Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dipodomys_20ordii_20[refseq_20GCF_5F000151885.1_202014-12-12] 65,193 sequences; 2,236,368,823 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq17 84.2 5e-11 >seq17 Length=26966924 Score = 84.2 bits (92), Expect = 5e-11 Identities = 97/131 (74%), Gaps = 0/131 (0%) Strand=Plus/Plus Query 131857 AAGACTTGTAGCTTTTGCTTGTGTTGAAGGTATATTCTTTTCAGGTGCTTTCTGTGCTAT 131916 |||| | || || |||||| || ||||| | ||||| || || |||| |||||| Sbjct 9450874 AAGAGTGGTGGCCTTTGCTGCAGTAGAAGGAGTTTTCTTCTCTGGATCTTTTGCTGCTAT 9450933 Query 131917 CTTTTGGCTTAAGAAGCGTGGATTGATGCCTGGACTCTCATTGTCCAATCAATTCATCTC 131976 || ||||| |||||| | || | |||||||||||| | || |||||| || ||||| Sbjct 9450934 ATTCTGGCTAAAGAAGAGAGGCCTCATGCCTGGACTCACTTTTTCCAATGAACTCATCAG 9450993 Query 131977 GAGAGATGAAG 131987 |||||||||| Sbjct 9450994 CAGAGATGAAG 9451004 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1185821472699473