Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dipodomys_20ordii_20[refseq_20GCF_5F000151885.1_202014-12-12]
65,193 sequences; 2,236,368,823 total letters
Query= NC_027923.1
Length=132831
Score E
Sequences producing significant alignments: (Bits) Value
seq147 82.4 6e-11
>seq147
Length=2532799
Score = 82.4 bits (90), Expect = 6e-11
Identities = 147/215 (68%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 27033 CGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCG 27092
|||| |||| || | || || || || || || |||||||| | |||| |
Sbjct 2383935 CGCAGGACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAAAGAGTGCGGCCA 2383876
Query 27093 TCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTA 27152
||||| ||||| || || ||| | || || | ||| || || || || | |||||||||
Sbjct 2383875 TCTTCCAGCTGCTTGCCTGCGAAGATCAGCCTCTGCTGGTCAGGAGGGATGCCCTCTTTA 2383816
Query 27153 TCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATA 27212
|| ||||||| |||| | || | || || ||| ||||| |||||||| ||
Sbjct 2383815 TCCTGGATCTTGGCCTTCACATTCTCAATGGTATCACTGGGCTCAACCTCTAGAGTGATG 2383756
Query 27213 GATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247
| ||||| |||| || ||||| ||||| |||||
Sbjct 2383755 GTCTTGCCAGTCAAGGTCTTCACGAAGATCTGCAT 2383721
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 424596772754616
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |