Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dipodomys_20ordii_20[refseq_20GCF_5F000151885.1_202014-12-12]
65,193 sequences; 2,236,368,823 total letters
Query= NC_023177.1
Length=124688
Score E
Sequences producing significant alignments: (Bits) Value
seq66 82.4 6e-11
>seq66
Length=5789316
Score = 82.4 bits (90), Expect = 6e-11
Identities = 144/210 (69%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615
||||| || || || || || | || ||||| ||||| ||| | || |||| | |
Sbjct 2649668 ATGCAGATCTTCGTGAAGACCCTGACTGGCAAGACCATCACCCTGGAGGTGGAGCCCAGT 2649727
Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675
|| || ||| | || || ||||| || || |||||| | ||| || |||
Sbjct 2649728 GACACCATCGAGAATGTCAAGGCTAAGATCCAGGACAAGGAAGGCATTCCCCCTGACCAG 2649787
Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735
||||| || || | |||||| || |||||||| || | | || || | |||||||||
Sbjct 2649788 CAGAGGCTGATCTTTGCGGGCAAGCAGCTGGAAGATGGCCGTACCCTGTCTGACTACAAC 2649847
Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGTG 107765
|| || |||||||| || ||||| |||||
Sbjct 2649848 ATCCAGAAGGAGTCCACTCTGCACCTGGTG 2649877
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 398559876551977
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |