Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dipodomys_20ordii_20[refseq_20GCF_5F000151885.1_202014-12-12] 65,193 sequences; 2,236,368,823 total letters Query= NC_024150.1 Length=31709 Score E Sequences producing significant alignments: (Bits) Value seq4931 594 1e-165 >seq4931 Length=27746 Score = 594 bits (658), Expect = 1e-165 Identities = 1333/1988 (67%), Gaps = 47/1988 (2%) Strand=Plus/Plus Query 18890 GGAAATGTTAGCGCCATGGAAATTAACTTAAGGGCTAATTTGTGGAAAAGTTTTCTTTAT 18949 ||||||||| ||||||||| ||| || ||| || ||||||| | |||||| ||| Sbjct 16526 GGAAATGTTGAATGCATGGAAATCAACATAGCGGCCAACCTGTGGAAGAATTTTCTGTAT 16585 Query 18950 TCAAATGTGGCTCTTTATTTGCCAGATTCTTATAAATTTACACCAGATAATATCGAAGTC 19009 || ||| | || || ||| |||| ||| | |||| || || | ||| | | | | Sbjct 16586 TCTAATATCGCGCTGTATCTGCCCGATAACTTTAAAACCACTCCCGCAAATGTGGTATTG 16645 Query 19010 CCAGACAACCCAAATACT-TATCAGTATATGAACAACCGCATCCCTTTTGGAAATCTAGT 19068 || | | | | || ||| || ||||| ||||| || || ||| || Sbjct 16646 CCGCAGGATC-AGCGGCTATATGCTTACATGAATTCTCGCATTCCAGCCGGGGGTCTGGT 16704 Query 19069 TGATACTTATGTAAATATTGGTGCTAGATGGTCTTTGGATGCAATGGACACCGTAAACCC 19128 || |||| | || || || | || ||||| | |||| |||||||| || || || Sbjct 16705 AGAGGATTATATCAACATAGGAACCAGGTGGTCAATAGATGTGATGGACACGGTTAATCC 16764 Query 19129 ATTTAACCATCATAGAAATGATGGACTATGTTATAGATCTCAACTGTTGGGAAATGGGCG 19188 |||||| ||||| |||||| ||| | | || || ||||| || || |||||||| || Sbjct 16765 ATTTAATCATCACAGAAATACTGGTTTGAGGTACAGGTCTCAGCTATTAGGAAATGGTCG 16824 Query 19189 GTACTGTAGTTTTCATATTCAAGTGCCGCAAAAATTTTTCGCGCTCAAAAACCTTCTTCT 19248 || | ||||||||||| || |||||||| ||||| || || |||| | ||||| Sbjct 16825 CTATGCTTCCTTTCATATTCAGGTTCCGCAAAAGTTTTTTGCACTTAAAAGTTTGCTTCT 16884 Query 19249 TTTGCCCGGTTCTTATACTTATGAGTGGTCAATTAGAAAAGATGTAAATATGATACTACA 19308 | || || || || | ||| || ||||| |||||||||||||||| ||||| | || Sbjct 16885 GCTACCGGGATCGTACAGTTACGAATGGTCTTTTAGAAAAGATGTAAACATGATTTTGCA 16944 Query 19309 ATCAACATTGGGCAATGATTTAAGGGTGGATGGTGCTTCCATAACTTTTACAAGTGTTAA 19368 || | ||||||||| | |||| ||| || || || |||| ||| || ||| Sbjct 16945 GAGTACTCTTGGCAATGATCTGAGGGAGGACGGAGCGTCAGTAACATTTGACAGCATTAG 17004 Query 19369 CCTCTTTGCTAGCTTTTTTCCAATGGCCCATAATACATGTTCAACACTAGAAGCAATGCT 19428 ||| ||||||| || ||||| ||| | ||||| || ||| || || ||| | ||||| Sbjct 17005 CCTATTTGCTACTTTCTTTCCGATGTCTCATAACACTGCTTCTACTCTGGAAACTATGCT 17064 Query 19429 GAGAAATGATGTCAATGACCAATCTTTTAATGATTATCTATCCTCAGCG--AATATGCTT 19486 | ||||| || || || || || || || ||||| || ||||| || |||||| Sbjct 17065 TCGCAATGAGGTTAACGATCAGTCCTTCGGCGACTATCTTTC--CAGCGTTAACATGCTT 17122 Query 19487 TTTCCAATTCCAGCAAACGCAACACAACTTCCTATTTCCATTCCTTCTAGAAACTGGGCT 19546 | | | ||||| | | |||| | | ||||| || ||||| | || || ||||| Sbjct 17123 TATGCTATTCCTCCGCATCAAACAACAGTGCCTATCTCTATTCCAGCAAGGAATTGGGCG 17182 Query 19547 GGATTTAGGGGGTGGAGTTTTACACGCCTTAAACAAAAAGAAACACCAGCTTTGGGGTCT 19606 | ||||| || ||| ||||| | || |||||| | ||||||||| | | || ||| Sbjct 17183 GCCTTTAGAGGTTGGGCATTTACTAGACTAAAACAACAGGAAACACCAACCATTGGCTCT 17242 Query 19607 CCTTTTGATCCTTATTTTACTTATTCAGGCAGTATCCCTTATTTGGATGGAACTTTTTAT 19666 | ||||| || || |||| || || ||| ||||| |||| ||||| || |||||| Sbjct 17243 GCATTTGACCCATACTTTAGGTACTCGGGCTCAATCCCGTATTGGGATGCGACCTTTTAT 17302 Query 19667 CTTAGTCACACCTTTAGAAGGCTTTCAATTATGTTTGATTCATCAGTTTCATGGCCAGGA 19726 | |||||| | |||| | | | || ||||||||| ||||| ||||| ||| Sbjct 17303 TTATCTCACACTATCAGAAAGGTGGCCATACAGTTTGATTCTTCAGTAAGTTGGCCTGGA 17362 Query 19727 AATGATAGACTTCTTACACCAAATGAATTCGAAATCAAAAGGTATATTGATGGAGATGGT 19786 ||||| |||||| | | ||| |||||||| | || ||||| | | || | || || Sbjct 17363 AATGACAGACTTTTAATACCTAATGAATTTCACATAAAAAGAGAGGTGGACGCGGAAGGC 17422 Query 19787 TACAATGTTGCTCAATGCAATATGACTAAAGATTGGTTTTTAGTGCAAATGTTGGCAAAT 19846 || || |||| ||| || ||||| ||||||| | | | |||||| | || | Sbjct 17423 TATAACACCTCTCAGAGCATAATTACTAAGGATTGGTATATGATTCAAATGCTCGCTCAC 17482 Query 19847 TACAACATTGGTTTTCAAGGCTATCATTTGCCCCCCGATCATAAAAACAGACTTTACTCT 19906 ||||| || || | ||||| | ||| | ||| | ||| ||||| | ||| | || || Sbjct 17483 TACAATATCGGATACCAAGGTTTTCACCTACCCACAGATTATAAAGATAGATTGTATTCC 17542 Query 19907 TTTATGAGAAATTTTGAACCAATGACAAGACAAATTATTAATGAACTTGATGAAACAAAC 19966 ||| | |||||||||||||| ||| |||||| || | || | || | | || | Sbjct 17543 TTTTTAAGAAATTTTGAACCCATGTGTAGACAAGTTGT---GGATCCTGGTAAGACGGAA 17599 Query 19967 AAATATTTTGGTGTTAATGTTTTAAATCAACACAATTCTTCTGGATATACTGGTTTTAAA 20026 |||||| ||| | || | |||| || ||| || | ||||||||| Sbjct 17600 AAATATCAACCCGTTGCTCTTAAATATCAGCATAAT---------AATTCAGGTTTTAAA 17650 Query 20027 AGC------GCTGCCTTGGCAAGAGAGGGGCACCCATATCCAGCTAATTGGCCTTATCCC 20080 | | | |||| | || | || || || ||||| ||| ||||||| || Sbjct 17651 AACCATTATGGACCCTTTGGGCGACAAGGCCATCCTTATCCCTGTAACTGGCCTTTCCCG 17710 Query 20081 CTTATTGGAAATGAAGCAGTAAGCACTATTACTCAAAAGAAATTCTTGTGTGATAGAACT 20140 || || ||| | | |||| | || |||||||| | ||||| || ||||| ||||| Sbjct 17711 CTCATCGGAGAACAGGCAGGTAAAACCATTACTCAGAGAAAATTTTTATGTGACAGAACA 17770 Query 20141 ATGTGGAGAATACCATTTTCTTCCAACTTTATGTCTATGGGTGCATTAACAGACTTAGGT 20200 ||||||| || || || || |||||||||||||| ||||| || ||||||| | || Sbjct 17771 CTGTGGAGGATTCCGTTCTCCTCCAACTTTATGTCCATGGGAACACTAACAGATCTGGGA 17830 Query 20201 CAGAATTTGCTTTATGCTAATGCGGCACATGCTTTGGACATGGTTTTTGAAGTTGACCCA 20260 || |||||||| ||||| ||| | || |||||||| |||||| | ||||| || || Sbjct 17831 CAAAATTTGCTATATGCAAATTCAGCTCATGCTTTAGACATGACAGTCGAAGTAGATTCA 17890 Query 20261 ATAGATGAACCCACCCTTCTCTACATTCTTTTTGAAGTGTTTGACGTCTGTCGCATCCAT 20320 || || ||||| || |||| || || |||||||| |||||| | || | | ||| Sbjct 17891 ATGGAGGAACCAACTTATCTCATGATGCTATTTGAAGTATTTGACATGTGCAGAGTGCAT 17950 Query 20321 CAACCACACAGGGGCGTAATTGAAGCAGTCTACCTAAGAACCCCATTTTCAGCTGGAAAC 20380 || || || | || || || |||| | || ||||||||||| ||||| || || ||| Sbjct 17951 CAGCCTCAACGAGGTGTCATAGAAGTTATTTATCTAAGAACCCCCTTTTCGGCAGGTAAC 18010 Query 20381 GCCACCACATAA--ATGGGTTCCACTGAAGATGAGCTGCATTGCATTATTAAAGATTTAA 20438 ||| | |||||| ||||| || | || || || | | | ||||| ||||| | Sbjct 18011 GCCGCAACATAAATATGGGGACCTCAGAGGACGAAATAAAACGAATTATCTCCGATTTGA 18070 Query 20439 AAATACAACCATATTTTTTAGGTGTTTATGATAAAAGATTTCCTGGGTTTATTAATAAAC 20498 | | ||| | |||||| ||| ||||||||| | ||||| |||||||| || Sbjct 18071 ATGT---ACCTTGTTTTTTGGGTACCTATGATAAACGCTTTCCGGGGTTTATCCGAAAGG 18127 Query 20499 ATAAAATTTGTTGTGCAATTATAAACACCGCTGGC--AGAGAAACTGGGGGAATGCATTG 20556 | | | || ||||| ||| ||||||||| ||| | ||| || || | ||||| Sbjct 18128 ACAGGTTATGCTGTGCCATTGTAAACACCG--GGCTTCGCGAAGAGGGCGGTGTCCATTG 18185 Query 20557 GCTTGCTTTAGGTTGG-TTCCC---ACCAAAACAACTTTTTTACTTGTTTGATCCTTTTG 20612 | |||| || | |||| |||| | |||||| |||||| |||||||||| || | Sbjct 18186 GATTGCGTTTGCTTGGAATCCCTATATTAAAACA----TTTTACATGTTTGATCCATTCG 18241 Query 20613 GCTTTTCTGATGCAAAATTAAAGCAAGTATACAATTTTGAATATCAGGGGCTTTTAAAAA 20672 | || || ||| | | || || |||| ||||| || |||||| || | | ||| ||| Sbjct 18242 GATTCTCGGATCAAGATTTGAAAAAAGTTTACAACTTCGAATATGAGCGAATGTTAGAAA 18301 Query 20673 GAAGCGCGCTTTCATCTTCTCCAGA--TAAATGTGTTACCTTAATTCAAAGTAAAGAAAC 20730 ||||| | | ||| | | | | ||||||||||| | || || || | Sbjct 18302 ACAGCGCAGTAT--TCTCCACAAAAACCAAATGTGTTACTGTCATAAGCAGCTGTCAATC 18359 Query 20731 TATACA-AGGGCCAAATAGCGCCGCTTGTGGTTTATTTTGCTGTATGTTTTTACATGCTT 20789 | || || || | | || || || ||| | ||||| ||| | ||||| | || | Sbjct 18360 GGTGCAGAGTCCCTACAATGGCTGC-TGCGGTCTGTTTTGTTGTGTCTTTTTGAAAGCCT 18418 Query 20790 TTATAAACTGGCCTTTAAATGCCATGAATAATAACCCAACTATGGATTTATTGACAGGAG 20849 ||| | | ||| || | ||| |||| ||||||| ||||||||||| ||||| | Sbjct 18419 TTACTATGTATCCTCATTATCCTATGGATAAGAACCCAATAATGGATTTATTTACAGGTG 18478 Query 20850 TTTCAAAT 20857 | ||||| Sbjct 18479 TGGCAAAT 18486 Score = 297 bits (328), Expect = 4e-76 Identities = 900/1379 (65%), Gaps = 40/1379 (3%) Strand=Plus/Plus Query 6026 ATTTGATCAGCAAATACAATTGTTTTATTATCTAATTTAGTTGCAAATGATCCATATAAA 6085 |||||||| | ||| | ||| ||||||||||||| | || ||||| || || || | Sbjct 5574 ATTTGATCCGGAAACAGTATTTTTTTATTATCTAACCTGGTGGCAAAGGAACCGTACAGT 5633 Query 6086 GCATTTGACAAAAGTTTGGCAATACTGCGTATTGTTTGAtttttt--tCTTTATCTGCTT 6143 || |||||||| ||||| || || || || ||| || | || | | ||| || || Sbjct 5634 GCGTTTGACAACAGTTTAGCGATGCTTCG--CTGTGTGCTGTTGTGGTTTTTTTCCGCGG 5691 Query 6144 TTTCTTTGGCCGCTATATTTAATTG-TACATATTCTTTAGCAATACATTTCCATTTTGGC 6202 ||||| ||||||||| ||| | | ||| |||||| | || | || ||||| || Sbjct 5692 CCTCTTTTGCCGCTATA-TTAGTGGCTACGTATTCTCTTGCCACGCAATTCCA--CTGCT 5748 Query 6203 CATATA--ATAGTTCTTTCATCTGGAATAATGTTAACTTCCCACCCTCTATTATGAAGAG 6260 || ||| || || |||||||| | | ||| | ||| |||| |||||| | || Sbjct 5749 CAAATACTGTAACTCGCTCATCTGGGACCAACCTAATCTTCCATCCTCGATTATGCAAAG 5808 Query 6261 TTATTACATCAATTGATGTTGCTATTTCTCCACGCAGCGGTTCATTGGTCCAGCATAATC 6320 | || |||| || || || || ||| || | | |||||| |||||||| | | Sbjct 5809 TAATGGCATCGATGGACGTGCATACTTCGCCTCTTAAATTTTCATTTGTCCAGCAAAGAC 5868 Query 6321 TTCCGCTTTTGCGTGAACAAAAAGGTGGTAAAATATCTAACATTGTTTCATCAGGTGGGG 6380 |||| ||| | |||||||| || ||||||| |||||| | ||| |||| | | Sbjct 5869 GCCCGCCTTTTCTCGAACAAAATGGCGGTAAAACATCTAAGTATTCTTCGGCAGGGGCGT 5928 Query 6381 TGGCATCAATTGTAAAAATTCCTGGTAATAAATGTTTGTCAAAATAATCGATTTGATTTT 6440 ||||||||| || ||| | ||||| | ||||||||| || ||| Sbjct 5929 CAGCATCAATTACAACAATGGCCGGTAACAGGGCAGGGTCAAAATAGGAAAT----TTTG 5984 Query 6441 TTA---GTTTTAACATGTTTT-CCCAGTCTTTAATTGCTAAGGTTCTATCAAAAGGGTTA 6496 | | ||| || ||||| | | | | || ||| |||| ||||| || ||| Sbjct 5985 TCACCGGTTGCAAAGCGTTTTGAATACTGATAGAGAGCCAAGTTTCTGTCAAAGGGATTA 6044 Query 6497 AGGGGCCTGCCTGAAGGAAATGGATGAGTAAGTGCGCTTGCATACATGCCACAAATGTCA 6556 || || ||| | || | ||||| || | |||||| |||||||| || |||| ||| Sbjct 6045 AGTGGTGGGCCAAAGGGCATGGGATGCGTTAATGCGCTGGCATACATTCCGGAAATATCA 6104 Query 6557 TAAACATATAGTTTTTGCTCTAATACACCAAGGTAAGTTGGGTAACACCTTCCACCTCTA 6616 |||||||| | || ||| || ||||| | |||||| ||||| |||| ||| ||||| Sbjct 6105 TAAACATAAATAGGTTCCTCAAAAACACCTATGTAAGTGGGGTAGCACCGTCCCCCTCTG 6164 Query 6617 ATGCTTTCTCTAATATAGTCATATAATTCACATGAAGGAGCTTGAATAACATCTCCTAAA 6676 ||||||||||| | | | ||||| | || ||| || || ||| | || ||| Sbjct 6165 ATGCTTTCTCTTACAAAATCATAAATGTCGTGTGACGGGGCCAGAAGAGTATTCGACAAA 6224 Query 6677 TTGGGTTTATTTGGTTTTTCCGCTCTATATAAAATTTGTCTAAAAATAGCATGAGAATTT 6736 | |||| | | |||| | || | | | ||| ||||||| ||| ||||||| Sbjct 6225 TGATGTTTTTCTAACTTTTGAGTCTTAAACACCAGTTGCTTAAAAATTGCAAAAGAATTT 6284 Query 6737 GAACTAATAGTTGGTCGCTGTAAAATATTAAAATTTGCATTTGGTAAATTTACGGCCTCT 6796 || ||||| ||||| ||||| |||| ||||||||| | | | || | | | | Sbjct 6285 GAGCTAATTGTTGGACGCTGAAAAACATTAAAATTACAAGCTATCATATGCAAGCTTTTT 6344 Query 6797 GTTATAAATTTTNNNNNNNNNNNNNNNNNNNNNAATACCAATTCTGCAGTTACTTTAACA 6856 |||||| ||| ||| |||| || ||| || ||||| Sbjct 6345 TGTATAAAGTTTAAATATGAATCATACAGACAATGTACTAATTGTGAAGTAACAATAACA 6404 Query 6857 TCTAAGGCGCAATAATTTAGGGTTTGTTCAATAATATCATATTCTGTGTTTTGT---TTT 6913 ||| | ||||| | | || ||||| ||||| | | || ||||| || Sbjct 6405 TCTTGAACACAATATGCCAAAACATTTTTTATAATGTCATAATTTTTGATTTGTGAACTT 6464 Query 6914 TTCCATATAGTTTTATTTTCTTCATATTCTTGTTGACTTTCCCAATACTTGGCTTGAGGA 6973 ||||| | | |||||| || |||| || |||||||| | | | ||| Sbjct 6465 TTCCACAGATCTTTATTAAAAGTGTACTCTTCTTCGGAATCCCAATAAGCGACGTCTGGA 6524 Query 6974 AAACCATCATCATCTTGTTGGTAAGAACCTAGCATATAAAATTCATTAACTGCCTTATAG 7033 || || || | |||| |||| || ||| |||| |||||||||| | || || || Sbjct 6525 AATCCGTCTTGATCTACCAGGTAGGATCCTTTCATAAAAAATTCATTTATGGCTTTGTAA 6584 Query 7034 GGACAATTTCCTTTTTCAACACTTAAATCATAAGCATTGGCTGCTTTTCTTAAACTAGTG 7093 || |||| || ||| | | |||||| ||| || | ||| || ||||||||||| ||| Sbjct 6585 GGGCAATAACCCTTTGTAGCTTTTAAATTATAGGCTTCGGCCGCCTTTCTTAAACTGGTG 6644 Query 7094 TGGGTTAAAGCAAAAGTATCTCTTACCATAAATTTTACAAACTGATATTTAAAATCACTT 7153 |||||||| || ||||| | ||||||||||||||||| |||| || | || | Sbjct 6645 TGGGTTAATTGGAATGTATCACGGACCATAAATTTTACAAATTGATGTTGCATGTCGGAT 6704 Query 7154 TC-TTCACATATTCCTTCTTCCCATACTTTATAATCTTTTCTTTTTTGATAAAA---AGG 7209 | | || ||| || |||| ||| | | ||| || ||||||| | ||| || Sbjct 6705 GCGGTTAC-TATGCCCTCTTGCCAAGCAGCAAAAT-TTGGCTTTTTT--TCAAACTTTGG 6760 Query 7210 GTTTGGCAAAGAAAAAGTAATATCATTAAATAATATTTTACCACATCTGGGCATAAAATT 7269 || || |||| | || |||||||||||||| |||||||| |||||| | |||| | Sbjct 6761 ATTAGGTAAAGCTATGGTTATATCATTAAATAAAATTTTACCGTTTCTGGGTA-AAAAAT 6819 Query 7270 TCTATTTATCTTAAAAGGAGATGGAATTTCTGAT-----TTATTATTAATTACTTGAGCA 7324 || | | || |||| || | | | ||| ||| | || | ||| ||||| Sbjct 6820 TCCGTCTCACTAAAAAACAGTCG----TCCAGATCATTGTTAGTGTTTAATACCTGAGCG 6875 Query 7325 GCGAGAACTATTTCATCAAATCCATTAATATTGTGACCAATTATATAAACTTCAATAAA 7383 || || || |||||||||||||| || || ||||| ||||| | ||| | ||| ||||| Sbjct 6876 GCAAGCACGATTTCATCAAATCCGTTTATGTTGTGTCCAATCACATATATTTC-ATAAA 6933 Score = 284 bits (314), Expect = 2e-72 Identities = 623/917 (68%), Gaps = 31/917 (3%) Strand=Plus/Plus Query 3864 ATTAATA---AATAAATACAATAAAATTTGGATTGATTTGAAAATTTTTATTTGTTGCGT 3920 ||||||| || |||| |||||||| || |||||||| ||| || ||| | Sbjct 3419 ATTAATACCAAAAAAATCAAATAAAAT-------GAGTTGAAAATGTTTTTTATTTGTGA 3471 Query 3921 TTTTCTTGATAGTATTTATTCCATCGTTTTCTGTCAGATAATA-CTTTGTGTATTTTTTC 3979 |||| | || ||| | ||||||| | | |||| ||||| | |||||||||| Sbjct 3472 TTTT---GGTAATATCTGATCCATCGCTCACGGTCAC-TAATAACACGGTGTATTTTTAG 3527 Query 3980 CAATACAGAATAAAGCAAACTTTGTACATTTAAATACATAGGCATAAGACCTTCAGAGGG 4039 || | ||| || | | || ||||||||||||||||| | | |||| | | Sbjct 3528 TAAAATTTCATATAGTTTAGTCTGAACATTTAAATACATAGGGGTCAA---TTCACATTG 3584 Query 4040 ---GTGCATATACATCCATTGCAGGGAATCATGAGGAGGAGTTGTTTGATAAATAATCCA 4096 | ||||||||||||||| | | | | ||| || || || | ||||| Sbjct 3585 CGCGCTCATATACATCCATTGTTGACTTTGACACGTAGGGGTGGTGGTGTACACGATCCA 3644 Query 4097 ATCATATTTAGAATGAAGGTTATTAAAATTAAAAATATCTTTAAGTAGCAGAGATATAGC 4156 |||||| || || | | || | ||| |||||||| | || || | || || Sbjct 3645 ATCATAAGATGAGTGTAAGGAATGGTAGGCAAAGATATCTTTTAATAATAGGGTGATTGC 3704 Query 4157 AGTTGGTAAACCTTTAGTGTAAGAATTAATGAATCTATTTATTTGCCCCGGCTGCATTTT 4216 |||| |||||||| |||| |||||| ||||| |||| || | || |||||||| Sbjct 3705 TAAGGGTAGGCCTTTAGTATAAGTATTAATAAATCTGTTTAGCTGAGCGGGTTGCATTTT 3764 Query 4217 TGGGCTCATTATGTGCATTTTAGCTTGTATTTTTAAGTTTGATATATTTCCACCTAAATC 4276 ||||||| ||| || ||||||||| ||||||| | ||||||||||||| |||||| Sbjct 3765 GGGGCTCAGTATATGATATTTAGCTTGAATTTTTAGTGTGGATATATTTCCACTTAAATC 3824 Query 4277 TCTTCTGGGATTCATATTATGTAACACTACTAAAAGAGTGTAACCAGTACATTTAGGATA 4336 | ||| || |||||||||||||| || || || ||| ||| || | || ||||| Sbjct 3825 TTTTCGCGGGTTCATATTATGTAATACCACAAACAGATAGTACCCGCTGCACGAGGGATA 3884 Query 4337 TTTATCATGTAATTTTGATGGAAAGGCGTGAAAAAATTTTG--ATACTGGATGACCATCA 4394 ||| ||| || |||||| ||||| |||||||||||||||| ||| || || | | Sbjct 3885 TTTTTCAAATAGTTTTGAAGGAAACGCGTGAAAAAATTTTGCAATA-GGGCTGTTC-CCT 3942 Query 4395 CCAATATCTTCCATGCATTCATCTAAAATAATAGCAATTGGCCCATTTTTTGCAGCTGAG 4454 || | || |||||| || ||||| | ||||| || || || || |||| || || Sbjct 3943 CCTAAATTTTCCATACACTCATCAATGATAATGGCTATGGGTCCGGTTTTGGCCGCCTGT 4002 Query 4455 GCAAAAATGTTATTTGGGTGGGAAACATCATAATTATATTC-TTGAAGCAATTCGGTATA 4513 |||| | |||||||| || | ||||||||| | ||| || ||| | || | || Sbjct 4003 ACAAATTTATTATTTGGATGCCCTAAATCATAATTTTCTTCGTTTAAG-AGATCCTTGTA 4061 Query 4514 AGGTAGTTTTATAAATTTTGGTGTTAATGTACCACTTCTAGGTA-TATAGGTGCCTTCTG 4572 | ||||| ||| || |||||||||||| | ||| | || | |||| Sbjct 4062 CGATAGTTGCGCGAATCGAGGAGTTAATGTACCAGTCTGAGGCACAATTTCACCATTCTT 4121 Query 4573 GCCCTTGGTTATAATTTCCTTCATAAATTTGTGTTTCCCACGCAAGCATTTCTTGTGGAG 4632 ||| | |||||| ||||| || |||||||| || ||| | | ||||| ||||| | Sbjct 4122 TCCCAT-GTTATAGTTTCCCTCTATAATTTGTGCTTTCCATGACATAATTTCCTGTGGGG 4180 Query 4633 GTATCATGTCAATATTTGGAGCAACaaaaaaaaTAGT-TTCTGGTTGGGGGTTAATAAGA 4691 | |||||||| || || | ||||| || ||||| | | || ||| ||||||| Sbjct 4181 GGATCATGTCTGCATAAGGGGTTACAAAGAATATAGTCTCCGGGGCGGGATTTAATAATT 4240 Query 4692 TGTGATGAAAGTAAATTACGTAATAATTGAGATTTTCCACAACCAGTGGGACCATAAATA 4751 || || || | | ||| | |||||||| |||||||||| |||||| |||||||| || Sbjct 4241 TG-GACGACATAAGATTTCTCAATAATTGGGATTTTCCACTACCAGTTGGACCATATATG 4299 Query 4752 ACTCCAATAACTGGCTG 4768 || ||||| || || || Sbjct 4300 ACCCCAATCACCGGTTG 4316 Score = 246 bits (272), Expect = 6e-61 Identities = 496/722 (69%), Gaps = 18/722 (2%) Strand=Plus/Plus Query 12998 GCTCCTACCGAGGGAAGAAATAGCATACGTTATACTCAATTTGCGCCTTTGTATGATACA 13057 || || || |||||||||||||||||| |||| | | || | | || | |||||| Sbjct 12037 GCGCCGACTGAGGGAAGAAATAGCATAGTTTATTCACCTTTACCTACGTTACACGATACA 12096 Query 13058 ACAAAAATTTACCTTGTGGACAACAAATCTGCGGACATACCATCTCTCAATTATCAAAAT 13117 || ||||||||| || | || |||||| | | ||||| | || || |||||||| || Sbjct 12097 ACGAAAATTTACTTTATCGATAACAAAGCATCCGACATCTCTTCCCTAAATTATCAGAAC 12156 Query 13118 GACCATAGCAGTTTTTTAACCACAGTAATACAAAACAGTGATTTTACTCCTTTGG-AGGC 13176 || ||||| | |||||| | || || ||||| ||||||| ||| ||| |||| Sbjct 12157 GATCATAGTTTATATTTAACATCCGTCATTCAAAATCCGGATTTTAATCCCCTGGAAGGC 12216 Query 13177 -TGGCACACAATCA-ATTAATTTAGATGAAAGATCTAACTGGGGAGGGGAGTTTAAAACA 13234 || || |||| || || |||||||||||||||| ||||| || | || ||||| Sbjct 12217 ACGGGAC---ATCAGATAAAATTAGATGAAAGATCTAGATGGGGTGGTAATTTAAAAACC 12273 Query 13235 TTGTTGCATATGAATATGCCAAATATTACACAATATATGTATAGTAATTCTTTTAAGGTT 13294 | ||||| || || |||||||| || | || |||| |||||||||||||| ||| Sbjct 12274 ATTCTGCATTCAAACATACCAAATATAACCGAGTACATGTTTAGTAATTCTTTTAGAGTT 12333 Query 13295 AAACTAATGTCATCAAATA-TTAATGGTGTAAAAAAG-TATGAATGGTTTGAACTATCAA 13352 || || | ||||| | || | || | | ||| ||||||||| | ||| | | Sbjct 12334 AAGATACCCAC-TCAAAAAGTTGACGG-GCATTTAAGATATGAATGGGTGACTCTAACCA 12391 Query 13353 TTCCAGAGGGGAATTATAC---TATTGCAAAAGTTATTGATTTAATGAATAATGCAATAG 13409 | || || || |||| | | ||| | ||||| ||||| ||||| |||| || Sbjct 12392 TACCCGAAGGAAATTTTTCGGAGATT---ATGGTTATAGATTTGATGAACGATGCCATTA 12448 Query 13410 TAGATAATTATTTAAAAGTTGGTAGACAAAATGGTGTAAAAGAAGAAGATATTGGAGTGA 13469 | | ||||||| ||| || | ||||| || ||||| || || || || | Sbjct 12449 TCTCTCATTATTTGTCTAATGGCAGGTTACGCGGTGTTAATGAAGATGAAATAGGTGTTA 12508 Query 13470 AAATTGACACAAGGAATTTTATGCTTGGTTTTGATCCCATTTCTAAATTAATTATGCCTG 13529 | | ||||| || ||||||| | |||| ||||||| || ||| ||||| ||||| | Sbjct 12509 AGCTGGACACTAGAAATTTTAAAATGGGTTATGATCCCTATTATAAGTTAATCATGCCCG 12568 Query 13530 GTGTTTATACATATGAAGCTTATCATCCAGATATTATTCTTTTG-CCGGAATGTGCAATT 13588 | | ||| ||||||||| | |||||| || | | |||| | || | ||||| ||| Sbjct 12569 GCATGTATCTATATGAAGCATTTCATCCCGACGTGA-TCTTAAGTCCACACTGTGCTATT 12627 Query 13589 GATTTTACCAATTCAAGACTAAATAATTTGCTTGGTATACGaaaaaaaTACCCATTTCAA 13648 ||||||| ||| ||| |||||||| | | |||||| |||||| || |||| ||| Sbjct 12628 GATTTTAGCAAAAGTAGATTAAATAATCTATTGGGTATAAGAAAAAGATTACCATATCAG 12687 Query 13649 CAAGGGTTTATAATAGATTATGACATGTTAAAAGGTGGCAACATTCCAGCTCTTTTAGAT 13708 | | ||||| || |||||| ||| ||| || || ||||| ||||| ||||| Sbjct 12688 AAGGATTTTATTATCACTTATGATGATTTAGTAGGGGGAAATATTCCCGCTCTATTAGAC 12747 Query 13709 TT 13710 || Sbjct 12748 TT 12749 Score = 206 bits (228), Expect = 5e-49 Identities = 285/396 (72%), Gaps = 2/396 (1%) Strand=Plus/Plus Query 18195 TTTATATGGAAGATGTTGATTTAAAAACACCAGATACTCATTTGGTTTATAAAGCCTCTC 18254 ||||| |||||| | ||| || || | ||||||||||| || || || ||||| |||| Sbjct 16041 TTTATGCAGAAGATTTGGATATACAAGCTCCAGATACTCACTTAGTGTACAAAGCATCTC 16100 Query 18255 CTCAAGATGCTCAA-ACTCAAAATGGAATGGGCCAACAAGCAGCACCTAATAGGCCAAAC 18313 | ||| || |||| || | | || ||| || || || |||||||| Sbjct 16101 CCGGGCATGAAAAAGACTCTCT-TGCCCTCGCTCAGCAAAGCGCGCCAAACAGGCCAAAT 16159 Query 18314 TATATTGGTTTTAGGGATAATTTTATTGGTTTGCTTTACTATAACAGTAATGGAAATTTG 18373 ||||| |||||||||||||| ||||| || || | | |||||||||||| | |||||| Sbjct 16160 TATATAGGTTTTAGGGATAACTTTATCGGGTTAATGTTTTATAACAGTAATAGCAATTTG 16219 Query 18374 GGTGTTTTGGCTGGTCAGGCATCACAACTAAATGCTGTAGTTGAATTGCAAGACAGAAAC 18433 ||||| || || ||||| | ||||| || |||||||| | || | ||||||||||| Sbjct 16220 GGTGTATTAGCCGGTCAATCGTCACAGCTTAATGCTGTCATCGACCTTCAAGACAGAAAT 16279 Query 18434 ACTGAACTTTCTTATCAACTTTTGCTAGATACTATCAGTGATCGACATCAGTATTTTTCA 18493 || ||| | || ||||| ||| || |||||| | | ||| || || |||| Sbjct 16280 ACAGAATTGTCATATCAGCTTATGTTAGATAATTTACACGATAGAACTCGATATTACAGC 16339 Query 18494 ATGTGGAATCAGGCTGTAGACAGTTATGACCCTGATGTGCGAATCATTGATAACAGGGGT 18553 |||||||||| || || || ||||| || || || |||||||| || || | || Sbjct 16340 TTGTGGAATCAAGCCGTGGATTCATATGATCCAGAGGTCCGAATCATAGACAATATTGGA 16399 Query 18554 GTAGAAGATGAACTTCCAAATTATTGTTTTCCTTTA 18589 |||||||| ||||||||||||||||| ||||| ||| Sbjct 16400 GTAGAAGACGAACTTCCAAATTATTGCTTTCCGTTA 16435 Score = 192 bits (212), Expect = 1e-44 Identities = 274/386 (71%), Gaps = 0/386 (0%) Strand=Plus/Plus Query 17414 AAGATGGCGGCTCCTTCGATGATGCCTCAATGGTCTTACATGCACATCGCCGGGCAGGAT 17473 |||||||| |||| |||||| | || |||||||||||| | || ||||| || || ||| Sbjct 15311 AAGATGGCCACTCCCTCGATGCTCCCGCAATGGTCTTACTTACATATCGCAGGACAAGAT 15370 Query 17474 GCATCGGAATACCTGTCCCCCGCTTTGGTGCAGTTTTCTCAAGCTACAGAAACATACTTT 17533 || || ||||| | || || || ||| || ||| | || || ||||| |||||| Sbjct 15371 GCTTCAGAATATTTATCTCCTGCGTTGTGTCAATTTGCAAGCGCAACCGAAACGTACTTT 15430 Query 17534 CAAATTGGGAATAAGTTTAGAAACCCAACGGTGGCCCCCACTCATGATGTGACCACTGAG 17593 | | |||| |||||||| || ||||| || || || || ||||| || || || Sbjct 15431 TCCCTAAGCGATAAATTTAGAAATCCGACGGTTGCGCCGACACACGATGTAACTACGGAA 15490 Query 17594 AGGTCACAACGTCTTCAACTACGCTTTACCCCAGTGACACAAGAAGATACTCAATATGCT 17653 || || || | || ||| || | ||| |||| | | |||||||||| || ||| || Sbjct 15491 AGATCGCAGAGACTACAATTAAGATTTGTTCCAGCGGAAAAAGAAGATACACAGTATACT 15550 Query 17654 TACAAAGTGCGGTTTCAACTTACTGTGGGAGATAACCGCGTCTTGGATATGGGAAGTACC 17713 | |||| || |||||||| || || || |||||| | | || ||| |||| |||| Sbjct 15551 TTTAAAGCCCGATTTCAACTCACCGTCGGTGATAACAGAATATTAGATTTGGGTAGTAGT 15610 Query 17714 TATTTTGACATCCGCGGACGTTTGGACAGGGGCCCCTCTTTTAAGCCCTATAGTGGAACA 17773 |||||||| || ||| | ||||| || ||||||||||| || || ||||| ||| Sbjct 15611 TATTTTGATATAAAGGGAAAGATAGACAGAGGTCCCTCTTTTAAACCTTACAGTGGCACA 15670 Query 17774 GCATATAATGCAATGGCCCCCAAATC 17799 ||||| ||| | ||||| ||||| Sbjct 15671 GCATACAATAACCTTGCCCCGAAATC 15696 Score = 143 bits (158), Expect = 5e-30 Identities = 210/297 (71%), Gaps = 0/297 (0%) Strand=Plus/Plus Query 10699 TTAAAAGAAAGTCTTTTAAATATTACTGAGCCGGAAAGTAAATGGTTGGTTGATTTAATT 10758 |||| ||||||||||||||| || | |||| | |||| || ||||| || ||| | || Sbjct 10150 TTAAGAGAAAGTCTTTTAAACATCAATGAGGCCGAAAATAGGTGGTTAGTGGATATGATA 10209 Query 10759 GATGTATTACAAAGCATAATAGTGCAAGAAAGGCATTTAAAAATTGCTGAAAAGGTTGCC 10818 |||| | || | ||||| || |||||||| || | || | ||| ||||| | Sbjct 10210 AATGTTCTTCAGACAATAATTGTTCAAGAAAGACAAATGGGTATCGGTGAGAAGGTATCG 10269 Query 10819 GCCATTAATTTTTCAGTATTTCAATTAAGTAAATTTTATGCACATAAAATTTTTCATACT 10878 || ||||| | |||||| | | ||||||||||||| ||||||| | | || Sbjct 10270 GCTATTAACTATTCAGTGATGACTCTGGGTAAATTTTATGCTAGGAAAATTTATAACGCT 10329 Query 10879 CCTTTTGTTCCTTTAGATAAGGAATTAAAAATATCAACCTTTTATATGAGGGCTGTTATA 10938 | |||||| || |||||||| | ||||||| ||| |||| |||||| ||| || Sbjct 10330 CGTTTTGTACCATTAGATAAAGTGGTAAAAATTGAAACATTTTTTATGAGACTTGTCATG 10389 Query 10939 AAAATATTGATTTTAAGTGAAGATTTGGGAAACTATAGAAATCAAAAAATGCAAAGA 10995 | || || | |||||||| | ||||||||| ||||||||||| | |||| ||| Sbjct 10390 CAGATCTTAACTTTAAGTGTAAATTTGGGAATGTATAGAAATCAGCAGCTGCAGAGA 10446 Score = 118 bits (130), Expect = 2e-22 Identities = 379/571 (66%), Gaps = 24/571 (4%) Strand=Plus/Plus Query 9595 AAAGGCCTTAATAAAGCTAAATCTGCTACAACCCGTTCCGCCAAAATTGATTGTTGCATT 9654 || || | ||||||||| | ||| ||| || | |||||||| || ||| || || Sbjct 9089 AACGGGCGTAATAAAGCAAGATCGGCTGTTACTCTGTCCGCCAAGATACTTTGCTGTATC 9148 Query 9655 TGTTGTAATGTTTCACCCATATTATCAAAATCTAAAAATCTATTGTATGCGCCGGTGTTT 9714 || | ||||||| | | ||| |||| || ||||| || | || || || || || Sbjct 9149 TGCCTCAGTGTTTCATCAAAATTGCCAAAGTCCAAAAACCTGTGATAAGCTCCAGTATTG 9208 Query 9715 ATGGTATAAGAACAATTTGTCATAACAGACCAAT---TAATTCCCTGAAAAAGACGGTGT 9771 | ||| ||||| || || | |||||||| ||||| |||| | ||| | Sbjct 9209 ACCACATAGGAACATGTTCCCACCATAGACCAATCCATAATT---TGAAGCATT-GGTCT 9264 Query 9772 TTTAC-TTCATGATATTGGATTCTACTATAAGCCCTAGTATCAAAAATATAATCATTACA 9830 | || || | ||||| ||| | ||| ||| ||| |||||| | |||||||||||| Sbjct 9265 TGTATATTGTTCATATTTGATATTGCTAAAAGTCCTCTCATCAAATACATAATCATTACA 9324 Query 9831 GATTTTTACTAATGT--TTGATATCCAATTAAAAAATGTGGCGGCGGTAGGCCATA-ACA 9887 || ||| || ||| ||| ||||| | |||||||| || || || | |||| | | Sbjct 9325 CTTTCTTAATA-TGTAATTG-TATCCTAACAAAAAATGAGGTGGTGG--GTACATATATA 9380 Query 9888 AGGCCAGTTGTTTACTGCAGGCTGGCGAATTC---CTAGATTGTGTAGCATTAAACGAGG 9944 ||| | ||| | || || | | || | | ||| ||||| | | Sbjct 9381 AGGGCCAATGT--AATGTTGGAGGACTTCTTGGGGCCAAATTTAAAAGCATAGTTCTTTG 9438 Query 9945 ATAATGGTAAATATATCTTGACATCCACGTAACACCATTGGCTGTTATTGAAGCTCTAGC 10004 ||||| || ||||| | |||||||| | | |||| | ||||| || || | | Sbjct 9439 ATAATCATAGATATACGTAGACATCCATTTTAAACCAGCGCTAGTTATGGATGCCCGTGT 9498 Query 10005 ATAGTTTCTGA-CTTGATTCCAAATATTTCGTAGAGGTTGAAATATTTCCATCGTTTGCA 10063 ||||| ||| | | |||||||||||||| | ||| |||| | |||||| || || | Sbjct 9499 CCAGTTT-TGAGCATTGTTCCAAATATTTCGCTGCGGTCGAAAAAGTTCCATAGTATGAA 9557 Query 10064 AGTTTTGTCCCGTAAGGCGGGCGCAGTCATAAGCACTCTG-AAAGAA-AAATATAACCTT 10121 | ||||||| ||||| || || || || | ||| |||| |||||| | |||| ||||| Sbjct 9558 CGGTTTGTCCAGTAAGTCGCGCACACTCCAATGCATTCTGAAAAGAAGACATATGACCTT 9617 Query 10122 TCAGATGCATCCAGCGTTGCGGCAGATGAAA 10152 |||||||||||| | | || || |||||| Sbjct 9618 TCAGATGCATCCTGTACTTCGACATATGAAA 9648 Score = 116 bits (128), Expect = 7e-22 Identities = 524/814 (64%), Gaps = 51/814 (6%) Strand=Plus/Plus Query 8374 ACTCGCCTGTTGATGTCTTGAATT-CTTTGATTCTGAGTGAAAACCACCGGCCCTGTTGT 8432 |||| || || |||| |||||| || || ||||| | ||| | ||||| || || Sbjct 7889 ACTCTCCGATTTATGTTCTGAATTTCTCTG-TTCTGGGAGAATATTACCGGACCCGTCAC 7947 Query 8433 TTTGAACCTAAAAGAAATTTCAATAGAATCAATTTCTGCATCATTAATTGCAACTTGTCG 8492 |||||| || ||||| | ||||| |||||||||||| ||||||||| ||| ||| Sbjct 7948 TTTGAATCTGAAAGATAATTCAACAGAATCAATTTCCATATCATTAATGTTAACCTGTTC 8007 Query 8493 CAATATTTCGGTTATATCCCCACTATTTTCTTGATAAGAAATATCTGCCATAAATTGATC 8552 | ||| || || | || |||||||||||| | || ||||| ||||| |||| Sbjct 8008 TAGTATATCTTGAATGCCTCCGCTATTTTCTTGAAATGATATATCACTCATAAGCTGAT- 8066 Query 8553 AACTTCTTCATCTTCCATTTCTCCCTGACCAGCTCTTTCTATAGTGGCTGCTAGGTCAAC 8612 || || || | | | | | |||||| ||| | | || | || ||| Sbjct 8067 --CTAGGTCCTCGGCAGTGTGTTGATTTTCAGCTCGTTCCACAATGCCGCTTAAATCACG 8124 Query 8613 ACTTATTCGACGCATTAAATTA-ACAAAAGCT--TGAAGTCCATGTTCATGCCATACTCT 8669 | | ||||| | || ||| | | || ||| ||| ||||| | | ||| | ||| Sbjct 8125 AGTGATTCGCCTCA-TAAGTGAGGTGAATGCTCCCGAA--CCATGGTTGTTCCACAGTCT 8181 Query 8670 GTTATAAACAATTTGACCTTGATCAGTCCTAGCTCTTAAAATTACTTGAGCTAAATTTAA 8729 | || | | | | |||| ||| | | ||||| | |||||||||||||||||| | Sbjct 8182 GGTAAACATTACTCTCCCTTCATCTGATCGGGCTCTCAGAATTACTTGAGCTAAATTAAC 8241 Query 8730 TTCAACATGTCTA--------GCTAGTACCCGCTGATTCAAAGCATGATTTAAATAATTT 8781 | |||||| | ||||| | |||| ||| | || |||||||||| Sbjct 8242 ATTTACATGTTGATTAAAAGGCCTAGTTGC----GATT-AAAACGGAATGTAAATAATTT 8296 Query 8782 AAAGTAGTGGCAATATGTTCAGCAGTaaaaaaaTAAATGACCCATCTTCGTAGTGTTAAT 8841 || || || ||||| ||||| || ||||||| ||| ||||||||||| | | Sbjct 8297 AATGTTGTAGCAATGTGTTCTGCTATAAAAAAGTAAGTGACCCATCTTATCAAAAATGGC 8356 Query 8842 TCAGTAATATTTCCC---ATTGCCTCTATTCTTTGCATTGTTTCATAAAAATAAGGAGCA 8898 || | || ||||| || | | ||| ||| |||||||||| | | | Sbjct 8357 TCTGAAA---TTCCCTCTATAATGTGCACTCTAGTCATGATTTCATAAAAGGTAATTGGA 8413 Query 8899 AAATTAAAAAATTGATGTTGTCTTGCTGTTACTGTTAGTTCATCTTCCAATGCTCTTATA 8958 || ||||||| || | | ||| | | || ||||| || | |||| | ||| Sbjct 8414 AATCTAAAAAACTGTTCCTCCCTTTCGGAAGAGGTAAGTTCCTCCTGCAATAGCCGAATA 8473 Query 8959 ACATCCGCTATAGCATTCCTCACTTCTTCATTAAAAGATGGTAATTCT---TCTTC--CA 9013 || | || || | | |||||||| ||| ||| |||| | |||| |||| || Sbjct 8474 ACCGCGGCAATTGTTTCCCTCACTTGATCACTAA---ATGGGATTTCTGGACCTTCTACA 8530 Query 9014 TTATT---TCCACT-TCAGGTG---AAGGGGGTGGAAGTGG---ACGACGTTTTCTTTTA 9063 | | | | |||| |||| || |||||| | | |||| ||||| ||| | Sbjct 8531 TCACTGGCTTCACTCTCAGATGTGCTAGGGGGAGAAGGTGGCGCGCGACGCCTTCGTCGC 8590 Query 9064 GGT---AAAGGAAGACTTTCTATAAATCTTTGCACCATTTCTCCTCGTCTTCGGCGCATT 9120 | | || || | ||||||||||||||| || || | |||||||| | || |||||| Sbjct 8591 GTTCTAAATGGCAAACTTTCTATAAATCTCTGAACTACTTCTCCTCTGCGACGTCGCATT 8650 Query 9121 TCTTCTGTAACAGCTCTACCATTTTCTCTTGGTC 9154 |||||||| || ||||| || ||||||||||| Sbjct 8651 TCTTCTGTCACTGCTCTTCCTCCTTCTCTTGGTC 8684 Score = 111 bits (122), Expect = 3e-20 Identities = 303/470 (64%), Gaps = 0/470 (0%) Strand=Plus/Plus Query 5335 ACATTTATCACATACTGTATTTTTTAAAGCATATAATTTTGGTGCTaaaaaaaCTGATTC 5394 ||| ||||| || | | | ||||| |||||| | ||||| |||||||| || || | Sbjct 4880 ACAGTTATCGCACCATATTTCTTTTAGAGCATACATCTTTGGAGCTAAAAACACAGACTT 4939 Query 5395 AGAGCTATAAGCATCATTACCACATTTTTCACATTGAGTTTCACATTCTACTAACCATGT 5454 | | ||| || | | ||| ||| ||| || |||||||||||||||||||| Sbjct 4940 TGGGGCATATGCGGGCTGATTACAGCGTTCGCATCTTGTCTCACATTCTACTAACCATGT 4999 Query 5455 TAAACTTGGATTATCTGGATCAAAAACAAGNNNNNNNNNNNNNNNNNNGATCCGATTTTT 5514 ||| |||| || |||||| | | | | || || Sbjct 5000 TAAGGAAGGATCATGCTCATCAAAGATTAAATTATTGCTGTTTTCTTTAAGTCTATGCTT 5059 Query 5515 ACCTTTAGTTTCCATTAGTTTATGTCCAATTTCGGTGACAAATATGCTGTCAGTATCTCC 5574 |||||| || ||||| ||| |||| || |||| || || || | |||||||||||||| Sbjct 5060 ACCTTTGGTCTCCATCAGTCTATGCCCTGTTTCTGTCACGAACAAACTGTCAGTATCTCC 5119 Query 5575 GTAGACAGATTTGATTGATCTTTCTTCTAGAGGTATTCCTAGATCTTCTTCATAAAGAAA 5634 ||| | ||||| | ||| || |||| ||| |||||| ||| | ||| Sbjct 5120 GTAAATCGATTTTAAAATTCTGCGGTCCCAAGGTCGTCCCCAATCTTCAGAATATAAAAA 5179 Query 5635 ACCAGCCCATTCTGATACAAAGGCTCGCGTCCAAGCCAATACAAATGAGGCAATTTGAGA 5694 | |||||||| || || || || ||||| || | |||||||| || ||||| || Sbjct 5180 TTCCGCCCATTCGGAAGTGAAAGCGCGGGTCCAGGCGAGAACAAATGACGCGATTTGGGA 5239 Query 5695 TGGGTATTTATTATTAACAATAAGTGGTGAAtttttttCTAAAGTATGTAAACACATGTC 5754 |||||| |||||| | || |||| ||| | ||||||| | || | || | || Sbjct 5240 TGGGTAGCGGTTATTATCTATTTGTGGGGAAGTATTTTCTATCATTTGAAGGCATAGGTG 5299 Query 5755 TTGTTCTTCCGAATCTAAAAATGTGATTGGTTTATATTTATAAGTGACGT 5804 || || || | || || |||||||| ||| | ||||| || |||| Sbjct 5300 AGAATCGTCAGATTGCAAGAAAGTGATTGGCTTAAACTTATATGTCACGT 5349 Score = 104 bits (114), Expect = 5e-18 Identities = 154/216 (71%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 7699 AAAAGGTACTAGTTGTTTTCCAAATTTTCCATGCCAAGTATAGGTTTCTACATCATATGT 7758 ||| || | || |||||| ||||| ||||||||| ||||| ||||| | ||||| || Sbjct 7250 AAATGGAATTAATTGTTTGCCAAAGGCTCCATGCCAGGTATAAGTTTCAATGTCATAAGT 7309 Query 7759 AATAAAAAGTCTTTCTGTA-GATTTACAAGATCCTATTGGAAAAAATTGAATGTTTTCCC 7817 ||| | | | || |||| || |||| || || || |||||||| || |||| || Sbjct 7310 GATATAGACACGTTGTGTATGACTTACG-GAGCCAATGGGAAAAAAAGATATTTTTTTCC 7368 Query 7818 ACCACTGAGCCGATTGAGTATTAATTTGATGAAAGTAATAGTCTCTTCTTCTTGCTGAAC 7877 |||| | | | | || ||| | || ||||| ||| | ||||||||||| |||||| Sbjct 7369 ACCAGTCACATGTTGAAGAATTTACATGGTGAAAATAAAAATCTCTTCTTCTGACTGAAC 7428 Query 7878 AGGTGTGAGAATTCTTAAAACATCTACCACAATATT 7913 | | || | || |||||| | ||||||||| ||| Sbjct 7429 ATGAATGCGTGTTTTTAAAAAAACTACCACAAAATT 7464 Score = 95.1 bits (104), Expect = 2e-15 Identities = 299/461 (65%), Gaps = 2/461 (0%) Strand=Plus/Plus Query 13954 TTATAGAAGTTGGTTTTTAGCATATAATTTTGGACCAGAAAGTGGGTTAAAAAGCACTAT 14013 ||| |||||||||| |||||||||||||| || || | |||| | ||| | | Sbjct 12858 TTACAGAAGTTGGTATTTAGCATATAATTACGGTCCTCCAGATGGGGTTAAATCTAAAAC 12917 Query 14014 GCTGTTAACCAATCCAGATGTTACATGTGGAGTTGAACAGGTTTATTGGAGTTTACCAGA 14073 || ||||| | |||||||| |||||||| ||||| | || ||||| | ||||| Sbjct 12918 ACTTTTAACAACCCCAGATGTCACATGTGGTCCCGAACAAATATACTGGAGCCTTCCAGA 12977 Query 14074 TATGACTGTAAATCCTGTAACTTTTAAGTC-AAGTCAAAATTCTAACAATTTTCCAGTTG 14132 ||| | | | |||||| | ||||| | | | || || ||||| | || |||| Sbjct 12978 TATAGTTCAAGAACCTGTATCCTTTAAACCTACCTTTAAGTTGGAACAA-ATGCCTGTTG 13036 Query 14133 TTGGAACAGAAATGCTACCATTACATTCTAGAAGTTTTGTAAACCCTCTTGCTGTTTACT 14192 | ||| |||| || | || || | | || || | ||| | | ||||| || | Sbjct 13037 TGGGAGTAGAATTGTTGCCGCTAAAAGCCAGGGCGTTCTTTAACGCCCAGGCTGTGTATT 13096 Query 14193 CTCAAATGGTTGAAGGGACAACTAATCAAACCCACGTTTTTAACCGTTTTCCTGAAAACC 14252 | || ||| | | | ||||| ||||| || || || || | |||||||| || | Sbjct 13097 CGCAGATGTTAGCGGATTCAACTTCGCAAACACATGTCTTCAATAGATTTCCTGATAATC 13156 Query 14253 AGATTTTGATGCGCGCACCGGCTTCTGGTATAACAAGTATCAGTGAAAACGTTCCGACCC 14312 | || || || || |||| ||| | || ||||| |||||||| || | Sbjct 13157 AAATCTTAATCCGTCCACCAGCTCCCACAATTTGCTCCATCAGCGAAAACGTGCCATCTT 13216 Query 14313 TTACAAACCACGGAATCTTACCGCTGCAGAACAACATTCCAGGTGTTCAGCGCGTAGTGC 14372 | || | ||||||| | | | |||| | |||| | || | ||||| ||| | Sbjct 13217 TGACGGATCACGGAACAATTTCTTTAAAGAATAGCATTACTGGGATACAGCGTGTAATTT 13276 Query 14373 TAAACGACGCCAGGCGCAGAACGTGTCCTTACGTATACAAA 14413 ||| |||||||| | |||||| ||| |||||||| ||| Sbjct 13277 TAACAGACGCCAGAAGAAGAACGGTTCCATACGTATATAAA 13317 Score = 84.2 bits (92), Expect = 4e-12 Identities = 106/145 (73%), Gaps = 8/145 (6%) Strand=Plus/Plus Query 22720 TATGAATCTTTATTGTTTTGTCCTATTACACCCCCCAAGCGTGaaaaaaaTGGCGTGTGT 22779 |||||||||||| |||| || | ||| || |||||| ||| ||||| |||||| Sbjct 20125 TATGAATCTTTAATGTTCACCCCAGAAAAACCTCCAAAGCGTCAAAGTAATGGAGTGTGT 20184 Query 22780 GAAGCAAAC----CCAAAACTTAATTTTTATCCACCTTTTATGGTGCCAGAACTTTTGGC 22835 ||| | || ||| | ||||| |||||||||||||| || || ||| | ||||| Sbjct 20185 GAACCTAATGTGGCCA----TCAATTTCTATCCACCTTTTATTGTTCCCGAATTATTGGC 20240 Query 22836 TACTTATCATATATTTTTTCAAAAT 22860 | || ||||||| || ||| ||||| Sbjct 20241 TTCTCATCATATTTTCTTTGAAAAT 20265 Score = 80.6 bits (88), Expect = 5e-11 Identities = 68/84 (81%), Gaps = 0/84 (0%) Strand=Plus/Plus Query 25231 CCCACGCCCTATGTTTGGTCTTATCAACCACAAATGGGAGTGGCGGCGGGTGCTTCCCAA 25290 || ||||||||||| ||||| |||||||||||| | || ||||| | || || | ||| Sbjct 22388 CCTACGCCCTATGTGTGGTCCTATCAACCACAATTAGGTGTGGCTTCCGGCGCCGCTCAA 22447 Query 25291 GATTACTCAACAAGAATAAATTGG 25314 |||||||||||| | || |||||| Sbjct 22448 GATTACTCAACATGTATTAATTGG 22471 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 101268740354886