Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dipodomys_20ordii_20[refseq_20GCF_5F000151885.1_202014-12-12] 65,193 sequences; 2,236,368,823 total letters Query= NC_027016.1 Length=226084 Score E Sequences producing significant alignments: (Bits) Value seq57 89.7 7e-13 >seq57 Length=13896254 Score = 89.7 bits (98), Expect = 7e-13 Identities = 99/132 (75%), Gaps = 0/132 (0%) Strand=Plus/Plus Query 214092 TGGGTAACGAGATGTTTGGACTCGTGCCCGGTTTCATGGTGTACGCCATTATCTGGCTGA 214151 |||| | ||||| ||||| || || || ||| | ||| |||| |||| |||||||| Sbjct 6722555 TGGGGCAGGAGATCTTTGGTCTGGTACCTGGTCTGATGATGTATGCCACCATCTGGCTTC 6722614 Query 214152 GAGAGCACAACAGGGTTTGCGACGTGCTGAAACAAGAGCACCCGGAATGGAACGACGAAC 214211 |||| |||||| | || || || ||||| ||||||||||| || || ||| | || || | Sbjct 6722615 GAGAACACAACCGAGTGTGTGATGTGCTTAAACAAGAGCATCCAGAGTGGGATGATGAGC 6722674 Query 214212 AGCTGTTCCAGA 214223 ||||||||| Sbjct 6722675 GCTTGTTCCAGA 6722686 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 722751340540320