |||||||||||
Sbjct 19114776 GCACCTGCTTCAGCACCTTGTA 19114797
>seq26
Length=16019130
Score = 152 bits (168), Expect = 6e-31
Identities = 155/202 (77%), Gaps = 0/202 (0%)
Strand=Plus/Minus
Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402
|| |||||| || ||| ||| | |||||||||||| ||||||||||| |||| ||
Sbjct 10652865 GCTTGGCCAACTCCCCGGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCCCGCGACGTGA 10652806
Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462
| || ||||||||| |||||||||| || |||||| | ||||||| |||| |
Sbjct 10652805 TGGTCGAGCGCTTGTTGTAGTGCGCCAGGCGCGACGCCTCGCCGGCGATGCGCTCGAAGA 10652746
Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522
||||||| || ||||||||||||| ||| | |||| |||||||| ||| ||||
Sbjct 10652745 TGTCGTTCACGAACGAGTTCATGATGCCCATGGCCTTGGACGAGATGCCGGTGTCCGGGT 10652686
Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544
|||||||||| |||||||||||
Sbjct 10652685 GCACCTGCTTCAGCACCTTGTA 10652664
Score = 149 bits (164), Expect = 8e-30
Identities = 154/202 (76%), Gaps = 0/202 (0%)
Strand=Plus/Plus
Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402
|| ||||||| || ||| ||| | |||||||||||| ||||||||||| |||| ||
Sbjct 10632893 GCTTGGCCAGCTCCCCGGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCCCGCGACGTGA 10632952
Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462
| || ||||||||| |||||||||| || || ||| ||||||| |||| |
Sbjct 10632953 TGGTCGAGCGCTTGTTGTAGTGCGCCAGGCGCGACGCTTCGCCCGCGATGCGCTCGAAGA 10633012
Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522
||||||| || ||||||||||||| ||| | |||| |||||||| ||| ||||
Sbjct 10633013 TGTCGTTCACGAACGAGTTCATGATGCCCATGGCCTTGGACGAGATGCCGGTGTCCGGGT 10633072
Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544
|||||||||| |||||||||||
Sbjct 10633073 GCACCTGCTTCAGCACCTTGTA 10633094
Score = 143 bits (158), Expect = 3e-28
Identities = 153/202 (76%), Gaps = 0/202 (0%)
Strand=Plus/Plus
Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402
|| ||||||| || || ||| | |||||||||||| ||||||||||| |||| ||
Sbjct 10670966 GCTTGGCCAGCTCCCCCGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCCCGCGACGTGA 10671025
Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462
| || ||||||||| |||||||||| || || ||| ||||||| |||| |
Sbjct 10671026 TGGTCGAGCGCTTGTTGTAGTGCGCCAGGCGCGACGCTTCGCCCGCGATGCGCTCGAAGA 10671085
Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522
||||||| || ||||||||||||| ||| | |||| |||||||| ||| ||||
Sbjct 10671086 TGTCGTTCACGAACGAGTTCATGATGCCCATGGCCTTGGACGAGATGCCGGTGTCCGGGT 10671145
Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544
|||||||||| |||||||||||
Sbjct 10671146 GCACCTGCTTCAGCACCTTGTA 10671167
>seq206
Length=3546904
Score = 149 bits (164), Expect = 8e-30
Identities = 163/217 (75%), Gaps = 0/217 (0%)
Strand=Plus/Plus
Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402
|| ||||||| || ||| ||| | |||||||||||| ||||||||||| || | ||
Sbjct 185853 GCTTGGCCAGCTCCCCGGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCCCGAGACGTGA 185912
Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462
| || ||||||||| |||||||||| || |||||| ||||||| |||| |
Sbjct 185913 TAGTCGAGCGCTTGTTGTAGTGCGCCAGGCGAGAAGCCTCGCCCGCGATGCGCTCGAAGA 185972
Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522
||||||| || ||||||||||||| ||| | |||| |||||||| ||| ||||
Sbjct 185973 TGTCGTTCACGAACGAGTTCATGATGCCCATGGCCTTGGACGAGATGCCGGTGTCCGGGT 186032
Query 1254523 GCACCTGCTTGAGCACCTTGTAGATGAACGACGAGTA 1254559
| |||||||| ||||||||||| | | || ||||||
Sbjct 186033 GGACCTGCTTCAGCACCTTGTACACGTACACCGAGTA 186069
Score = 143 bits (158), Expect = 3e-28
Identities = 162/217 (75%), Gaps = 0/217 (0%)
Strand=Plus/Minus
Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402
|| ||||||| || ||| ||| | |||||||||||| ||||||||||| || | ||
Sbjct 215262 GCTTGGCCAGCTCCCCGGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCCCGAGACGTGA 215203
Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462
| || ||||||||| |||||||||| || |||||| ||||||| |||| |
Sbjct 215202 TGGTCGAGCGCTTGTTGTAGTGCGCCAGGCGCGACGCCTCGCCCGCGATGCGCTCGAAGA 215143
Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522
|||| || || ||||||||||||| ||| | |||| |||||||| ||| ||||
Sbjct 215142 TGTCATTCACGAACGAGTTCATGATGCCCATGGCCTTGGACGAGATGCCGGTGTCCGGGT 215083
Query 1254523 GCACCTGCTTGAGCACCTTGTAGATGAACGACGAGTA 1254559
| |||||||| ||||||||||| | | || ||||||
Sbjct 215082 GGACCTGCTTCAGCACCTTGTACACGTACACCGAGTA 215046
Score = 143 bits (158), Expect = 3e-28
Identities = 162/217 (75%), Gaps = 0/217 (0%)
Strand=Plus/Plus
Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402
|| ||||||| || ||| ||| | |||||||||||| ||||||||||| || | ||
Sbjct 224084 GCTTGGCCAGCTCCCCGGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCCCGAGACGTGA 224143
Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462
| || |||||| || |||||||||| || |||||| ||||||| |||| |
Sbjct 224144 TGGTCGAGCGCTTATTGTAGTGCGCCAGGCGCGACGCCTCGCCCGCGATGCGCTCGAAGA 224203
Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522
||||||| || ||||||||||||| ||| | |||| |||||||| ||| ||||
Sbjct 224204 TGTCGTTCACGAACGAGTTCATGATGCCCATGGCCTTGGACGAGATGCCGGTGTCCGGGT 224263
Query 1254523 GCACCTGCTTGAGCACCTTGTAGATGAACGACGAGTA 1254559
| |||||||| ||||||||||| | | || ||||||
Sbjct 224264 GGACCTGCTTCAGCACCTTGTACACGTACACCGAGTA 224300
Score = 143 bits (158), Expect = 3e-28
Identities = 162/217 (75%), Gaps = 0/217 (0%)
Strand=Plus/Minus
Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402
|| |||| || || ||| ||| | |||||||||||| ||||||||||| || | ||
Sbjct 258248 GCTTGGCAAGCTCCCCGGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCCCGAGACGTGA 258189
Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462
| || ||||||||| |||||||||| || |||||| ||||||| |||| |
Sbjct 258188 TGGTCGAGCGCTTGTTGTAGTGCGCCAGGCGAGACGCCTCGCCCGCGATGCGCTCGAAGA 258129
Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522
||||||| || ||||||||||||| ||| | |||| |||||||| ||| ||||
Sbjct 258128 TGTCGTTCACGAACGAGTTCATGATGCCCATGGCCTTGGACGAGATGCCGGTGTCCGGGT 258069
Query 1254523 GCACCTGCTTGAGCACCTTGTAGATGAACGACGAGTA 1254559
| |||||||| ||||||||||| | | || ||||||
Sbjct 258068 GGACCTGCTTCAGCACCTTGTACACGTACACCGAGTA 258032
Score = 140 bits (154), Expect = 4e-27
Identities = 161/217 (74%), Gaps = 0/217 (0%)
Strand=Plus/Plus
Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402
|| ||||||| || ||| ||| | |||||||||||| ||||||||||| || | ||
Sbjct 236445 GCTTGGCCAGCTCCCCGGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCCCGAGACGTGA 236504
Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462
| || ||||||||| |||||||||| || |||||| ||||||| |||| |
Sbjct 236505 TGGTCGAGCGCTTGTTGTAGTGCGCCAGGCGCGACGCCTCGCCCGCGATGCGCTCGAAGA 236564
Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522
|||| || || ||||||||||||| ||| | |||| |||||||| ||| ||||
Sbjct 236565 TGTCATTCACGAACGAGTTCATGATGCCCATGGCCTTGGACGAGATGCCGGTGTCCGGGT 236624
Query 1254523 GCACCTGCTTGAGCACCTTGTAGATGAACGACGAGTA 1254559
| || ||||| ||||||||||| | | || ||||||
Sbjct 236625 GGACTTGCTTCAGCACCTTGTACACGTACACCGAGTA 236661
Score = 140 bits (154), Expect = 4e-27
Identities = 152/202 (75%), Gaps = 0/202 (0%)
Strand=Plus/Minus
Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402
|| ||||||| || ||| ||| | |||||||||||| ||||||||||| || | ||
Sbjct 310642 GCTTGGCCAGCTCCCCGGGCAGAAGCAGGCGCACGGCCGTCTGGATCTCCCGAGACGTGA 310583
Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462
| || ||||||||| |||||||||| || |||||| ||||||| |||| |
Sbjct 310582 TGGTCGAGCGCTTGTTGTAGTGCGCCAGGCGAGAAGCCTCGCCCGCGATGCGCTCGAAGA 310523
Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522
||||||| || ||||||||||||| ||| | ||| |||||||| ||| ||||
Sbjct 310522 TGTCGTTCACGAACGAGTTCATGATGCCCATGGCCTTAGACGAGATGCCAGTGTCCGGGT 310463
Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544
| |||||||| |||||||||||
Sbjct 310462 GGACCTGCTTCAGCACCTTGTA 310441
Score = 129 bits (142), Expect = 7e-24
Identities = 152/206 (74%), Gaps = 0/206 (0%)
Strand=Plus/Plus
Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402
|| ||||||| || ||| ||| | |||||||||||| ||||||||||| || | ||
Sbjct 479606 GCTTGGCCAGCTCCCCGGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCCCGAGACGTGA 479665
Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462
| || ||||||||| |||| ||||| || |||||| ||||||| |||| |
Sbjct 479666 TGGTCGAGCGCTTGTTGTAGTGAGCCAGGCGCGACGCCTCGCCCGCGATGCGCTCGAAGA 479725
Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522
||||| |||| || |||||||||| ||| | |||| ||||||||| || || |
Sbjct 479726 TGTCGGTGACGAAAGAGTTCATGATGCTCATGGCCTTGGAGGAGATGCCAGTATCAGGAT 479785
Query 1254523 GCACCTGCTTGAGCACCTTGTAGATG 1254548
| ||||| || |||||||| ||||||
Sbjct 479786 GAACCTGTTTCAGCACCTTATAGATG 479811
>seq138
Length=3020394
Score = 149 bits (164), Expect = 8e-30
Identities = 163/217 (75%), Gaps = 0/217 (0%)
Strand=Plus/Plus
Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402
|| ||||||| || ||| ||| | |||||||||||| ||||||||||| || | ||
Sbjct 2617827 GCTTGGCCAGCTCCCCGGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCCCGAGACGTGA 2617886
Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462
| || ||||||||| |||||||||| || |||||| ||||||| |||| |
Sbjct 2617887 TGGTCGAGCGCTTGTTGTAGTGCGCCAGGCGCGACGCCTCGCCCGCGATGCGCTCGAAGA 2617946
Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522
||||||| || ||||||||||||| ||| | |||| |||||||| ||| ||||
Sbjct 2617947 TGTCGTTCACGAACGAGTTCATGATGCCCATGGCCTTGGATGAGATGCCGGTGTCCGGGT 2618006
Query 1254523 GCACCTGCTTGAGCACCTTGTAGATGAACGACGAGTA 1254559
| |||||||| ||||||||||| | | || ||||||
Sbjct 2618007 GGACCTGCTTCAGCACCTTGTACACGTACACCGAGTA 2618043
Score = 149 bits (164), Expect = 8e-30
Identities = 163/217 (75%), Gaps = 0/217 (0%)
Strand=Plus/Plus
Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402
|| ||||||| || ||| ||| | |||||||||||| ||||||||||| || | ||
Sbjct 2637740 GCTTGGCCAGCTCCCCGGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCCCGAGACGTGA 2637799
Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462
| || ||||||||| |||||||||| || |||||| ||||||| |||| |
Sbjct 2637800 TGGTCGAGCGCTTGTTGTAGTGCGCCAGGCGCGACGCCTCGCCCGCGATGCGCTCGAAGA 2637859
Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522
||||||| || ||||||||||||| ||| | |||| |||||||| ||| ||||
Sbjct 2637860 TGTCGTTCACGAACGAGTTCATGATGCCCATGGCCTTGGATGAGATGCCGGTGTCCGGGT 2637919
Query 1254523 GCACCTGCTTGAGCACCTTGTAGATGAACGACGAGTA 1254559
| |||||||| ||||||||||| | | || ||||||
Sbjct 2637920 GGACCTGCTTCAGCACCTTGTACACGTACACCGAGTA 2637956
Score = 149 bits (164), Expect = 8e-30
Identities = 163/217 (75%), Gaps = 0/217 (0%)
Strand=Plus/Minus
Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402
|| ||||||| || ||| ||| | |||||||||||| ||||||||||| || | ||
Sbjct 2655686 GCTTGGCCAGCTCCCCGGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCCCGAGACGTGA 2655627
Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462
| || ||||||||| |||||||||| || |||||| ||||||| |||| |
Sbjct 2655626 TGGTCGAGCGCTTGTTGTAGTGCGCCAGGCGAGAAGCCTCGCCCGCGATGCGCTCGAAGA 2655567
Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522
||||||| || ||||||||||||| ||| | |||| |||||||| ||| ||||
Sbjct 2655566 TGTCGTTCACGAACGAGTTCATGATGCCCATGGCCTTGGACGAGATGCCGGTGTCCGGGT 2655507
Query 1254523 GCACCTGCTTGAGCACCTTGTAGATGAACGACGAGTA 1254559
| |||||||| ||||||||||| | | || ||||||
Sbjct 2655506 GGACCTGCTTCAGCACCTTGTACACGTACACCGAGTA 2655470
Score = 149 bits (164), Expect = 8e-30
Identities = 163/217 (75%), Gaps = 0/217 (0%)
Strand=Plus/Minus
Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402
|| ||||||| || ||| ||| | |||||||||||| ||||||||||| || | ||
Sbjct 2811070 GCTTGGCCAGCTCCCCGGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCCCGAGACGTGA 2811011
Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462
| || ||||||||| |||||||||| || |||||| ||||||| |||| |
Sbjct 2811010 TGGTCGAGCGCTTGTTGTAGTGCGCCAGGCGCGACGCCTCGCCCGCGATGCGCTCGAAGA 2810951
Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522
||||||| || ||||||||||||| ||| | |||| |||||||| ||| ||||
Sbjct 2810950 TGTCGTTCACGAACGAGTTCATGATGCCCATGGCCTTGGATGAGATGCCGGTGTCCGGGT 2810891
Query 1254523 GCACCTGCTTGAGCACCTTGTAGATGAACGACGAGTA 1254559
| |||||||| ||||||||||| | | || ||||||
Sbjct 2810890 GGACCTGCTTCAGCACCTTGTACACGTACACCGAGTA 2810854
Score = 149 bits (164), Expect = 8e-30
Identities = 163/217 (75%), Gaps = 0/217 (0%)
Strand=Plus/Minus
Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402
|| ||||||| || ||| ||| | |||||||||||| ||||||||||| || | ||
Sbjct 2816260 GCTTGGCCAGCTCCCCGGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCCCGAGACGTGA 2816201
Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462
| || ||||||||| |||||||||| || |||||| ||||||| |||| |
Sbjct 2816200 TGGTCGAGCGCTTGTTGTAGTGCGCCAGGCGCGACGCCTCGCCCGCGATGCGCTCGAAGA 2816141
Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522
||||||| || ||||||||||||| ||| | |||| |||||||| ||| ||||
Sbjct 2816140 TGTCGTTCACGAACGAGTTCATGATGCCCATGGCCTTGGACGAGATGCCGGTGTCCGGGT 2816081
Query 1254523 GCACCTGCTTGAGCACCTTGTAGATGAACGACGAGTA 1254559
| |||||||| ||||||||||| | | || ||||||
Sbjct 2816080 GGACCTGCTTCAGCACCTTGTACACGTACACCGAGTA 2816044
Score = 143 bits (158), Expect = 3e-28
Identities = 162/217 (75%), Gaps = 0/217 (0%)
Strand=Plus/Plus
Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402
|| ||||||| || || ||| | |||||||||||| ||||||||||| || | ||
Sbjct 2647544 GCTTGGCCAGCTCCCCAGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCCCGAGACGTGA 2647603
Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462
| || ||||||||| |||||||||| || |||||| ||||||| |||| |
Sbjct 2647604 TGGTCGAGCGCTTGTTGTAGTGCGCCAGGCGAGAAGCCTCGCCCGCGATGCGCTCGAAGA 2647663
Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522
||||||| || ||||||||||||| ||| | |||| |||||||| ||| ||||
Sbjct 2647664 TGTCGTTCACGAACGAGTTCATGATGCCCATGGCCTTGGACGAGATGCCGGTGTCCGGGT 2647723
Query 1254523 GCACCTGCTTGAGCACCTTGTAGATGAACGACGAGTA 1254559
| |||||||| ||||||||||| | | || ||||||
Sbjct 2647724 GGACCTGCTTCAGCACCTTGTACACGTACACCGAGTA 2647760
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 6101789157121181
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