Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dipodomys_20ordii_20[refseq_20GCF_5F000151885.1_202014-12-12]
65,193 sequences; 2,236,368,823 total letters
Query= NC_024150.1
Length=31709
Score E
Sequences producing significant alignments: (Bits) Value
seq4931 594 1e-165
>seq4931
Length=27746
Score = 594 bits (658), Expect = 1e-165
Identities = 1333/1988 (67%), Gaps = 47/1988 (2%)
Strand=Plus/Plus
Query 18890 GGAAATGTTAGCGCCATGGAAATTAACTTAAGGGCTAATTTGTGGAAAAGTTTTCTTTAT 18949
||||||||| ||||||||| ||| || ||| || ||||||| | |||||| |||
Sbjct 16526 GGAAATGTTGAATGCATGGAAATCAACATAGCGGCCAACCTGTGGAAGAATTTTCTGTAT 16585
Query 18950 TCAAATGTGGCTCTTTATTTGCCAGATTCTTATAAATTTACACCAGATAATATCGAAGTC 19009
|| ||| | || || ||| |||| ||| | |||| || || | ||| | | | |
Sbjct 16586 TCTAATATCGCGCTGTATCTGCCCGATAACTTTAAAACCACTCCCGCAAATGTGGTATTG 16645
Query 19010 CCAGACAACCCAAATACT-TATCAGTATATGAACAACCGCATCCCTTTTGGAAATCTAGT 19068
|| | | | | || ||| || ||||| ||||| || || ||| ||
Sbjct 16646 CCGCAGGATC-AGCGGCTATATGCTTACATGAATTCTCGCATTCCAGCCGGGGGTCTGGT 16704
Query 19069 TGATACTTATGTAAATATTGGTGCTAGATGGTCTTTGGATGCAATGGACACCGTAAACCC 19128
|| |||| | || || || | || ||||| | |||| |||||||| || || ||
Sbjct 16705 AGAGGATTATATCAACATAGGAACCAGGTGGTCAATAGATGTGATGGACACGGTTAATCC 16764
Query 19129 ATTTAACCATCATAGAAATGATGGACTATGTTATAGATCTCAACTGTTGGGAAATGGGCG 19188
|||||| ||||| |||||| ||| | | || || ||||| || || |||||||| ||
Sbjct 16765 ATTTAATCATCACAGAAATACTGGTTTGAGGTACAGGTCTCAGCTATTAGGAAATGGTCG 16824
Query 19189 GTACTGTAGTTTTCATATTCAAGTGCCGCAAAAATTTTTCGCGCTCAAAAACCTTCTTCT 19248
|| | ||||||||||| || |||||||| ||||| || || |||| | |||||
Sbjct 16825 CTATGCTTCCTTTCATATTCAGGTTCCGCAAAAGTTTTTTGCACTTAAAAGTTTGCTTCT 16884
Query 19249 TTTGCCCGGTTCTTATACTTATGAGTGGTCAATTAGAAAAGATGTAAATATGATACTACA 19308
| || || || || | ||| || ||||| |||||||||||||||| ||||| | ||
Sbjct 16885 GCTACCGGGATCGTACAGTTACGAATGGTCTTTTAGAAAAGATGTAAACATGATTTTGCA 16944
Query 19309 ATCAACATTGGGCAATGATTTAAGGGTGGATGGTGCTTCCATAACTTTTACAAGTGTTAA 19368
|| | ||||||||| | |||| ||| || || || |||| ||| || |||
Sbjct 16945 GAGTACTCTTGGCAATGATCTGAGGGAGGACGGAGCGTCAGTAACATTTGACAGCATTAG 17004
Query 19369 CCTCTTTGCTAGCTTTTTTCCAATGGCCCATAATACATGTTCAACACTAGAAGCAATGCT 19428
||| ||||||| || ||||| ||| | ||||| || ||| || || ||| | |||||
Sbjct 17005 CCTATTTGCTACTTTCTTTCCGATGTCTCATAACACTGCTTCTACTCTGGAAACTATGCT 17064
Query 19429 GAGAAATGATGTCAATGACCAATCTTTTAATGATTATCTATCCTCAGCG--AATATGCTT 19486
| ||||| || || || || || || || ||||| || ||||| || ||||||
Sbjct 17065 TCGCAATGAGGTTAACGATCAGTCCTTCGGCGACTATCTTTC--CAGCGTTAACATGCTT 17122
Query 19487 TTTCCAATTCCAGCAAACGCAACACAACTTCCTATTTCCATTCCTTCTAGAAACTGGGCT 19546
| | | ||||| | | |||| | | ||||| || ||||| | || || |||||
Sbjct 17123 TATGCTATTCCTCCGCATCAAACAACAGTGCCTATCTCTATTCCAGCAAGGAATTGGGCG 17182
Query 19547 GGATTTAGGGGGTGGAGTTTTACACGCCTTAAACAAAAAGAAACACCAGCTTTGGGGTCT 19606
| ||||| || ||| ||||| | || |||||| | ||||||||| | | || |||
Sbjct 17183 GCCTTTAGAGGTTGGGCATTTACTAGACTAAAACAACAGGAAACACCAACCATTGGCTCT 17242
Query 19607 CCTTTTGATCCTTATTTTACTTATTCAGGCAGTATCCCTTATTTGGATGGAACTTTTTAT 19666
| ||||| || || |||| || || ||| ||||| |||| ||||| || ||||||
Sbjct 17243 GCATTTGACCCATACTTTAGGTACTCGGGCTCAATCCCGTATTGGGATGCGACCTTTTAT 17302
Query 19667 CTTAGTCACACCTTTAGAAGGCTTTCAATTATGTTTGATTCATCAGTTTCATGGCCAGGA 19726
| |||||| | |||| | | | || ||||||||| ||||| ||||| |||
Sbjct 17303 TTATCTCACACTATCAGAAAGGTGGCCATACAGTTTGATTCTTCAGTAAGTTGGCCTGGA 17362
Query 19727 AATGATAGACTTCTTACACCAAATGAATTCGAAATCAAAAGGTATATTGATGGAGATGGT 19786
||||| |||||| | | ||| |||||||| | || ||||| | | || | || ||
Sbjct 17363 AATGACAGACTTTTAATACCTAATGAATTTCACATAAAAAGAGAGGTGGACGCGGAAGGC 17422
Query 19787 TACAATGTTGCTCAATGCAATATGACTAAAGATTGGTTTTTAGTGCAAATGTTGGCAAAT 19846
|| || |||| ||| || ||||| ||||||| | | | |||||| | || |
Sbjct 17423 TATAACACCTCTCAGAGCATAATTACTAAGGATTGGTATATGATTCAAATGCTCGCTCAC 17482
Query 19847 TACAACATTGGTTTTCAAGGCTATCATTTGCCCCCCGATCATAAAAACAGACTTTACTCT 19906
||||| || || | ||||| | ||| | ||| | ||| ||||| | ||| | || ||
Sbjct 17483 TACAATATCGGATACCAAGGTTTTCACCTACCCACAGATTATAAAGATAGATTGTATTCC 17542
Query 19907 TTTATGAGAAATTTTGAACCAATGACAAGACAAATTATTAATGAACTTGATGAAACAAAC 19966
||| | |||||||||||||| ||| |||||| || | || | || | | || |
Sbjct 17543 TTTTTAAGAAATTTTGAACCCATGTGTAGACAAGTTGT---GGATCCTGGTAAGACGGAA 17599
Query 19967 AAATATTTTGGTGTTAATGTTTTAAATCAACACAATTCTTCTGGATATACTGGTTTTAAA 20026
|||||| ||| | || | |||| || ||| || | |||||||||
Sbjct 17600 AAATATCAACCCGTTGCTCTTAAATATCAGCATAAT---------AATTCAGGTTTTAAA 17650
Query 20027 AGC------GCTGCCTTGGCAAGAGAGGGGCACCCATATCCAGCTAATTGGCCTTATCCC 20080
| | | |||| | || | || || || ||||| ||| ||||||| ||
Sbjct 17651 AACCATTATGGACCCTTTGGGCGACAAGGCCATCCTTATCCCTGTAACTGGCCTTTCCCG 17710
Query 20081 CTTATTGGAAATGAAGCAGTAAGCACTATTACTCAAAAGAAATTCTTGTGTGATAGAACT 20140
|| || ||| | | |||| | || |||||||| | ||||| || ||||| |||||
Sbjct 17711 CTCATCGGAGAACAGGCAGGTAAAACCATTACTCAGAGAAAATTTTTATGTGACAGAACA 17770
Query 20141 ATGTGGAGAATACCATTTTCTTCCAACTTTATGTCTATGGGTGCATTAACAGACTTAGGT 20200
||||||| || || || || |||||||||||||| ||||| || ||||||| | ||
Sbjct 17771 CTGTGGAGGATTCCGTTCTCCTCCAACTTTATGTCCATGGGAACACTAACAGATCTGGGA 17830
Query 20201 CAGAATTTGCTTTATGCTAATGCGGCACATGCTTTGGACATGGTTTTTGAAGTTGACCCA 20260
|| |||||||| ||||| ||| | || |||||||| |||||| | ||||| || ||
Sbjct 17831 CAAAATTTGCTATATGCAAATTCAGCTCATGCTTTAGACATGACAGTCGAAGTAGATTCA 17890
Query 20261 ATAGATGAACCCACCCTTCTCTACATTCTTTTTGAAGTGTTTGACGTCTGTCGCATCCAT 20320
|| || ||||| || |||| || || |||||||| |||||| | || | | |||
Sbjct 17891 ATGGAGGAACCAACTTATCTCATGATGCTATTTGAAGTATTTGACATGTGCAGAGTGCAT 17950
Query 20321 CAACCACACAGGGGCGTAATTGAAGCAGTCTACCTAAGAACCCCATTTTCAGCTGGAAAC 20380
|| || || | || || || |||| | || ||||||||||| ||||| || || |||
Sbjct 17951 CAGCCTCAACGAGGTGTCATAGAAGTTATTTATCTAAGAACCCCCTTTTCGGCAGGTAAC 18010
Query 20381 GCCACCACATAA--ATGGGTTCCACTGAAGATGAGCTGCATTGCATTATTAAAGATTTAA 20438
||| | |||||| ||||| || | || || || | | | ||||| ||||| |
Sbjct 18011 GCCGCAACATAAATATGGGGACCTCAGAGGACGAAATAAAACGAATTATCTCCGATTTGA 18070
Query 20439 AAATACAACCATATTTTTTAGGTGTTTATGATAAAAGATTTCCTGGGTTTATTAATAAAC 20498
| | ||| | |||||| ||| ||||||||| | ||||| |||||||| ||
Sbjct 18071 ATGT---ACCTTGTTTTTTGGGTACCTATGATAAACGCTTTCCGGGGTTTATCCGAAAGG 18127
Query 20499 ATAAAATTTGTTGTGCAATTATAAACACCGCTGGC--AGAGAAACTGGGGGAATGCATTG 20556
| | | || ||||| ||| ||||||||| ||| | ||| || || | |||||
Sbjct 18128 ACAGGTTATGCTGTGCCATTGTAAACACCG--GGCTTCGCGAAGAGGGCGGTGTCCATTG 18185
Query 20557 GCTTGCTTTAGGTTGG-TTCCC---ACCAAAACAACTTTTTTACTTGTTTGATCCTTTTG 20612
| |||| || | |||| |||| | |||||| |||||| |||||||||| || |
Sbjct 18186 GATTGCGTTTGCTTGGAATCCCTATATTAAAACA----TTTTACATGTTTGATCCATTCG 18241
Query 20613 GCTTTTCTGATGCAAAATTAAAGCAAGTATACAATTTTGAATATCAGGGGCTTTTAAAAA 20672
| || || ||| | | || || |||| ||||| || |||||| || | | ||| |||
Sbjct 18242 GATTCTCGGATCAAGATTTGAAAAAAGTTTACAACTTCGAATATGAGCGAATGTTAGAAA 18301
Query 20673 GAAGCGCGCTTTCATCTTCTCCAGA--TAAATGTGTTACCTTAATTCAAAGTAAAGAAAC 20730
||||| | | ||| | | | | ||||||||||| | || || || |
Sbjct 18302 ACAGCGCAGTAT--TCTCCACAAAAACCAAATGTGTTACTGTCATAAGCAGCTGTCAATC 18359
Query 20731 TATACA-AGGGCCAAATAGCGCCGCTTGTGGTTTATTTTGCTGTATGTTTTTACATGCTT 20789
| || || || | | || || || ||| | ||||| ||| | ||||| | || |
Sbjct 18360 GGTGCAGAGTCCCTACAATGGCTGC-TGCGGTCTGTTTTGTTGTGTCTTTTTGAAAGCCT 18418
Query 20790 TTATAAACTGGCCTTTAAATGCCATGAATAATAACCCAACTATGGATTTATTGACAGGAG 20849
||| | | ||| || | ||| |||| ||||||| ||||||||||| ||||| |
Sbjct 18419 TTACTATGTATCCTCATTATCCTATGGATAAGAACCCAATAATGGATTTATTTACAGGTG 18478
Query 20850 TTTCAAAT 20857
| |||||
Sbjct 18479 TGGCAAAT 18486
Score = 297 bits (328), Expect = 4e-76
Identities = 900/1379 (65%), Gaps = 40/1379 (3%)
Strand=Plus/Plus
Query 6026 ATTTGATCAGCAAATACAATTGTTTTATTATCTAATTTAGTTGCAAATGATCCATATAAA 6085
|||||||| | ||| | ||| ||||||||||||| | || ||||| || || || |
Sbjct 5574 ATTTGATCCGGAAACAGTATTTTTTTATTATCTAACCTGGTGGCAAAGGAACCGTACAGT 5633
Query 6086 GCATTTGACAAAAGTTTGGCAATACTGCGTATTGTTTGAtttttt--tCTTTATCTGCTT 6143
|| |||||||| ||||| || || || || ||| || | || | | ||| || ||
Sbjct 5634 GCGTTTGACAACAGTTTAGCGATGCTTCG--CTGTGTGCTGTTGTGGTTTTTTTCCGCGG 5691
Query 6144 TTTCTTTGGCCGCTATATTTAATTG-TACATATTCTTTAGCAATACATTTCCATTTTGGC 6202
||||| ||||||||| ||| | | ||| |||||| | || | || ||||| ||
Sbjct 5692 CCTCTTTTGCCGCTATA-TTAGTGGCTACGTATTCTCTTGCCACGCAATTCCA--CTGCT 5748
Query 6203 CATATA--ATAGTTCTTTCATCTGGAATAATGTTAACTTCCCACCCTCTATTATGAAGAG 6260
|| ||| || || |||||||| | | ||| | ||| |||| |||||| | ||
Sbjct 5749 CAAATACTGTAACTCGCTCATCTGGGACCAACCTAATCTTCCATCCTCGATTATGCAAAG 5808
Query 6261 TTATTACATCAATTGATGTTGCTATTTCTCCACGCAGCGGTTCATTGGTCCAGCATAATC 6320
| || |||| || || || || ||| || | | |||||| |||||||| | |
Sbjct 5809 TAATGGCATCGATGGACGTGCATACTTCGCCTCTTAAATTTTCATTTGTCCAGCAAAGAC 5868
Query 6321 TTCCGCTTTTGCGTGAACAAAAAGGTGGTAAAATATCTAACATTGTTTCATCAGGTGGGG 6380
|||| ||| | |||||||| || ||||||| |||||| | ||| |||| | |
Sbjct 5869 GCCCGCCTTTTCTCGAACAAAATGGCGGTAAAACATCTAAGTATTCTTCGGCAGGGGCGT 5928
Query 6381 TGGCATCAATTGTAAAAATTCCTGGTAATAAATGTTTGTCAAAATAATCGATTTGATTTT 6440
||||||||| || ||| | ||||| | ||||||||| || |||
Sbjct 5929 CAGCATCAATTACAACAATGGCCGGTAACAGGGCAGGGTCAAAATAGGAAAT----TTTG 5984
Query 6441 TTA---GTTTTAACATGTTTT-CCCAGTCTTTAATTGCTAAGGTTCTATCAAAAGGGTTA 6496
| | ||| || ||||| | | | | || ||| |||| ||||| || |||
Sbjct 5985 TCACCGGTTGCAAAGCGTTTTGAATACTGATAGAGAGCCAAGTTTCTGTCAAAGGGATTA 6044
Query 6497 AGGGGCCTGCCTGAAGGAAATGGATGAGTAAGTGCGCTTGCATACATGCCACAAATGTCA 6556
|| || ||| | || | ||||| || | |||||| |||||||| || |||| |||
Sbjct 6045 AGTGGTGGGCCAAAGGGCATGGGATGCGTTAATGCGCTGGCATACATTCCGGAAATATCA 6104
Query 6557 TAAACATATAGTTTTTGCTCTAATACACCAAGGTAAGTTGGGTAACACCTTCCACCTCTA 6616
|||||||| | || ||| || ||||| | |||||| ||||| |||| ||| |||||
Sbjct 6105 TAAACATAAATAGGTTCCTCAAAAACACCTATGTAAGTGGGGTAGCACCGTCCCCCTCTG 6164
Query 6617 ATGCTTTCTCTAATATAGTCATATAATTCACATGAAGGAGCTTGAATAACATCTCCTAAA 6676
||||||||||| | | | ||||| | || ||| || || ||| | || |||
Sbjct 6165 ATGCTTTCTCTTACAAAATCATAAATGTCGTGTGACGGGGCCAGAAGAGTATTCGACAAA 6224
Query 6677 TTGGGTTTATTTGGTTTTTCCGCTCTATATAAAATTTGTCTAAAAATAGCATGAGAATTT 6736
| |||| | | |||| | || | | | ||| ||||||| ||| |||||||
Sbjct 6225 TGATGTTTTTCTAACTTTTGAGTCTTAAACACCAGTTGCTTAAAAATTGCAAAAGAATTT 6284
Query 6737 GAACTAATAGTTGGTCGCTGTAAAATATTAAAATTTGCATTTGGTAAATTTACGGCCTCT 6796
|| ||||| ||||| ||||| |||| ||||||||| | | | || | | | |
Sbjct 6285 GAGCTAATTGTTGGACGCTGAAAAACATTAAAATTACAAGCTATCATATGCAAGCTTTTT 6344
Query 6797 GTTATAAATTTTNNNNNNNNNNNNNNNNNNNNNAATACCAATTCTGCAGTTACTTTAACA 6856
|||||| ||| ||| |||| || ||| || |||||
Sbjct 6345 TGTATAAAGTTTAAATATGAATCATACAGACAATGTACTAATTGTGAAGTAACAATAACA 6404
Query 6857 TCTAAGGCGCAATAATTTAGGGTTTGTTCAATAATATCATATTCTGTGTTTTGT---TTT 6913
||| | ||||| | | || ||||| ||||| | | || ||||| ||
Sbjct 6405 TCTTGAACACAATATGCCAAAACATTTTTTATAATGTCATAATTTTTGATTTGTGAACTT 6464
Query 6914 TTCCATATAGTTTTATTTTCTTCATATTCTTGTTGACTTTCCCAATACTTGGCTTGAGGA 6973
||||| | | |||||| || |||| || |||||||| | | | |||
Sbjct 6465 TTCCACAGATCTTTATTAAAAGTGTACTCTTCTTCGGAATCCCAATAAGCGACGTCTGGA 6524
Query 6974 AAACCATCATCATCTTGTTGGTAAGAACCTAGCATATAAAATTCATTAACTGCCTTATAG 7033
|| || || | |||| |||| || ||| |||| |||||||||| | || || ||
Sbjct 6525 AATCCGTCTTGATCTACCAGGTAGGATCCTTTCATAAAAAATTCATTTATGGCTTTGTAA 6584
Query 7034 GGACAATTTCCTTTTTCAACACTTAAATCATAAGCATTGGCTGCTTTTCTTAAACTAGTG 7093
|| |||| || ||| | | |||||| ||| || | ||| || ||||||||||| |||
Sbjct 6585 GGGCAATAACCCTTTGTAGCTTTTAAATTATAGGCTTCGGCCGCCTTTCTTAAACTGGTG 6644
Query 7094 TGGGTTAAAGCAAAAGTATCTCTTACCATAAATTTTACAAACTGATATTTAAAATCACTT 7153
|||||||| || ||||| | ||||||||||||||||| |||| || | || |
Sbjct 6645 TGGGTTAATTGGAATGTATCACGGACCATAAATTTTACAAATTGATGTTGCATGTCGGAT 6704
Query 7154 TC-TTCACATATTCCTTCTTCCCATACTTTATAATCTTTTCTTTTTTGATAAAA---AGG 7209
| | || ||| || |||| ||| | | ||| || ||||||| | ||| ||
Sbjct 6705 GCGGTTAC-TATGCCCTCTTGCCAAGCAGCAAAAT-TTGGCTTTTTT--TCAAACTTTGG 6760
Query 7210 GTTTGGCAAAGAAAAAGTAATATCATTAAATAATATTTTACCACATCTGGGCATAAAATT 7269
|| || |||| | || |||||||||||||| |||||||| |||||| | |||| |
Sbjct 6761 ATTAGGTAAAGCTATGGTTATATCATTAAATAAAATTTTACCGTTTCTGGGTA-AAAAAT 6819
Query 7270 TCTATTTATCTTAAAAGGAGATGGAATTTCTGAT-----TTATTATTAATTACTTGAGCA 7324
|| | | || |||| || | | | ||| ||| | || | ||| |||||
Sbjct 6820 TCCGTCTCACTAAAAAACAGTCG----TCCAGATCATTGTTAGTGTTTAATACCTGAGCG 6875
Query 7325 GCGAGAACTATTTCATCAAATCCATTAATATTGTGACCAATTATATAAACTTCAATAAA 7383
|| || || |||||||||||||| || || ||||| ||||| | ||| | ||| |||||
Sbjct 6876 GCAAGCACGATTTCATCAAATCCGTTTATGTTGTGTCCAATCACATATATTTC-ATAAA 6933
Score = 284 bits (314), Expect = 2e-72
Identities = 623/917 (68%), Gaps = 31/917 (3%)
Strand=Plus/Plus
Query 3864 ATTAATA---AATAAATACAATAAAATTTGGATTGATTTGAAAATTTTTATTTGTTGCGT 3920
||||||| || |||| |||||||| || |||||||| ||| || ||| |
Sbjct 3419 ATTAATACCAAAAAAATCAAATAAAAT-------GAGTTGAAAATGTTTTTTATTTGTGA 3471
Query 3921 TTTTCTTGATAGTATTTATTCCATCGTTTTCTGTCAGATAATA-CTTTGTGTATTTTTTC 3979
|||| | || ||| | ||||||| | | |||| ||||| | ||||||||||
Sbjct 3472 TTTT---GGTAATATCTGATCCATCGCTCACGGTCAC-TAATAACACGGTGTATTTTTAG 3527
Query 3980 CAATACAGAATAAAGCAAACTTTGTACATTTAAATACATAGGCATAAGACCTTCAGAGGG 4039
|| | ||| || | | || ||||||||||||||||| | | |||| | |
Sbjct 3528 TAAAATTTCATATAGTTTAGTCTGAACATTTAAATACATAGGGGTCAA---TTCACATTG 3584
Query 4040 ---GTGCATATACATCCATTGCAGGGAATCATGAGGAGGAGTTGTTTGATAAATAATCCA 4096
| ||||||||||||||| | | | | ||| || || || | |||||
Sbjct 3585 CGCGCTCATATACATCCATTGTTGACTTTGACACGTAGGGGTGGTGGTGTACACGATCCA 3644
Query 4097 ATCATATTTAGAATGAAGGTTATTAAAATTAAAAATATCTTTAAGTAGCAGAGATATAGC 4156
|||||| || || | | || | ||| |||||||| | || || | || ||
Sbjct 3645 ATCATAAGATGAGTGTAAGGAATGGTAGGCAAAGATATCTTTTAATAATAGGGTGATTGC 3704
Query 4157 AGTTGGTAAACCTTTAGTGTAAGAATTAATGAATCTATTTATTTGCCCCGGCTGCATTTT 4216
|||| |||||||| |||| |||||| ||||| |||| || | || ||||||||
Sbjct 3705 TAAGGGTAGGCCTTTAGTATAAGTATTAATAAATCTGTTTAGCTGAGCGGGTTGCATTTT 3764
Query 4217 TGGGCTCATTATGTGCATTTTAGCTTGTATTTTTAAGTTTGATATATTTCCACCTAAATC 4276
||||||| ||| || ||||||||| ||||||| | ||||||||||||| ||||||
Sbjct 3765 GGGGCTCAGTATATGATATTTAGCTTGAATTTTTAGTGTGGATATATTTCCACTTAAATC 3824
Query 4277 TCTTCTGGGATTCATATTATGTAACACTACTAAAAGAGTGTAACCAGTACATTTAGGATA 4336
| ||| || |||||||||||||| || || || ||| ||| || | || |||||
Sbjct 3825 TTTTCGCGGGTTCATATTATGTAATACCACAAACAGATAGTACCCGCTGCACGAGGGATA 3884
Query 4337 TTTATCATGTAATTTTGATGGAAAGGCGTGAAAAAATTTTG--ATACTGGATGACCATCA 4394
||| ||| || |||||| ||||| |||||||||||||||| ||| || || | |
Sbjct 3885 TTTTTCAAATAGTTTTGAAGGAAACGCGTGAAAAAATTTTGCAATA-GGGCTGTTC-CCT 3942
Query 4395 CCAATATCTTCCATGCATTCATCTAAAATAATAGCAATTGGCCCATTTTTTGCAGCTGAG 4454
|| | || |||||| || ||||| | ||||| || || || || |||| || ||
Sbjct 3943 CCTAAATTTTCCATACACTCATCAATGATAATGGCTATGGGTCCGGTTTTGGCCGCCTGT 4002
Query 4455 GCAAAAATGTTATTTGGGTGGGAAACATCATAATTATATTC-TTGAAGCAATTCGGTATA 4513
|||| | |||||||| || | ||||||||| | ||| || ||| | || | ||
Sbjct 4003 ACAAATTTATTATTTGGATGCCCTAAATCATAATTTTCTTCGTTTAAG-AGATCCTTGTA 4061
Query 4514 AGGTAGTTTTATAAATTTTGGTGTTAATGTACCACTTCTAGGTA-TATAGGTGCCTTCTG 4572
| ||||| ||| || |||||||||||| | ||| | || | ||||
Sbjct 4062 CGATAGTTGCGCGAATCGAGGAGTTAATGTACCAGTCTGAGGCACAATTTCACCATTCTT 4121
Query 4573 GCCCTTGGTTATAATTTCCTTCATAAATTTGTGTTTCCCACGCAAGCATTTCTTGTGGAG 4632
||| | |||||| ||||| || |||||||| || ||| | | ||||| ||||| |
Sbjct 4122 TCCCAT-GTTATAGTTTCCCTCTATAATTTGTGCTTTCCATGACATAATTTCCTGTGGGG 4180
Query 4633 GTATCATGTCAATATTTGGAGCAACaaaaaaaaTAGT-TTCTGGTTGGGGGTTAATAAGA 4691
| |||||||| || || | ||||| || ||||| | | || ||| |||||||
Sbjct 4181 GGATCATGTCTGCATAAGGGGTTACAAAGAATATAGTCTCCGGGGCGGGATTTAATAATT 4240
Query 4692 TGTGATGAAAGTAAATTACGTAATAATTGAGATTTTCCACAACCAGTGGGACCATAAATA 4751
|| || || | | ||| | |||||||| |||||||||| |||||| |||||||| ||
Sbjct 4241 TG-GACGACATAAGATTTCTCAATAATTGGGATTTTCCACTACCAGTTGGACCATATATG 4299
Query 4752 ACTCCAATAACTGGCTG 4768
|| ||||| || || ||
Sbjct 4300 ACCCCAATCACCGGTTG 4316
Score = 246 bits (272), Expect = 6e-61
Identities = 496/722 (69%), Gaps = 18/722 (2%)
Strand=Plus/Plus
Query 12998 GCTCCTACCGAGGGAAGAAATAGCATACGTTATACTCAATTTGCGCCTTTGTATGATACA 13057
|| || || |||||||||||||||||| |||| | | || | | || | ||||||
Sbjct 12037 GCGCCGACTGAGGGAAGAAATAGCATAGTTTATTCACCTTTACCTACGTTACACGATACA 12096
Query 13058 ACAAAAATTTACCTTGTGGACAACAAATCTGCGGACATACCATCTCTCAATTATCAAAAT 13117
|| ||||||||| || | || |||||| | | ||||| | || || |||||||| ||
Sbjct 12097 ACGAAAATTTACTTTATCGATAACAAAGCATCCGACATCTCTTCCCTAAATTATCAGAAC 12156
Query 13118 GACCATAGCAGTTTTTTAACCACAGTAATACAAAACAGTGATTTTACTCCTTTGG-AGGC 13176
|| ||||| | |||||| | || || ||||| ||||||| ||| ||| ||||
Sbjct 12157 GATCATAGTTTATATTTAACATCCGTCATTCAAAATCCGGATTTTAATCCCCTGGAAGGC 12216
Query 13177 -TGGCACACAATCA-ATTAATTTAGATGAAAGATCTAACTGGGGAGGGGAGTTTAAAACA 13234
|| || |||| || || |||||||||||||||| ||||| || | || |||||
Sbjct 12217 ACGGGAC---ATCAGATAAAATTAGATGAAAGATCTAGATGGGGTGGTAATTTAAAAACC 12273
Query 13235 TTGTTGCATATGAATATGCCAAATATTACACAATATATGTATAGTAATTCTTTTAAGGTT 13294
| ||||| || || |||||||| || | || |||| |||||||||||||| |||
Sbjct 12274 ATTCTGCATTCAAACATACCAAATATAACCGAGTACATGTTTAGTAATTCTTTTAGAGTT 12333
Query 13295 AAACTAATGTCATCAAATA-TTAATGGTGTAAAAAAG-TATGAATGGTTTGAACTATCAA 13352
|| || | ||||| | || | || | | ||| ||||||||| | ||| | |
Sbjct 12334 AAGATACCCAC-TCAAAAAGTTGACGG-GCATTTAAGATATGAATGGGTGACTCTAACCA 12391
Query 13353 TTCCAGAGGGGAATTATAC---TATTGCAAAAGTTATTGATTTAATGAATAATGCAATAG 13409
| || || || |||| | | ||| | ||||| ||||| ||||| |||| ||
Sbjct 12392 TACCCGAAGGAAATTTTTCGGAGATT---ATGGTTATAGATTTGATGAACGATGCCATTA 12448
Query 13410 TAGATAATTATTTAAAAGTTGGTAGACAAAATGGTGTAAAAGAAGAAGATATTGGAGTGA 13469
| | ||||||| ||| || | ||||| || ||||| || || || || |
Sbjct 12449 TCTCTCATTATTTGTCTAATGGCAGGTTACGCGGTGTTAATGAAGATGAAATAGGTGTTA 12508
Query 13470 AAATTGACACAAGGAATTTTATGCTTGGTTTTGATCCCATTTCTAAATTAATTATGCCTG 13529
| | ||||| || ||||||| | |||| ||||||| || ||| ||||| ||||| |
Sbjct 12509 AGCTGGACACTAGAAATTTTAAAATGGGTTATGATCCCTATTATAAGTTAATCATGCCCG 12568
Query 13530 GTGTTTATACATATGAAGCTTATCATCCAGATATTATTCTTTTG-CCGGAATGTGCAATT 13588
| | ||| ||||||||| | |||||| || | | |||| | || | ||||| |||
Sbjct 12569 GCATGTATCTATATGAAGCATTTCATCCCGACGTGA-TCTTAAGTCCACACTGTGCTATT 12627
Query 13589 GATTTTACCAATTCAAGACTAAATAATTTGCTTGGTATACGaaaaaaaTACCCATTTCAA 13648
||||||| ||| ||| |||||||| | | |||||| |||||| || |||| |||
Sbjct 12628 GATTTTAGCAAAAGTAGATTAAATAATCTATTGGGTATAAGAAAAAGATTACCATATCAG 12687
Query 13649 CAAGGGTTTATAATAGATTATGACATGTTAAAAGGTGGCAACATTCCAGCTCTTTTAGAT 13708
| | ||||| || |||||| ||| ||| || || ||||| ||||| |||||
Sbjct 12688 AAGGATTTTATTATCACTTATGATGATTTAGTAGGGGGAAATATTCCCGCTCTATTAGAC 12747
Query 13709 TT 13710
||
Sbjct 12748 TT 12749
Score = 206 bits (228), Expect = 5e-49
Identities = 285/396 (72%), Gaps = 2/396 (1%)
Strand=Plus/Plus
Query 18195 TTTATATGGAAGATGTTGATTTAAAAACACCAGATACTCATTTGGTTTATAAAGCCTCTC 18254
||||| |||||| | ||| || || | ||||||||||| || || || ||||| ||||
Sbjct 16041 TTTATGCAGAAGATTTGGATATACAAGCTCCAGATACTCACTTAGTGTACAAAGCATCTC 16100
Query 18255 CTCAAGATGCTCAA-ACTCAAAATGGAATGGGCCAACAAGCAGCACCTAATAGGCCAAAC 18313
| ||| || |||| || | | || ||| || || || ||||||||
Sbjct 16101 CCGGGCATGAAAAAGACTCTCT-TGCCCTCGCTCAGCAAAGCGCGCCAAACAGGCCAAAT 16159
Query 18314 TATATTGGTTTTAGGGATAATTTTATTGGTTTGCTTTACTATAACAGTAATGGAAATTTG 18373
||||| |||||||||||||| ||||| || || | | |||||||||||| | ||||||
Sbjct 16160 TATATAGGTTTTAGGGATAACTTTATCGGGTTAATGTTTTATAACAGTAATAGCAATTTG 16219
Query 18374 GGTGTTTTGGCTGGTCAGGCATCACAACTAAATGCTGTAGTTGAATTGCAAGACAGAAAC 18433
||||| || || ||||| | ||||| || |||||||| | || | |||||||||||
Sbjct 16220 GGTGTATTAGCCGGTCAATCGTCACAGCTTAATGCTGTCATCGACCTTCAAGACAGAAAT 16279
Query 18434 ACTGAACTTTCTTATCAACTTTTGCTAGATACTATCAGTGATCGACATCAGTATTTTTCA 18493
|| ||| | || ||||| ||| || |||||| | | ||| || || ||||
Sbjct 16280 ACAGAATTGTCATATCAGCTTATGTTAGATAATTTACACGATAGAACTCGATATTACAGC 16339
Query 18494 ATGTGGAATCAGGCTGTAGACAGTTATGACCCTGATGTGCGAATCATTGATAACAGGGGT 18553
|||||||||| || || || ||||| || || || |||||||| || || | ||
Sbjct 16340 TTGTGGAATCAAGCCGTGGATTCATATGATCCAGAGGTCCGAATCATAGACAATATTGGA 16399
Query 18554 GTAGAAGATGAACTTCCAAATTATTGTTTTCCTTTA 18589
|||||||| ||||||||||||||||| ||||| |||
Sbjct 16400 GTAGAAGACGAACTTCCAAATTATTGCTTTCCGTTA 16435
Score = 192 bits (212), Expect = 1e-44
Identities = 274/386 (71%), Gaps = 0/386 (0%)
Strand=Plus/Plus
Query 17414 AAGATGGCGGCTCCTTCGATGATGCCTCAATGGTCTTACATGCACATCGCCGGGCAGGAT 17473
|||||||| |||| |||||| | || |||||||||||| | || ||||| || || |||
Sbjct 15311 AAGATGGCCACTCCCTCGATGCTCCCGCAATGGTCTTACTTACATATCGCAGGACAAGAT 15370
Query 17474 GCATCGGAATACCTGTCCCCCGCTTTGGTGCAGTTTTCTCAAGCTACAGAAACATACTTT 17533
|| || ||||| | || || || ||| || ||| | || || ||||| ||||||
Sbjct 15371 GCTTCAGAATATTTATCTCCTGCGTTGTGTCAATTTGCAAGCGCAACCGAAACGTACTTT 15430
Query 17534 CAAATTGGGAATAAGTTTAGAAACCCAACGGTGGCCCCCACTCATGATGTGACCACTGAG 17593
| | |||| |||||||| || ||||| || || || || ||||| || || ||
Sbjct 15431 TCCCTAAGCGATAAATTTAGAAATCCGACGGTTGCGCCGACACACGATGTAACTACGGAA 15490
Query 17594 AGGTCACAACGTCTTCAACTACGCTTTACCCCAGTGACACAAGAAGATACTCAATATGCT 17653
|| || || | || ||| || | ||| |||| | | |||||||||| || ||| ||
Sbjct 15491 AGATCGCAGAGACTACAATTAAGATTTGTTCCAGCGGAAAAAGAAGATACACAGTATACT 15550
Query 17654 TACAAAGTGCGGTTTCAACTTACTGTGGGAGATAACCGCGTCTTGGATATGGGAAGTACC 17713
| |||| || |||||||| || || || |||||| | | || ||| |||| ||||
Sbjct 15551 TTTAAAGCCCGATTTCAACTCACCGTCGGTGATAACAGAATATTAGATTTGGGTAGTAGT 15610
Query 17714 TATTTTGACATCCGCGGACGTTTGGACAGGGGCCCCTCTTTTAAGCCCTATAGTGGAACA 17773
|||||||| || ||| | ||||| || ||||||||||| || || ||||| |||
Sbjct 15611 TATTTTGATATAAAGGGAAAGATAGACAGAGGTCCCTCTTTTAAACCTTACAGTGGCACA 15670
Query 17774 GCATATAATGCAATGGCCCCCAAATC 17799
||||| ||| | ||||| |||||
Sbjct 15671 GCATACAATAACCTTGCCCCGAAATC 15696
Score = 143 bits (158), Expect = 5e-30
Identities = 210/297 (71%), Gaps = 0/297 (0%)
Strand=Plus/Plus
Query 10699 TTAAAAGAAAGTCTTTTAAATATTACTGAGCCGGAAAGTAAATGGTTGGTTGATTTAATT 10758
|||| ||||||||||||||| || | |||| | |||| || ||||| || ||| | ||
Sbjct 10150 TTAAGAGAAAGTCTTTTAAACATCAATGAGGCCGAAAATAGGTGGTTAGTGGATATGATA 10209
Query 10759 GATGTATTACAAAGCATAATAGTGCAAGAAAGGCATTTAAAAATTGCTGAAAAGGTTGCC 10818
|||| | || | ||||| || |||||||| || | || | ||| ||||| |
Sbjct 10210 AATGTTCTTCAGACAATAATTGTTCAAGAAAGACAAATGGGTATCGGTGAGAAGGTATCG 10269
Query 10819 GCCATTAATTTTTCAGTATTTCAATTAAGTAAATTTTATGCACATAAAATTTTTCATACT 10878
|| ||||| | |||||| | | ||||||||||||| ||||||| | | ||
Sbjct 10270 GCTATTAACTATTCAGTGATGACTCTGGGTAAATTTTATGCTAGGAAAATTTATAACGCT 10329
Query 10879 CCTTTTGTTCCTTTAGATAAGGAATTAAAAATATCAACCTTTTATATGAGGGCTGTTATA 10938
| |||||| || |||||||| | ||||||| ||| |||| |||||| ||| ||
Sbjct 10330 CGTTTTGTACCATTAGATAAAGTGGTAAAAATTGAAACATTTTTTATGAGACTTGTCATG 10389
Query 10939 AAAATATTGATTTTAAGTGAAGATTTGGGAAACTATAGAAATCAAAAAATGCAAAGA 10995
| || || | |||||||| | ||||||||| ||||||||||| | |||| |||
Sbjct 10390 CAGATCTTAACTTTAAGTGTAAATTTGGGAATGTATAGAAATCAGCAGCTGCAGAGA 10446
Score = 118 bits (130), Expect = 2e-22
Identities = 379/571 (66%), Gaps = 24/571 (4%)
Strand=Plus/Plus
Query 9595 AAAGGCCTTAATAAAGCTAAATCTGCTACAACCCGTTCCGCCAAAATTGATTGTTGCATT 9654
|| || | ||||||||| | ||| ||| || | |||||||| || ||| || ||
Sbjct 9089 AACGGGCGTAATAAAGCAAGATCGGCTGTTACTCTGTCCGCCAAGATACTTTGCTGTATC 9148
Query 9655 TGTTGTAATGTTTCACCCATATTATCAAAATCTAAAAATCTATTGTATGCGCCGGTGTTT 9714
|| | ||||||| | | ||| |||| || ||||| || | || || || || ||
Sbjct 9149 TGCCTCAGTGTTTCATCAAAATTGCCAAAGTCCAAAAACCTGTGATAAGCTCCAGTATTG 9208
Query 9715 ATGGTATAAGAACAATTTGTCATAACAGACCAAT---TAATTCCCTGAAAAAGACGGTGT 9771
| ||| ||||| || || | |||||||| ||||| |||| | ||| |
Sbjct 9209 ACCACATAGGAACATGTTCCCACCATAGACCAATCCATAATT---TGAAGCATT-GGTCT 9264
Query 9772 TTTAC-TTCATGATATTGGATTCTACTATAAGCCCTAGTATCAAAAATATAATCATTACA 9830
| || || | ||||| ||| | ||| ||| ||| |||||| | ||||||||||||
Sbjct 9265 TGTATATTGTTCATATTTGATATTGCTAAAAGTCCTCTCATCAAATACATAATCATTACA 9324
Query 9831 GATTTTTACTAATGT--TTGATATCCAATTAAAAAATGTGGCGGCGGTAGGCCATA-ACA 9887
|| ||| || ||| ||| ||||| | |||||||| || || || | |||| | |
Sbjct 9325 CTTTCTTAATA-TGTAATTG-TATCCTAACAAAAAATGAGGTGGTGG--GTACATATATA 9380
Query 9888 AGGCCAGTTGTTTACTGCAGGCTGGCGAATTC---CTAGATTGTGTAGCATTAAACGAGG 9944
||| | ||| | || || | | || | | ||| ||||| | |
Sbjct 9381 AGGGCCAATGT--AATGTTGGAGGACTTCTTGGGGCCAAATTTAAAAGCATAGTTCTTTG 9438
Query 9945 ATAATGGTAAATATATCTTGACATCCACGTAACACCATTGGCTGTTATTGAAGCTCTAGC 10004
||||| || ||||| | |||||||| | | |||| | ||||| || || | |
Sbjct 9439 ATAATCATAGATATACGTAGACATCCATTTTAAACCAGCGCTAGTTATGGATGCCCGTGT 9498
Query 10005 ATAGTTTCTGA-CTTGATTCCAAATATTTCGTAGAGGTTGAAATATTTCCATCGTTTGCA 10063
||||| ||| | | |||||||||||||| | ||| |||| | |||||| || || |
Sbjct 9499 CCAGTTT-TGAGCATTGTTCCAAATATTTCGCTGCGGTCGAAAAAGTTCCATAGTATGAA 9557
Query 10064 AGTTTTGTCCCGTAAGGCGGGCGCAGTCATAAGCACTCTG-AAAGAA-AAATATAACCTT 10121
| ||||||| ||||| || || || || | ||| |||| |||||| | |||| |||||
Sbjct 9558 CGGTTTGTCCAGTAAGTCGCGCACACTCCAATGCATTCTGAAAAGAAGACATATGACCTT 9617
Query 10122 TCAGATGCATCCAGCGTTGCGGCAGATGAAA 10152
|||||||||||| | | || || ||||||
Sbjct 9618 TCAGATGCATCCTGTACTTCGACATATGAAA 9648
Score = 116 bits (128), Expect = 7e-22
Identities = 524/814 (64%), Gaps = 51/814 (6%)
Strand=Plus/Plus
Query 8374 ACTCGCCTGTTGATGTCTTGAATT-CTTTGATTCTGAGTGAAAACCACCGGCCCTGTTGT 8432
|||| || || |||| |||||| || || ||||| | ||| | ||||| || ||
Sbjct 7889 ACTCTCCGATTTATGTTCTGAATTTCTCTG-TTCTGGGAGAATATTACCGGACCCGTCAC 7947
Query 8433 TTTGAACCTAAAAGAAATTTCAATAGAATCAATTTCTGCATCATTAATTGCAACTTGTCG 8492
|||||| || ||||| | ||||| |||||||||||| ||||||||| ||| |||
Sbjct 7948 TTTGAATCTGAAAGATAATTCAACAGAATCAATTTCCATATCATTAATGTTAACCTGTTC 8007
Query 8493 CAATATTTCGGTTATATCCCCACTATTTTCTTGATAAGAAATATCTGCCATAAATTGATC 8552
| ||| || || | || |||||||||||| | || ||||| ||||| ||||
Sbjct 8008 TAGTATATCTTGAATGCCTCCGCTATTTTCTTGAAATGATATATCACTCATAAGCTGAT- 8066
Query 8553 AACTTCTTCATCTTCCATTTCTCCCTGACCAGCTCTTTCTATAGTGGCTGCTAGGTCAAC 8612
|| || || | | | | | |||||| ||| | | || | || |||
Sbjct 8067 --CTAGGTCCTCGGCAGTGTGTTGATTTTCAGCTCGTTCCACAATGCCGCTTAAATCACG 8124
Query 8613 ACTTATTCGACGCATTAAATTA-ACAAAAGCT--TGAAGTCCATGTTCATGCCATACTCT 8669
| | ||||| | || ||| | | || ||| ||| ||||| | | ||| | |||
Sbjct 8125 AGTGATTCGCCTCA-TAAGTGAGGTGAATGCTCCCGAA--CCATGGTTGTTCCACAGTCT 8181
Query 8670 GTTATAAACAATTTGACCTTGATCAGTCCTAGCTCTTAAAATTACTTGAGCTAAATTTAA 8729
| || | | | | |||| ||| | | ||||| | |||||||||||||||||| |
Sbjct 8182 GGTAAACATTACTCTCCCTTCATCTGATCGGGCTCTCAGAATTACTTGAGCTAAATTAAC 8241
Query 8730 TTCAACATGTCTA--------GCTAGTACCCGCTGATTCAAAGCATGATTTAAATAATTT 8781
| |||||| | ||||| | |||| ||| | || ||||||||||
Sbjct 8242 ATTTACATGTTGATTAAAAGGCCTAGTTGC----GATT-AAAACGGAATGTAAATAATTT 8296
Query 8782 AAAGTAGTGGCAATATGTTCAGCAGTaaaaaaaTAAATGACCCATCTTCGTAGTGTTAAT 8841
|| || || ||||| ||||| || ||||||| ||| ||||||||||| | |
Sbjct 8297 AATGTTGTAGCAATGTGTTCTGCTATAAAAAAGTAAGTGACCCATCTTATCAAAAATGGC 8356
Query 8842 TCAGTAATATTTCCC---ATTGCCTCTATTCTTTGCATTGTTTCATAAAAATAAGGAGCA 8898
|| | || ||||| || | | ||| ||| |||||||||| | | |
Sbjct 8357 TCTGAAA---TTCCCTCTATAATGTGCACTCTAGTCATGATTTCATAAAAGGTAATTGGA 8413
Query 8899 AAATTAAAAAATTGATGTTGTCTTGCTGTTACTGTTAGTTCATCTTCCAATGCTCTTATA 8958
|| ||||||| || | | ||| | | || ||||| || | |||| | |||
Sbjct 8414 AATCTAAAAAACTGTTCCTCCCTTTCGGAAGAGGTAAGTTCCTCCTGCAATAGCCGAATA 8473
Query 8959 ACATCCGCTATAGCATTCCTCACTTCTTCATTAAAAGATGGTAATTCT---TCTTC--CA 9013
|| | || || | | |||||||| ||| ||| |||| | |||| |||| ||
Sbjct 8474 ACCGCGGCAATTGTTTCCCTCACTTGATCACTAA---ATGGGATTTCTGGACCTTCTACA 8530
Query 9014 TTATT---TCCACT-TCAGGTG---AAGGGGGTGGAAGTGG---ACGACGTTTTCTTTTA 9063
| | | | |||| |||| || |||||| | | |||| ||||| ||| |
Sbjct 8531 TCACTGGCTTCACTCTCAGATGTGCTAGGGGGAGAAGGTGGCGCGCGACGCCTTCGTCGC 8590
Query 9064 GGT---AAAGGAAGACTTTCTATAAATCTTTGCACCATTTCTCCTCGTCTTCGGCGCATT 9120
| | || || | ||||||||||||||| || || | |||||||| | || ||||||
Sbjct 8591 GTTCTAAATGGCAAACTTTCTATAAATCTCTGAACTACTTCTCCTCTGCGACGTCGCATT 8650
Query 9121 TCTTCTGTAACAGCTCTACCATTTTCTCTTGGTC 9154
|||||||| || ||||| || |||||||||||
Sbjct 8651 TCTTCTGTCACTGCTCTTCCTCCTTCTCTTGGTC 8684
Score = 111 bits (122), Expect = 3e-20
Identities = 303/470 (64%), Gaps = 0/470 (0%)
Strand=Plus/Plus
Query 5335 ACATTTATCACATACTGTATTTTTTAAAGCATATAATTTTGGTGCTaaaaaaaCTGATTC 5394
||| ||||| || | | | ||||| |||||| | ||||| |||||||| || || |
Sbjct 4880 ACAGTTATCGCACCATATTTCTTTTAGAGCATACATCTTTGGAGCTAAAAACACAGACTT 4939
Query 5395 AGAGCTATAAGCATCATTACCACATTTTTCACATTGAGTTTCACATTCTACTAACCATGT 5454
| | ||| || | | ||| ||| ||| || ||||||||||||||||||||
Sbjct 4940 TGGGGCATATGCGGGCTGATTACAGCGTTCGCATCTTGTCTCACATTCTACTAACCATGT 4999
Query 5455 TAAACTTGGATTATCTGGATCAAAAACAAGNNNNNNNNNNNNNNNNNNGATCCGATTTTT 5514
||| |||| || |||||| | | | | || ||
Sbjct 5000 TAAGGAAGGATCATGCTCATCAAAGATTAAATTATTGCTGTTTTCTTTAAGTCTATGCTT 5059
Query 5515 ACCTTTAGTTTCCATTAGTTTATGTCCAATTTCGGTGACAAATATGCTGTCAGTATCTCC 5574
|||||| || ||||| ||| |||| || |||| || || || | ||||||||||||||
Sbjct 5060 ACCTTTGGTCTCCATCAGTCTATGCCCTGTTTCTGTCACGAACAAACTGTCAGTATCTCC 5119
Query 5575 GTAGACAGATTTGATTGATCTTTCTTCTAGAGGTATTCCTAGATCTTCTTCATAAAGAAA 5634
||| | ||||| | ||| || |||| ||| |||||| ||| | |||
Sbjct 5120 GTAAATCGATTTTAAAATTCTGCGGTCCCAAGGTCGTCCCCAATCTTCAGAATATAAAAA 5179
Query 5635 ACCAGCCCATTCTGATACAAAGGCTCGCGTCCAAGCCAATACAAATGAGGCAATTTGAGA 5694
| |||||||| || || || || ||||| || | |||||||| || ||||| ||
Sbjct 5180 TTCCGCCCATTCGGAAGTGAAAGCGCGGGTCCAGGCGAGAACAAATGACGCGATTTGGGA 5239
Query 5695 TGGGTATTTATTATTAACAATAAGTGGTGAAtttttttCTAAAGTATGTAAACACATGTC 5754
|||||| |||||| | || |||| ||| | ||||||| | || | || | ||
Sbjct 5240 TGGGTAGCGGTTATTATCTATTTGTGGGGAAGTATTTTCTATCATTTGAAGGCATAGGTG 5299
Query 5755 TTGTTCTTCCGAATCTAAAAATGTGATTGGTTTATATTTATAAGTGACGT 5804
|| || || | || || |||||||| ||| | ||||| || ||||
Sbjct 5300 AGAATCGTCAGATTGCAAGAAAGTGATTGGCTTAAACTTATATGTCACGT 5349
Score = 104 bits (114), Expect = 5e-18
Identities = 154/216 (71%), Gaps = 2/216 (1%)
Strand=Plus/Plus
Query 7699 AAAAGGTACTAGTTGTTTTCCAAATTTTCCATGCCAAGTATAGGTTTCTACATCATATGT 7758
||| || | || |||||| ||||| ||||||||| ||||| ||||| | ||||| ||
Sbjct 7250 AAATGGAATTAATTGTTTGCCAAAGGCTCCATGCCAGGTATAAGTTTCAATGTCATAAGT 7309
Query 7759 AATAAAAAGTCTTTCTGTA-GATTTACAAGATCCTATTGGAAAAAATTGAATGTTTTCCC 7817
||| | | | || |||| || |||| || || || |||||||| || |||| ||
Sbjct 7310 GATATAGACACGTTGTGTATGACTTACG-GAGCCAATGGGAAAAAAAGATATTTTTTTCC 7368
Query 7818 ACCACTGAGCCGATTGAGTATTAATTTGATGAAAGTAATAGTCTCTTCTTCTTGCTGAAC 7877
|||| | | | | || ||| | || ||||| ||| | ||||||||||| ||||||
Sbjct 7369 ACCAGTCACATGTTGAAGAATTTACATGGTGAAAATAAAAATCTCTTCTTCTGACTGAAC 7428
Query 7878 AGGTGTGAGAATTCTTAAAACATCTACCACAATATT 7913
| | || | || |||||| | ||||||||| |||
Sbjct 7429 ATGAATGCGTGTTTTTAAAAAAACTACCACAAAATT 7464
Score = 95.1 bits (104), Expect = 2e-15
Identities = 299/461 (65%), Gaps = 2/461 (0%)
Strand=Plus/Plus
Query 13954 TTATAGAAGTTGGTTTTTAGCATATAATTTTGGACCAGAAAGTGGGTTAAAAAGCACTAT 14013
||| |||||||||| |||||||||||||| || || | |||| | ||| | |
Sbjct 12858 TTACAGAAGTTGGTATTTAGCATATAATTACGGTCCTCCAGATGGGGTTAAATCTAAAAC 12917
Query 14014 GCTGTTAACCAATCCAGATGTTACATGTGGAGTTGAACAGGTTTATTGGAGTTTACCAGA 14073
|| ||||| | |||||||| |||||||| ||||| | || ||||| | |||||
Sbjct 12918 ACTTTTAACAACCCCAGATGTCACATGTGGTCCCGAACAAATATACTGGAGCCTTCCAGA 12977
Query 14074 TATGACTGTAAATCCTGTAACTTTTAAGTC-AAGTCAAAATTCTAACAATTTTCCAGTTG 14132
||| | | | |||||| | ||||| | | | || || ||||| | || ||||
Sbjct 12978 TATAGTTCAAGAACCTGTATCCTTTAAACCTACCTTTAAGTTGGAACAA-ATGCCTGTTG 13036
Query 14133 TTGGAACAGAAATGCTACCATTACATTCTAGAAGTTTTGTAAACCCTCTTGCTGTTTACT 14192
| ||| |||| || | || || | | || || | ||| | | ||||| || |
Sbjct 13037 TGGGAGTAGAATTGTTGCCGCTAAAAGCCAGGGCGTTCTTTAACGCCCAGGCTGTGTATT 13096
Query 14193 CTCAAATGGTTGAAGGGACAACTAATCAAACCCACGTTTTTAACCGTTTTCCTGAAAACC 14252
| || ||| | | | ||||| ||||| || || || || | |||||||| || |
Sbjct 13097 CGCAGATGTTAGCGGATTCAACTTCGCAAACACATGTCTTCAATAGATTTCCTGATAATC 13156
Query 14253 AGATTTTGATGCGCGCACCGGCTTCTGGTATAACAAGTATCAGTGAAAACGTTCCGACCC 14312
| || || || || |||| ||| | || ||||| |||||||| || |
Sbjct 13157 AAATCTTAATCCGTCCACCAGCTCCCACAATTTGCTCCATCAGCGAAAACGTGCCATCTT 13216
Query 14313 TTACAAACCACGGAATCTTACCGCTGCAGAACAACATTCCAGGTGTTCAGCGCGTAGTGC 14372
| || | ||||||| | | | |||| | |||| | || | ||||| ||| |
Sbjct 13217 TGACGGATCACGGAACAATTTCTTTAAAGAATAGCATTACTGGGATACAGCGTGTAATTT 13276
Query 14373 TAAACGACGCCAGGCGCAGAACGTGTCCTTACGTATACAAA 14413
||| |||||||| | |||||| ||| |||||||| |||
Sbjct 13277 TAACAGACGCCAGAAGAAGAACGGTTCCATACGTATATAAA 13317
Score = 84.2 bits (92), Expect = 4e-12
Identities = 106/145 (73%), Gaps = 8/145 (6%)
Strand=Plus/Plus
Query 22720 TATGAATCTTTATTGTTTTGTCCTATTACACCCCCCAAGCGTGaaaaaaaTGGCGTGTGT 22779
|||||||||||| |||| || | ||| || |||||| ||| ||||| ||||||
Sbjct 20125 TATGAATCTTTAATGTTCACCCCAGAAAAACCTCCAAAGCGTCAAAGTAATGGAGTGTGT 20184
Query 22780 GAAGCAAAC----CCAAAACTTAATTTTTATCCACCTTTTATGGTGCCAGAACTTTTGGC 22835
||| | || ||| | ||||| |||||||||||||| || || ||| | |||||
Sbjct 20185 GAACCTAATGTGGCCA----TCAATTTCTATCCACCTTTTATTGTTCCCGAATTATTGGC 20240
Query 22836 TACTTATCATATATTTTTTCAAAAT 22860
| || ||||||| || ||| |||||
Sbjct 20241 TTCTCATCATATTTTCTTTGAAAAT 20265
Score = 80.6 bits (88), Expect = 5e-11
Identities = 68/84 (81%), Gaps = 0/84 (0%)
Strand=Plus/Plus
Query 25231 CCCACGCCCTATGTTTGGTCTTATCAACCACAAATGGGAGTGGCGGCGGGTGCTTCCCAA 25290
|| ||||||||||| ||||| |||||||||||| | || ||||| | || || | |||
Sbjct 22388 CCTACGCCCTATGTGTGGTCCTATCAACCACAATTAGGTGTGGCTTCCGGCGCCGCTCAA 22447
Query 25291 GATTACTCAACAAGAATAAATTGG 25314
|||||||||||| | || ||||||
Sbjct 22448 GATTACTCAACATGTATTAATTGG 22471
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 101268740354886
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |