Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dipodomys_20ordii_20[refseq_20GCF_5F000151885.1_202014-12-12] 65,193 sequences; 2,236,368,823 total letters Query= NC_027708.1 Length=31848 Score E Sequences producing significant alignments: (Bits) Value seq4931 735 0.0 >seq4931 Length=27746 Score = 735 bits (814), Expect = 0.0 Identities = 1515/2218 (68%), Gaps = 74/2218 (3%) Strand=Plus/Plus Query 17954 GCGCCAAATAGATGCAACCACATTGGATTCAGAGACAATTTTATAGGGCTAATGTATTAT 18013 |||||||| || || | || || || || || || ||||| ||| |||||| |||| Sbjct 16142 GCGCCAAACAGGCCAAATTATATAGGTTTTAGGGATAACTTTATCGGGTTAATGTTTTAT 16201 Query 18014 AACAGCAATGGCAATTTGGGAGTGCTGGCGGGCCAGTCCTCTCAACTTAATGCTGTGGTG 18073 ||||| ||| |||||||||| || | || || || || || || ||||||||||| | Sbjct 16202 AACAGTAATAGCAATTTGGGTGTATTAGCCGGTCAATCGTCACAGCTTAATGCTGTCATC 16261 Query 18074 GATCTGCAGGACAGAAATACTGAACTGAGCTATCAGTTGCTCTTGGATGCTATTACA-GA 18132 || || || ||||||||||| ||| || |||||| | | || ||| | ||||| || Sbjct 16262 GACCTTCAAGACAGAAATACAGAATTGTCATATCAGCTTATGTTAGATAAT-TTACACGA 16320 Query 18133 CAGAACTAGATATTTTTCTTTGTGGAACCAAGCTGTGGACAGTTATGATTCAGATGTTAG 18192 |||||| |||||| |||||||| ||||| ||||| |||||| |||| || | Sbjct 16321 TAGAACTCGATATTACAGCTTGTGGAATCAAGCCGTGGATTCATATGATCCAGAGGTCCG 16380 Query 18193 AATTATTGACAATCACGGAGTGGAGGATGACATGCCCAATTATTGTTACCCTCTAAGCGG 18252 ||| || |||||| ||||| || || || | || |||||||| | || || || Sbjct 16381 AATCATAGACAATATTGGAGTAGAAGACGAACTTCCAAATTATTGCTTTCCGTTATCTGG 16440 Query 18253 -TGTTGGAAATTTGGAAGACTTAACGCCCATGAAAGTTAATGGGGGAAACAATGGTTTTG 18311 |||| ||| | | || | | || ||||| || |||| | Sbjct 16441 ATGTTCTCCTATTG----ATTATACTGCTGTTAATCAAAATGGAC-AAGCAATCAAT--- 16492 Query 18312 AACAAGATCAAGACAATGTACAGGGATTTCAAAAAGTAGCATTTGGCAACGTCAGGGCCA 18371 ||||| | || || |||| ||| | || ||| || || || || Sbjct 16493 AACAATA-----ACCCTGCGCAGG---TTCTTATAG--GCAAA-GGAAATGTTGAATGCA 16541 Query 18372 TGGAAATTAACCTCAATGCTAATTTGTACAAGAGTTTTCTGTATTCCAACATTGCTTTGT 18431 ||||||| ||| | || || ||| |||| |||||||||||| || || || ||| Sbjct 16542 TGGAAATCAACATAGCGGCCAACCTGTGGAAGAATTTTCTGTATTCTAATATCGCGCTGT 16601 Query 18432 ACTTGCCAGACAACTTTAAATACACCCCAGAAAATGTGCTGGAGCCGGCCAACAAAAACA 18491 | |||| || ||||||||| ||| || | ||||||| | |||| || | | | Sbjct 16602 ATCTGCCCGATAACTTTAAAACCACTCCCGCAAATGTGGTATTGCCG--CAGGATCAGCG 16659 Query 18492 CCTAT--GCCTACATGAATGTCAGGC-TGCCATTCGCTAACCTAATTGACACTTATGTCA 18548 |||| || ||||||||| || || | ||| || || | || |||| ||| Sbjct 16660 GCTATATGCTTACATGAAT-TCTCGCATTCCAGCCGGGGGTCTGGTAGAGGATTATATCA 16718 Query 18549 ACATTGGGGCTCGTTGGTCACCTGATGTCATGGACACAGTCAACCCTTTTAATCACCACA 18608 |||| || | | |||||| ||||| |||||||| || || || |||||||| |||| Sbjct 16719 ACATAGGAACCAGGTGGTCAATAGATGTGATGGACACGGTTAATCCATTTAATCATCACA 16778 Query 18609 GAAACACTGGGCTCAGATACAGATCTCAGTTGCTGGGCAACGGGAGATACTGCT-CGTTC 18667 |||| ||||| | || ||||| |||||| | | || || || | || |||| | || Sbjct 16779 GAAATACTGGTTTGAGGTACAGGTCTCAGCTATTAGGAAATGGTCGCTA-TGCTTCCTTT 16837 Query 18668 CACATTCAGGTTCCTCAAAAGTTTTTTGCCATTAAAAACCTGCTCTTGCTCCCTGGGACC 18727 || ||||||||||| |||||||||||||| |||||| |||| |||| || || | Sbjct 16838 CATATTCAGGTTCCGCAAAAGTTTTTTGCACTTAAAAGTTTGCTTCTGCTACCGGGATCG 16897 Query 18728 TACAACTATGAGTGGTCTTTCAGGAAAGATGTCAACATGATTTTGCAGAGCAGTTTGGGC 18787 |||| || || |||||||| || |||||||| ||||||||||||||||| | | | ||| Sbjct 16898 TACAGTTACGAATGGTCTTTTAGAAAAGATGTAAACATGATTTTGCAGAGTACTCTTGGC 16957 Query 18788 AATGACCTTCGAGCTGACGGGGCCACTATTCACATTC-AGAGTGTGAACCTCTATGCTAG 18846 ||||| || | | ||||| || | | | ||||| | || | | ||| | ||||| Sbjct 16958 AATGATCTGAGGGAGGACGGAGCGTC-AGTAACATTTGACAGCATTAGCCTATTTGCTAC 17016 Query 18847 TTTTTTCCCCATGGCCCATAACACCGCCTCTACTTTGGAGGCCATGCTCAGAAATGATGT 18906 ||| || || ||| | |||||||| || |||||| |||| | ||||| | ||||| || Sbjct 17017 TTTCTTTCCGATGTCTCATAACACTGCTTCTACTCTGGAAACTATGCTTCGCAATGAGGT 17076 Query 18907 CAATGATCAGACATTTGCAGATTACCTTTCCTCTGCCAACATGCTGTACCCCATTCCTCC 18966 || |||||| | || | || || |||||| | |||||||| || | |||||||| Sbjct 17077 TAACGATCAGTCCTTCGGCGACTATCTTTCCAGCGTTAACATGCTTTATGCTATTCCTCC 17136 Query 18967 AGGAACCACCAACC-TGCCCATTTCTATTCCAGCCAGAAACTGGGCGGGCTTTAGAGGAT 19025 | | | | |||| |||| || ||||||||||| || || ||||||| ||||||||| | Sbjct 17137 -GCATCAAACAACAGTGCCTATCTCTATTCCAGCAAGGAATTGGGCGGCCTTTAGAGGTT 17195 Query 19026 GGAGCTTTACCCGGCTTAAGGCTAAGGAAACTCCGGCCATTGGCTCAGCCTTTGACCCGT 19085 || ||||| | || || ||||||| || |||||||||| || |||||||| | Sbjct 17196 GGGCATTTACTAGACTAAAACAACAGGAAACACCAACCATTGGCTCTGCATTTGACCCAT 17255 Query 19086 ATTTCACCTACTCTGGGTCAGTGCCCTATTTGGATGGCTCTTTTTACCTCAGCCACACTT 19145 | || | ||||| || ||| | || |||| ||||| | ||||| | |||||| Sbjct 17256 ACTTTAGGTACTCGGGCTCAATCCCGTATTGGGATGCGACCTTTTATTTATCTCACACTA 17315 Query 19146 TTAGGCGAGTGTCTATCATGTTTGACTCCTCAGTGTCTTGGCCAGGAAATGACAGACTGC 19205 | || ||| | || |||||| || ||||| |||||| |||||||||||||| Sbjct 17316 TCAGAAAGGTGGCCATACAGTTTGATTCTTCAGTAAGTTGGCCTGGAAATGACAGACTTT 17375 Query 19206 TAACTCCTAATGAATTTGAAATTAAAAGATATGTGGATGGGGAAGGCTACAACATGGCCC 19265 ||| |||||||||||| | || |||||| | ||||| | ||||||||| |||| | | Sbjct 17376 TAATACCTAATGAATTTCACATAAAAAGAGAGGTGGACGCGGAAGGCTATAACACCTCTC 17435 Query 19266 AATCCAACATGACCAAAGATTGGTTCATGGTTCAAATGCTGGCCCATTATAACATAGGAT 19325 | || || || || ||||||| ||| |||||||||| || || || || || |||| Sbjct 17436 AGAGCATAATTACTAAGGATTGGTATATGATTCAAATGCTCGCTCACTACAATATCGGAT 17495 Query 19326 ACCAAGGCTATCACTTGCCCGAATCCTATAAGGACAGGATGTATTCCTTTTTGAGGAATT 19385 ||||||| | |||| | ||| | ||||| || || ||||||||||||| || |||| Sbjct 17496 ACCAAGGTTTTCACCTACCCACAGATTATAAAGATAGATTGTATTCCTTTTTAAGAAATT 17555 Query 19386 TTGAACCCATGTGCCGCCAACTAGTGGATGTGCAGAATTATGCAGCCTACCAAGCCG-TC 19444 ||||||||||||| | ||| | |||||| || | | || ||| ||| | Sbjct 17556 TTGAACCCATGTGTAGACAAGTTGTGGATCCTGGTAAGACGGAAAAATATCAACCCGTTG 17615 Query 19445 CTCATTAAAAATCAACACAACAACTCAGGGTTTGCCAGCGCCTTTTCAGCTGCCAATCCC 19504 ||| ||||| |||| || || || ||||| ||| | | | || | | || | Sbjct 17616 CTC-TTAAATATCAGCATAATAATTCAGGTTTTAAAAAC-CATTAT--GGACCCTTTGGG 17671 Query 19505 CGAGAGGGGCACCCCTACCCAGCTAACTGGCCCTATCCGTTGGTGGGCGCCACGGCCGTG 19564 ||| | || || || || || ||||||||| | ||| | | || | ||| | Sbjct 17672 CGACAAGGCCATCCTTATCCCTGTAACTGGCCTTTCCCGCTCATCGGAGAACAGGCAGGT 17731 Query 19565 CCTTCGGTGACCCAGAAAAAGTTTTTGTGTGACAGGACTCTGTGGAGAATTCCCTTCTCC 19624 | | || |||| ||| ||||| |||||||| || |||||||| ||||| |||||| Sbjct 17732 AAAACCATTACTCAGAGAAAATTTTTATGTGACAGAACACTGTGGAGGATTCCGTTCTCC 17791 Query 19625 TCCAACTTTATGTCCATGGGGACCCTGACAGATTTGGGTCAAAACTTGCTGTATTCCAAC 19684 |||||||||||||||||||| || || |||||| |||| ||||| ||||| ||| | || Sbjct 17792 TCCAACTTTATGTCCATGGGAACACTAACAGATCTGGGACAAAATTTGCTATATGCAAAT 17851 Query 19685 TCGGCTCACGCCCTGGACATGACCTTTGAAATGGACGAAATGAATGAGCCCAC---ACTC 19741 || ||||| || | |||||||| | ||| | || |||| | || || || ||| Sbjct 17852 TCAGCTCATGCTTTAGACATGACAGTCGAAGTAGATTCAATGGAGGAACCAACTTATCTC 17911 Query 19742 TTGTATGTTTTGTTTGAAGTGTTTGACGTGGCCCGAGTTCATCAGCCTCACCGGGGGGTC 19801 || ||| | |||||||| |||||| || | |||| ||||||||||| || || ||| Sbjct 17912 ATG-ATG--CTATTTGAAGTATTTGACATGTGCAGAGTGCATCAGCCTCAACGAGGTGTC 17968 Query 19802 ATTGAGGTGGTGTACTTGCGGACACCCTTCTCTGCTGGCAACGCTACCACATAAAACAAT 19861 || || || | || | | || ||||| || || || ||||| | ||||| ||| Sbjct 17969 ATAGAAGTTATTTATCTAAGAACCCCCTTTTCGGCAGGTAACGCCGCAACATA----AAT 18024 Query 19862 AAAAACATGGCCGACGGGGGTTCCTCGGAAGATGAGCTGAAAGCCATTGTTAAAAATTTA 19921 | ||| |||| || || || | ||| ||| | |||| Sbjct 18025 A---------------TGGGGACCTCAGAGGACGAAATAAAACGAATTATCTCCGATTT- 18068 Query 19922 GGAGTGGATCCCTATTTTCTGGGCACTTTTGATAAAAGGTTTCCAGGCTTTATCTCCTCC 19981 || || | || | |||| |||| || | ||||||| | ||||| || |||||| Sbjct 18069 -GAATGTA-CCTTGTTTTTTGGGTACCTATGATAAACGCTTTCCGGGGTTTATCCGAAAG 18126 Query 19982 CAGCGCTTAGCCTGCGCCATTGTCAACA-CAGCCGGCAGGGAGACGGGGGGAGTGCACTG 20040 | | ||| ||| |||||||| |||| | | | | | ||| ||| || || || || Sbjct 18127 GACAGGTTATGCTGTGCCATTGTAAACACCGGGCTTCGCGAAGA-GGGCGGTGTCCATTG 18185 Query 20041 GCTGGCGATGGGCTGGAATCCCAGGGCTAAAACATTTTATATGTTTGACCCCTTTGGATT 20100 | | ||| | | ||||||||| |||||||||||| |||||||| || || ||||| Sbjct 18186 GATTGCGTTTGCTTGGAATCCCTATATTAAAACATTTTACATGTTTGATCCATTCGGATT 18245 Query 20101 CTCAGACAGCAAGCTTT--TGCAAGTGTATCAGTTTGAATATGAAGGACTGCTTAGAA 20156 ||| | | |||| ||| |||| || | || |||||||| || || |||||| Sbjct 18246 CTCGG--ATCAAGATTTGAAAAAAGTTTACAACTTCGAATATGAGCGAATG-TTAGAA 18300 Score = 188 bits (208), Expect = 1e-43 Identities = 511/769 (66%), Gaps = 20/769 (3%) Strand=Plus/Plus Query 3609 ATACAATTTAGCCTGCACATTAAGATACATGGGCATGAGGCCTTCTTGGGGGTTCAGGTA 3668 ||| | ||||| ||| ||||| | |||||| || | | | ||| | | ||| || Sbjct 3537 ATATAGTTTAGTCTGAACATTTAAATACATAGGGGTCAATTCACATTGCGCGCTCATATA 3596 Query 3669 CATCCATTGCATGGCACTGGC-CTCGGGGTTGGTACTATAGGCTATCCAATCATAAGAAG 3727 ||||||||| || | || | | ||| |||| | || | |||||||||||||| | Sbjct 3597 CATCCATTGT-TGACTTTGACACGTAGGGGTGGTGGTGTACACGATCCAATCATAAGATG 3655 Query 3728 TATGCATTCGGTGGTAGTTAAAAATATCTTTCAACAACAGGGTAATAGCGGTGGGGAGAC 3787 || | |||||| ||| |||||||| || || ||||| || || ||| || | Sbjct 3656 AGTGTAAGGAATGGTAGGCAAAGATATCTTTTAATAATAGGGTGATTGCTAAGGGTAGGC 3715 Query 3788 CCTTAGTGTAAATATTAATAAACCTATTAAGCTGGGAGGGATGGACCTTGGGACTCATAA 3847 | ||||| ||| |||||||||| || || ||||| | ||| || | ||||| |||| | Sbjct 3716 CTTTAGTATAAGTATTAATAAATCTGTTTAGCTGAGCGGGTTGCATTTTGGGGCTCAGTA 3775 Query 3848 TATGCATCTTGGCCTGGGTCTTCAAATTGGAGATGTTTCCAGCCATGTCCCTGCGGGGGT 3907 |||| || || || | || | |||| || |||||| | || | || |||| Sbjct 3776 TATGATATTTAGCTTGAATTTTTAGTGTGGATATATTTCCACTTAAATCTTTTCGCGGGT 3835 Query 3908 TCATGTTATGCAACACTACAATCACCGAGTACCCGGTGCACTTGGGGAATTTATCTAGGA 3967 |||| ||||| || || |||| || |||||||| ||||| ||| |||| || | | Sbjct 3836 TCATATTATGTAATACCACAAACAGATAGTACCCGCTGCACGAGGGATATTTTTCAAATA 3895 Query 3968 GTTTGGAGGGAAAAGCATGGAAAAATTTGGCCACTCCTTTGTGACCCCCTAGGTCCTCCA 4027 |||| || ||||| || || |||||||| || | ||| || |||| | |||| Sbjct 3896 GTTTTGAAGGAAACGCGTGAAAAAATTTTGCAATAGGGCTGTTCCCTCCTAAATTTTCCA 3955 Query 4028 TGCATTCATCCATGATGATGGCTATGGGACCAG---TGGCAGCTGCTTTAGCAAACACAT 4084 | || ||||| ||||| ||||||||||| || | |||| || || || |||| || Sbjct 3956 TACACTCATCAATGATAATGGCTATGGGTCCGGTTTTGGCCGC--CTGTA-CAAATTTAT 4012 Query 4085 TCTCGGGGTGGGTCACATCATAGTTTACTTCATTGGTCAGATCTGCATAGGACATCTGAA 4144 | | || || | |||||| ||| |||| || ||||| || || | || Sbjct 4013 TATTTGGATGCCCTAAATCATAATTTTCTTCGTTTAAGAGATCCTTGTACGATAGTTGCG 4072 Query 4145 CAAATTCTGGCAAGATA--GCCCCACTTTGGGG---AATGACAGTGTTGTCTGGCCCACT 4199 | ||| || || || | ||| | || || ||| || | ||| |||| | Sbjct 4073 CGAATCGAGG--AGTTAATGTACCAGTCTGAGGCACAATTTCACCAT--TCTTTCCCA-T 4127 Query 4200 CCTATAGTTTCCTTCACAGATCTGTGTCTGCCAAGCGGTGATCTCCTGAGGGGGTATCAT 4259 |||||||||| || || |||| | ||| | | || ||||| ||||| ||||| Sbjct 4128 GTTATAGTTTCCCTCTATAATTTGTGCTTTCCATGACATAATTTCCTGTGGGGGGATCAT 4187 Query 4260 GTTGACATGGGGGGTGATAAAGAACACGGTCTCGGGGGGCGGGA-GAAGCAGCTTGTCAG 4318 || ||| ||||| | |||||| | ||||| ||||||||| | | ||| | Sbjct 4188 GTCTGCATAAGGGGTTACAAAGAATATAGTCTC-CGGGGCGGGATTTAATAATTTGGACG 4246 Query 4319 ACATCAGATTGCGCAACAGTTGGGACTTTCCACACCCCGTGGGCCCATA 4367 |||| ||||| | ||| | |||||| ||||||| || || || ||||| Sbjct 4247 ACATAAGATTTCTCAATAATTGGGATTTTCCACTACCAGTTGGACCATA 4295 Score = 187 bits (206), Expect = 5e-43 Identities = 428/636 (67%), Gaps = 25/636 (4%) Strand=Plus/Plus Query 5647 AAACA--AtttttttGTTGTCTAATTTAGTGGCAAAGGACCCGTACAGGGCGTTAGATAA 5704 ||||| |||||||| || ||||| | ||||||||||| |||||||| ||||| || || Sbjct 5585 AAACAGTATTTTTTTATTATCTAACCTGGTGGCAAAGGAACCGTACAGTGCGTTTGACAA 5644 Query 5705 TAATTTGGCAATGCTCCTCATGGTCTGGTTTTTGTTTTTGTCTGCCTGTTCTTTGGCCTG 5764 | ||| || ||||| | | || ||| | |||||| || || ||||| ||| Sbjct 5645 CAGTTTAGCGATGCTTCGCTGTGTGCTGTTGTGGTTTTTTTCCGCGGCCTCTTTTGCCGC 5704 Query 5765 GATGTTGAGTTGC-ACATATTCTCTGGCTAAGCACTTCCACTCTGGAAAGATGATGGTCC 5823 || || ||| || || |||||||| || | ||| ||||||| ||| | || | Sbjct 5705 TATATT-AGTGGCTACGTATTCTCTTGCCACGCAATTCCACTGCTCAAATAC--TGTAAC 5761 Query 5824 TGGA--ATCTGGCACGATCCTCACTCTCCACTTTCTGTTGTGTAAAGTAATGACATCTAT 5881 | | |||||| || | ||| | |||| || || || ||||||||| |||| || Sbjct 5762 TCGCTCATCTGGGACCAACCTAATCTTCCATCCTCGATTATGCAAAGTAATGGCATCGAT 5821 Query 5882 CGAAGTGGCTATCTCCCCCCTGAGGGGCTCGTTGGTCCAGCACAACCGcccccccTTCTT 5941 || ||| || || || || | || || |||||||| | ||||| || || | Sbjct 5822 GGACGTGCATACTTCGCCTCTTAAATTTTCATTTGTCCAGCAAAGACGCCCGCCTTTTCT 5881 Query 5942 GGAGCAAAAAGGCGGGAGCACGTCCAGAGATTCGGAGGGGGGAGGGTCGGCATCAATGGT 6001 || ||||| ||||| | || || | |||| || || | ||| |||||||| Sbjct 5882 CGAACAAAATGGCGGTAAAACATCTAAGTATTCTTCGGCAGGGGCGTCAGCATCAATTAC 5941 Query 6002 AAAAATGCCTGGCAGCAAGTCTGGGTCAAAATAATCAAT-------CAGGCAGCCCGCCT 6054 || |||| | || | || | | ||||||||||| ||| | || || | Sbjct 5942 AACAATGGCCGGTAACAGGGCAGGGTCAAAATAGGAAATTTTGTCACCGGTTGCAAAGCG 6001 Query 6055 TTTTTAGTTTCACTTCATAGGCCCTGACGGCCAAGGCCCGTTCAAAGGGATTCAAGGGCA 6114 |||| | | ||| |||| || |||||| | ||||||||||| | || Sbjct 6002 TTTTGAAT---ACTG-ATAGA----GA--GCCAAGTTTCTGTCAAAGGGATTAAGTGGTG 6051 Query 6115 TGCCAGATGGCATGGGGTGAGTCAGGGCGCTGGCATACATCCCGCAAATATCATAAACAA 6174 |||| | |||||||| || || | |||||||||||||| ||| |||||||||||||| Sbjct 6052 GGCCAAAGGGCATGGGATGCGTTAATGCGCTGGCATACATTCCGGAAATATCATAAACAT 6111 Query 6175 AGATAGGTTCGGAGTAGATGCCAATGTAAGTGGGGTAACAGCGCCCCCCTCGGATACTGG 6234 | |||||||| | | || |||||||||||||| || || ||||||| ||| || Sbjct 6112 AAATAGGTTCCTCAAAAACACCTATGTAAGTGGGGTAGCACCGTCCCCCTCTGATGCTTT 6171 Query 6235 ACCTGACATAATCATACATCTCTTTAGAGGGGGCCA 6270 || ||| ||||||| || || | || ||||||| Sbjct 6172 CTCTTACAAAATCATAAATGTCGTGTGACGGGGCCA 6207 Score = 140 bits (154), Expect = 7e-29 Identities = 274/405 (68%), Gaps = 0/405 (0%) Strand=Plus/Plus Query 17126 CCGAAGATGGCCACCCCGTCGATGCTGCCACAATGGTCCTACATGCACATTGCAGGCCAA 17185 |||||||||||||| || |||||||| || |||||||| ||| | || || ||||| ||| Sbjct 15308 CCGAAGATGGCCACTCCCTCGATGCTCCCGCAATGGTCTTACTTACATATCGCAGGACAA 15367 Query 17186 GACGCCGCCGACTACTTGTCTCCCGCATTGGTCCAATTTGCACAGGCCACCAGTTCCTAC 17245 || || | || || || ||||| || ||| ||||||||| || ||| | ||| Sbjct 15368 GATGCTTCAGAATATTTATCTCCTGCGTTGTGTCAATTTGCAAGCGCAACCGAAACGTAC 15427 Query 17246 TTTAAATTGGACAATAAGTTTAGAAACCCCACTGTGGCCCCCACTCACGATGTGACTACA 17305 ||| | | |||| |||||||| || || || || || || |||||||| ||||| Sbjct 15428 TTTTCCCTAAGCGATAAATTTAGAAATCCGACGGTTGCGCCGACACACGATGTAACTACG 15487 Query 17306 GAGAGGTCACAGAGGCTGCAGCTGCGCTTCGTGCCCATTATGCATGAGGACAGCCAGTAC 17365 || || || ||||| || || | | || || || | || || | ||||| Sbjct 15488 GAAAGATCGCAGAGACTACAATTAAGATTTGTTCCAGCGGAAAAAGAAGATACACAGTAT 15547 Query 17366 ACCTATAAGACTAGGTTTTCCTTGGCCGTGGGAGACAACAGGGTGTTGGACATGGCCAGC 17425 || | ||| | | ||| | |||| || || ||||| | || || ||| || Sbjct 15548 ACTTTTAAAGCCCGATTTCAACTCACCGTCGGTGATAACAGAATATTAGATTTGGGTAGT 15607 Query 17426 ACCTACTTTGACATCAGAGGCACCCTTGACCGAGGCCCTTCCTTTAAACCCTACAGCGGC 17485 | || ||||| || | || | | ||| |||| || || |||||||| ||||| ||| Sbjct 15608 AGTTATTTTGATATAAAGGGAAAGATAGACAGAGGTCCCTCTTTTAAACCTTACAGTGGC 15667 Query 17486 ACCGCCTACAATCCCTTGGCCCCCAAATCTGCCGTGAACAACACT 17530 || || |||||| | | ||||| ||||| || | ||||| || Sbjct 15668 ACAGCATACAATAACCTTGCCCCGAAATCAGCTTTATACAACTCT 15712 Score = 89.7 bits (98), Expect = 1e-13 Identities = 88/114 (77%), Gaps = 0/114 (0%) Strand=Plus/Plus Query 24308 TAAGATAAAAAACCGCTCCTTGAGATCTCTGCTCAAAAGCTGTCTCTACCACAAAAACGA 24367 ||| || ||||| ||| | || ||||| || ||| |||||||| || ||||||||||| Sbjct 22217 TAAAATTAAAAATCGCACTTTAAGATCACTTACCAAGAGCTGTCTTTATCACAAAAACGA 22276 Query 24368 AGCCCAGTTGCTGCGTACCCAGGACGACGCGGAGGCGCTGCTCAACAAGTACTG 24421 || ||| ||| | | || | ||| ||||| |||||||| || ||||||| ||| Sbjct 22277 AGAACAGCTGCAGAGGACTCTGGAAGACGCAGAGGCGCTACTGAACAAGTGCTG 22330 Score = 84.2 bits (92), Expect = 4e-12 Identities = 132/189 (70%), Gaps = 0/189 (0%) Strand=Plus/Plus Query 7978 CACTCGCCTGTTGATGTTCTGAATCTGCCTGTTCTGAGTAAACACCACAGGTCCCGTGAC 8037 ||||| || || ||||||||||| | |||||||| | || | || || ||||| || Sbjct 7888 CACTCTCCGATTTATGTTCTGAATTTCTCTGTTCTGGGAGAATATTACCGGACCCGTCAC 7947 Query 8038 TTTGAATCTGAAAGAAAGTTCCATAGAGTCAATGTCGACGTCATTGGACGCCACCTGCCT 8097 ||||||||||||||| | ||| | ||| ||||| || | ||||| ||||| Sbjct 7948 TTTGAATCTGAAAGATAATTCAACAGAATCAATTTCCATATCATTAATGTTAACCTGTTC 8007 Query 8098 CAGTATCTCCCCCACGTCCCCACTGTTATCTTGATAAGCAATGTCACTCATGAACTGCTC 8157 ||||| || | | | || || || |||||| | | || |||||||| | ||| || Sbjct 8008 TAGTATATCTTGAATGCCTCCGCTATTTTCTTGAAATGATATATCACTCATAAGCTGATC 8067 Query 8158 CAGCTCCTC 8166 || ||||| Sbjct 8068 TAGGTCCTC 8076 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 101713196005460