Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dipodomys_20ordii_20[refseq_20GCF_5F000151885.1_202014-12-12]
65,193 sequences; 2,236,368,823 total letters
Query= NC_024684.1
Length=32965
Score E
Sequences producing significant alignments: (Bits) Value
seq4931 140 7e-29
>seq4931
Length=27746
Score = 140 bits (154), Expect = 7e-29
Identities = 188/262 (72%), Gaps = 0/262 (0%)
Strand=Plus/Plus
Query 16531 ACATTGGGGCAAGGTGGTCTCTGGATGTGATGGATACAGTTAACCCGTTCAACCATCACA 16590
|||| || | |||||||| | ||||||||||| || ||||| || || || |||||||
Sbjct 16719 ACATAGGAACCAGGTGGTCAATAGATGTGATGGACACGGTTAATCCATTTAATCATCACA 16778
Query 16591 GAAACACGGGACTGAAGTACAGATCTCAATTGCTGGGCAACGGCAGGTACTGTGATTTCC 16650
|||| || || ||| |||||| ||||| | | || || || | || | || |
Sbjct 16779 GAAATACTGGTTTGAGGTACAGGTCTCAGCTATTAGGAAATGGTCGCTATGCTTCCTTTC 16838
Query 16651 ACATTCAAGTGCCGCAGAAGTTTTTTGCCATCAAAAATTTGCTGCTCCTCCCTGGAACTT 16710
| ||||| || ||||| ||||||||||| | |||| |||||| || || || ||| | |
Sbjct 16839 ATATTCAGGTTCCGCAAAAGTTTTTTGCACTTAAAAGTTTGCTTCTGCTACCGGGATCGT 16898
Query 16711 ACAACTACGAGTGGTATTTCAGGAAGGATCCCAACATGGTCTTGCAGTCTACCTTGGGAA 16770
||| ||||| |||| ||| || || ||| |||||| | |||||| ||| | || |
Sbjct 16899 ACAGTTACGAATGGTCTTTTAGAAAAGATGTAAACATGATTTTGCAGAGTACTCTTGGCA 16958
Query 16771 ATGACCTTAGAGCAGACGGGGC 16792
|||| || || | ||||| ||
Sbjct 16959 ATGATCTGAGGGAGGACGGAGC 16980
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 105284828823382
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |