Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dipodomys_20ordii_20[refseq_20GCF_5F000151885.1_202014-12-12] 65,193 sequences; 2,236,368,823 total letters Query= NC_028103.1 Length=32939 Score E Sequences producing significant alignments: (Bits) Value seq4931 486 4e-133 >seq4931 Length=27746 Score = 486 bits (538), Expect = 4e-133 Identities = 1054/1561 (68%), Gaps = 36/1561 (2%) Strand=Plus/Plus Query 19260 ATGGATAATGTTAATCCATTCAACCATCACAGAAATGCCGGCCTGCGTTACCGCTCTCAG 19319 ||||| | ||||||||||| || |||||||||||| | || || | ||| | |||||| Sbjct 16748 ATGGACACGGTTAATCCATTTAATCATCACAGAAATACTGGTTTGAGGTACAGGTCTCAG 16807 Query 19320 CTTTTGGGTAACGGACGCATTGTTCCCTTCCACATTCAAGTACCGCAGAAGTTTTTCGCC 19379 || || || || || ||| || | |||| || ||||| || ||||| |||||||| || Sbjct 16808 CTATTAGGAAATGGTCGCTATGCTTCCTTTCATATTCAGGTTCCGCAAAAGTTTTTTGCA 16867 Query 19380 ATTAAGAACCTTTTGCTGTTGCCTGGTTCTTACACCTACGAGTGGTCCTTCAGAAAGGAC 19439 |||| | | | ||| | || || || |||| ||||| ||||| || ||||| || Sbjct 16868 CTTAAAAGTTTGCTTCTGCTACCGGGATCGTACAGTTACGAATGGTCTTTTAGAAAAGAT 16927 Query 19440 GTTAATATGATTCTCCAGAGCACGCTTGGTAACGATCTGCGAACAGACGGAGCGGCCATT 19499 || || |||||| | ||||| || ||||| || |||||| | ||||||||| | | Sbjct 16928 GTAAACATGATTTTGCAGAGTACTCTTGGCAATGATCTGAGGGAGGACGGAGCGTCAGTA 16987 Query 19500 AGGATCGAAAGCGTAAACCTGTACGCGAACTTTTTTCCCATGGCCCACAACACAGCCTCC 19559 | | || ||| | | ||| | || | || ||||| ||| | || ||||| || || Sbjct 16988 ACATTTGACAGCATTAGCCTATTTGCTACTTTCTTTCCGATGTCTCATAACACTGCTTCT 17047 Query 19560 ACTTTAGAGGCCATGCTGCGCAACGACACCAATGATCAGTCCTTCAACGACTACCTCTCC 19619 ||| | || | ||||| ||||| || || |||||||||||| |||||| || ||| Sbjct 17048 ACTCTGGAAACTATGCTTCGCAATGAGGTTAACGATCAGTCCTTCGGCGACTATCTTTCC 17107 Query 19620 GCCGCCAACATGCTGTACCCCATCCCAGCCAACGCAACCAATGTTCCCATTTCTATTCCT 19679 || |||||||| || | || || | | ||| | || || || |||||||| Sbjct 17108 AGCGTTAACATGCTTTATGCTATTCCTCCGCATCAAACAACAGTGCCTATCTCTATTCCA 17167 Query 19680 TCTCGCAATTGGGCCGCTTTCAGAGGCTGGAGCTTCACCCGTCTTAAAGCCAAGGAAACC 19739 | | |||||||| || || ||||| ||| || || | || ||| ||||||| Sbjct 17168 GCAAGGAATTGGGCGGCCTTTAGAGGTTGGGCATTTACTAGACTAAAACAACAGGAAACA 17227 Query 19740 CCTGCCCTTGGATCTGGCTTTGATCCCTACTTTGTTTACTCAGGCTCCATTCCTTACCTC 19799 || || |||| |||| ||||| || |||||| ||||| ||||| || || || Sbjct 17228 CCAACCATTGGCTCTGCATTTGACCCATACTTTAGGTACTCGGGCTCAATCCCGTATTGG 17287 Query 19800 GACGGCACCTTCTATCTCAACCACACTTTTAAACGGGTGTCTATTATGTTCGATTCCTCG 19859 || | ||||| ||| | |||||| | | | |||| | || ||| ||||| || Sbjct 17288 GATGCGACCTTTTATTTATCTCACACTATCAGAAAGGTGGCCATACAGTTTGATTCTTCA 17347 Query 19860 GTGAGCTGGCCAGGAAACGACCGACTCCTCACCCCTAATGAGTTTGAAGTTAAACGGGTA 19919 || || ||||| ||||| ||| |||| | | |||||||| ||| | | ||| | | Sbjct 17348 GTAAGTTGGCCTGGAAATGACAGACTTTTAATACCTAATGAATTTCACATAAAAAGAGAG 17407 Query 19920 GTGGACGGAGAAGGCTACACTGTTGCGCAGAGCAACATGACCAAAGACTGGTTCCTAATC 19979 ||||||| |||||||| | | ||||||| || || || || |||| | || Sbjct 17408 GTGGACGCGGAAGGCTATAACACCTCTCAGAGCATAATTACTAAGGATTGGTATATGATT 17467 Query 19980 CAGATGCTTAGCCACTACAACATCGGCTATCAAGGCTTCTACATTCCCGAGGGCTACAAA 20039 || ||||| |||||||| ||||| || ||||| || || | ||| | || ||| Sbjct 17468 CAAATGCTCGCTCACTACAATATCGGATACCAAGGTTTTCACCTACCCACAGATTATAAA 17527 Query 20040 GATCGCATGTACTCCTTCTTCCGCAACTTCCAACCCATGACAAGACAGGCCGTGGATCC- 20098 ||| | |||| ||||| || | || || |||||||| ||||| | |||||||| Sbjct 17528 GATAGATTGTATTCCTTTTTAAGAAATTTTGAACCCATGTGTAGACAAGTTGTGGATCCT 17587 Query 20099 CGTAA-ACTACACTAATTATAAGGAAATCACGGTGGCTC------ACCAGCACAACAACT 20151 |||| || | || ||| | | || |||| | ||||| || || | Sbjct 17588 GGTAAGACGGAA--AAATATCA------ACCCGTTGCTCTTAAATATCAGCATAATAATT 17639 Query 20152 CAGGGTTT--GTGGGATTCATGGGCCCCACCATGCGCG--AGGGTCATCCCTACCCAGCA 20207 |||| ||| ||| |||| || | || ||| | || ||||| || || Sbjct 17640 CAGGTTTTAAAAACCATT-ATGGACC---CTTTGGGCGACAAGGCCATCCTTATCCCTGT 17695 Query 20208 AACTACCCCTATCCGCTCATTGGAG-ACAGTGCGGTGCCTACCGTTACCCAGAAAAAGTT 20266 |||| || | |||||||| |||| |||| || | ||| |||| |||| ||| || Sbjct 17696 AACTGGCCTTTCCCGCTCATCGGAGAACAG-GCAGGTAAAACCATTACTCAGAGAAAATT 17754 Query 20267 TTTGTGCGATCGTACCATGTGGCGCATTCCTTTCTCCAGCAACTTTATGTCTATGGGCGC 20326 ||| || || | || ||||| | ||||| |||||| |||||||||||| ||||| | Sbjct 17755 TTTATGTGACAGAACACTGTGGAGGATTCCGTTCTCCTCCAACTTTATGTCCATGGGAAC 17814 Query 20327 TCTTACCGATCTGGGTCAAAATATGCTTTACGCAAATTCCGCCCACGCCCTCGACATGAC 20386 || || |||||||| |||||| |||| || |||||||| || || || | |||||||| Sbjct 17815 ACTAACAGATCTGGGACAAAATTTGCTATATGCAAATTCAGCTCATGCTTTAGACATGAC 17874 Query 20387 CTTTGAAGTGGATCCAATGGACGAACCCACACTACTCTATG-TTCTATTTGAAGTTTTCG 20445 | ||||| ||| ||||||| ||||| || ||| ||| | ||||||||||| || | Sbjct 17875 AGTCGAAGTAGATTCAATGGAGGAACCAACTTATCTC-ATGATGCTATTTGAAGTATTTG 17933 Query 20446 ACGTGGTCCGTGTTCACCAGCCTCACCGGGGCATTATCGAAGCCGTGTATTTGCGTACTC 20505 || || | | || || |||||||| || || | || |||| | ||| | | || | Sbjct 17934 ACATGTGCAGAGTGCATCAGCCTCAACGAGGTGTCATAGAAGTTATTTATCTAAGAACCC 17993 Query 20506 CATTCTCCGCCGGAAACGCCACTACATAAGCAACATGGGGTCCAGCGAAGAAGAACTCAA 20565 | || || || || |||||| | ||||| || |||||| || || || ||| | || Sbjct 17994 CCTTTTCGGCAGGTAACGCCGCAACATA---AATATGGGGACCTCAGAGGACGAAATAAA 18050 Query 20566 AGCCATAATAAGAGATTTACGGTGTGCGCCATATTTTTTGGGAACCTTTGACAAACGTTT 20625 | || || ||||| | || || | ||||||||| |||| ||| ||||| || Sbjct 18051 ACGAATTATCTCCGATTT---GAATGTACCTTGTTTTTTGGGTACCTATGATAAACGCTT 18107 Query 20626 TCCCGGATTTGTGTCGCCGCACAAACT-TGCTTGTGCCATTGTAAATACGGCCGGAAGAG 20684 ||| || ||| | | ||| | ||| |||||||||||||| || | | | Sbjct 18108 TCCGGGGTTTATCCGAAAGGACAGGTTATGC-TGTGCCATTGTAAACACCGGGCTTCGCG 18166 Query 20685 AAACGGGGGGAGTTCACTGGCTGGCTTTTGGATGGAATCCGAAAAACCGAACTTGCTACC 20744 || ||| || || || ||| | || |||| |||||||| | | ||| | ||| Sbjct 18167 AAGAGGGCGGTGTCCATTGGATTGCGTTTGCTTGGAATCCCTATATTAAAACATTTTACA 18226 Query 20745 TGTTTGATCCGTTTGGCTTTTCGGATGAAAAACTAAAACAAATTTATCAATTTGAATACG 20804 |||||||||| || || || |||||| || | | ||| || |||| | || ||||| | Sbjct 18227 TGTTTGATCCATTCGGATTCTCGGATCAAGATTTGAAAAAAGTTTACAACTTCGAATATG 18286 Query 20805 A 20805 | Sbjct 18287 A 18287 Score = 170 bits (188), Expect = 4e-38 Identities = 417/626 (67%), Gaps = 6/626 (1%) Strand=Plus/Plus Query 6106 AAACAGt--ttttttATTGTCCAGTTTGGTAGCGAAGGAGCCGTATAGGGCGTTGGAAAG 6163 ||||||| ||||||||| || | |||| || ||||| ||||| || ||||| || | Sbjct 5585 AAACAGTATTTTTTTATTATCTAACCTGGTGGCAAAGGAACCGTACAGTGCGTTTGACAA 5644 Query 6164 CAGTTTTGCAATGGATCTCAGCGTTTGATTTTTGTCTTTGTCGGCTTTTTCTTTGGCGGC 6223 |||||| || ||| || | | || || | || ||| || || ||||| || || Sbjct 5645 CAGTTTAGCGATGCTTCGCTGTGTGCTGTTGTGGTTTTTTTCCGCGGCCTCTTTTGCCGC 5704 Query 6224 GATGTTGAGCTGC-ACATATTCCCTGGCTACGCATTTCCACTGAGGAAAAACGGTAGTGC 6282 || || || || || ||||| || || ||||| |||||||| ||| || ||| | Sbjct 5705 TATATT-AGTGGCTACGTATTCTCTTGCCACGCAATTCCACTGCTCAAATACTGTAACTC 5763 Query 6283 GTTCATCTGGAATCAACCGCACTTTCCAGCCTCGGTTGTGCAAGGTGACCATGTCGATAC 6342 | |||||||| | ||||| | ||||| ||||| || ||||| || | ||||| Sbjct 5764 GCTCATCTGGGACCAACCTAATCTTCCATCCTCGATTATGCAAAGTAATGGCATCGATGG 5823 Query 6343 TGGTAGCCACTTCCCCTCGCAAACGTTCATTTGTCCAGCAGAGGCGcccccccTTTCGTG 6402 || ||||| |||| ||| ||||||||||||||| || ||||| || |||| | Sbjct 5824 ACGTGCATACTTCGCCTCTTAAATTTTCATTTGTCCAGCAAAGACGCCCGCCTTTTCTCG 5883 Query 6403 AGCAAAAAGGGGGCAGGATGTCTAGCAAGTTTTCGTCgggggggTCCGCGTCTATTGTAA 6462 | ||||| || || | | |||| | | |||| | |||| ||| || || ||| || Sbjct 5884 AACAAAATGGCGGTAAAACATCTAAGTATTCTTCGGCAGGGGCGTCAGCATCAATTACAA 5943 Query 6463 AAATGCCGGGCAAAAGCAAGCGGTCAAAGTAGGATATTTTGGAAGAGCTGTTTAGAGCGT 6522 |||| | || || || ||||||| ||||| |||||| | | | | | ||||| Sbjct 5944 CAATGGCCGGTAACAGGGCAGGGTCAAAATAGGAAATTTTGTCACCGGT-TGCAAAGCGT 6002 Query 6523 CCTG-CCAGTTTTTGGCCGCTAGGGCTCTTTCGAACGGGTTAAGGGGAGGACCCCAAGGC 6581 || | | | | || | | ||| || || || ||||| || || || | ||| Sbjct 6003 TTTGAATACTGATAGAGAGCCAAGTTTCTGTCAAAGGGATTAAGTGGTGGGCCAAAGGGC 6062 Query 6582 ATGGGATGAGTAAGAGCAGATGCGTACATTCCACAGATGTCATACACATACAGGGGTTCG 6641 |||||||| || | || || |||||||| | || ||||| ||||| | ||||| Sbjct 6063 ATGGGATGCGTTAATGCGCTGGCATACATTCCGGAAATATCATAAACATAAATAGGTTCC 6122 Query 6642 GTGAGTACTCCGAGATAGGTGGGATAGCATCTTCCTCCCCGGATGCTGCTTCGCACGTAA 6701 | || || | || ||||| ||||| | ||| || | |||||| || || || Sbjct 6123 TCAAAAACACCTATGTAAGTGGGGTAGCACCGTCCCCCTCTGATGCTTTCTCTTACAAAA 6182 Query 6702 TCGTACAGTTCGTGGGAGGGAGCAAG 6727 || || | ||||| || || || || Sbjct 6183 TCATAAATGTCGTGTGACGGGGCCAG 6208 Score = 150 bits (166), Expect = 4e-32 Identities = 423/644 (66%), Gaps = 4/644 (1%) Strand=Plus/Plus Query 4200 AAAGATGTCTTTCAACAAGAGGGTGATAGCTACTGGAAGGCCTTTAGTGTAAGTGTTAAT 4259 |||||| ||||| || || |||||||| |||| || ||||||||||| ||||| ||||| Sbjct 3675 AAAGATATCTTTTAATAATAGGGTGATTGCTAAGGGTAGGCCTTTAGTATAAGTATTAAT 3734 Query 4260 AAACCGATTAAGTTGGGAGGGGTGCATGCGGGGGGACATGATATGCAGTTTAGACTGGAT 4319 ||| | || || || | ||| ||||| |||| || ||||| ||||| || || Sbjct 3735 AAATCTGTTTAGCTGAGCGGGTTGCATTTTGGGGCTCAGTATATGATATTTAGCTTGAAT 3794 Query 4320 TTTTAGGTTGGATATGTTTCCGCCTAGGTCTCTACGGGGGTTCATGTTGTGCAGTACTAC 4379 |||||| ||||||| ||||| | || ||| | || |||||||| || || | ||| || Sbjct 3795 TTTTAGTGTGGATATATTTCCACTTAAATCTTTTCGCGGGTTCATATTATGTAATACCAC 3854 Query 4380 CAGGACGGTA-TATCCCGTACATTTGGGAAACTTATCGTGAAGCTTAGAAGGGAAAGCGT 4438 | | | || || || | || |||| | || || || || ||||| || |||| Sbjct 3855 AAACA-GATAGTACCCGCTGCACGAGGGATATTTTTCAAATAGTTTTGAAGGAAACGCGT 3913 Query 4439 GGAAAAATTTGGAGATCCCTTTATGACCGCCTAGGTTTTCCATGCATTCATCCATAATAA 4498 | |||||||| | || | | || |||| |||||||| || ||||| || |||| Sbjct 3914 GAAAAAATTTTGCAATAGGGCTGTTCCCTCCTAAATTTTCCATACACTCATCAATGATAA 3973 Query 4499 TAGCTATGGGGCCCTGGACGGCGGCTCGAGCGAAGACGTTTCTGGGATCCGTTACATCAT 4558 | |||||||| || ||| || | | || || | |||| | || ||||| Sbjct 3974 TGGCTATGGGTCCGGTTTTGGCCGCCTGTACAAATTTATTATTTGGATGCCCTAAATCAT 4033 Query 4559 AATTATAGTCTTGGGTGAGCTCGTCATAGGACATTTTATGAAACCGAGGTTTTAAGGTAC 4618 |||| | || | ||| || | || || | || || ||||| |||| |||| Sbjct 4034 AATTTTCTTCGTTTAAGAGATCCTTGTACGATAGTTGCGCGAATCGAGGAGTTAATGTAC 4093 Query 4619 CTGATTGGGGAACTAGGGTGCC-TTCTGGCCCGGCTCTGAAGTTTCCTTCGCAGATTTGC 4677 | | || || || | || |||| ||| | | ||||||| || ||||| Sbjct 4094 CAGTCTGAGGCACAATTTCACCATTCTTTCCCATGT-TATAGTTTCCCTCTATAATTTGT 4152 Query 4678 ATCTCCCAGGCTTTAATTTCTGCAGGGGGAATCATATCTACCTGTGGAGCAATaaaaaaa 4737 | ||| | ||||||| ||||| ||||| ||| | | || | | ||| || Sbjct 4153 GCTTTCCATGACATAATTTCCTGTGGGGGGATCATGTCTGCATAAGGGGTTACAAAGAAT 4212 Query 4738 aCTGTTTCGGGGGCTGGAGAAATTAGCTGGGTGGACAGCAGGTTTCGCAGCAATTGGGAT 4797 | || || ||||| ||| | || | || |||| || |||| || ||||||||| Sbjct 4213 ATAGTCTCCGGGGCGGGATTTAATAATTTGGACGACATAAGATTTCTCAATAATTGGGAT 4272 Query 4798 TTGCCGCTGCCGGTGGGGCCGTAGATTACGGCAATAACCGGCTG 4841 || || || || || || || || || || |||| ||||| || Sbjct 4273 TTTCCACTACCAGTTGGACCATATATGACCCCAATCACCGGTTG 4316 Score = 149 bits (164), Expect = 1e-31 Identities = 243/350 (69%), Gaps = 0/350 (0%) Strand=Plus/Plus Query 17718 AAGATGGCCACCCCATCGATGATGCCGCAGTGGTCGTACATGCACATTGCCGGGCAGGAT 17777 ||||||||||| || |||||| | ||||| ||||| ||| | || || || || || ||| Sbjct 15311 AAGATGGCCACTCCCTCGATGCTCCCGCAATGGTCTTACTTACATATCGCAGGACAAGAT 15370 Query 17778 GCCTCGGAGTACCTCAGTCCCGGCTTGGTTCAGTTTGCTCGAGCCACCGATACCTACTTC 17837 || || || || | ||| | ||| ||| ||||| | || ||||| || ||||| Sbjct 15371 GCTTCAGAATATTTATCTCCTGCGTTGTGTCAATTTGCAAGCGCAACCGAAACGTACTTT 15430 Query 17838 ACACTGGGAAACAAGTTTAGAAATCCCACCGTGGCCCCCACCCACGACGTCACTACTGAT 17897 | || | | || ||||||||||| || || || || || ||||| || ||||| || Sbjct 15431 TCCCTAAGCGATAAATTTAGAAATCCGACGGTTGCGCCGACACACGATGTAACTACGGAA 15490 Query 17898 CGGTCCCAGCGTCTTACTTTGCGATTTGTGCCGGTAGACAGGGAAGACACTGCCTATGCT 17957 | || ||| | || || ||||||| || | || | ||||| || ||| || Sbjct 15491 AGATCGCAGAGACTACAATTAAGATTTGTTCCAGCGGAAAAAGAAGATACACAGTATACT 15550 Query 17958 TACAAAGCCCGATTCACCCTGTCCGTGGGTGATAACAGAGTGCTGGACATGGCCAGTACC 18017 | ||||||||||| || |||| |||||||||||| | | || ||| |||| Sbjct 15551 TTTAAAGCCCGATTTCAACTCACCGTCGGTGATAACAGAATATTAGATTTGGGTAGTAGT 15610 Query 18018 TACTTTGATATACGGGGAGTAATAGACCGAGGTCCCAGTTTCAAGCCGTA 18067 || ||||||||| |||| |||||| |||||||| ||| || || || Sbjct 15611 TATTTTGATATAAAGGGAAAGATAGACAGAGGTCCCTCTTTTAAACCTTA 15660 Score = 120 bits (132), Expect = 6e-23 Identities = 134/178 (75%), Gaps = 1/178 (1%) Strand=Plus/Plus Query 25277 ATTTTTCCTACTCTGTATGCCATTTTCCAGCAAAGCCGCGGACAAGAACCAGAGCTTAAA 25336 || ||||| ||| ||||||| || || || ||| ||||||| || || | | |||| Sbjct 22161 ATATTTCCAACTTTGTATGCTATCTTTCAACAATGCCGCGGTAAAAAATGTCAACCTAAA 22220 Query 25337 ATAAAAAACCGCTCTCTCCGTTCACTTACCCGCAGTTGTCTATATCACAAAAACGAAGAA 25396 || ||||| ||| || | | ||||||||| || ||||| |||||||||||||||||| Sbjct 22221 ATTAAAAATCGCACTTTAAGATCACTTACCAAGAGCTGTCTTTATCACAAAAACGAAGAA 22280 Query 25397 CAGTTGCAACGCACGTTGGACGACGCAGAAGCTCTGTTCAACAAGTACTGCGCAGCAA 25454 ||| |||| | || |||| |||||||| || || | ||||||| ||| | ||||| Sbjct 22281 CAGCTGCAGAGGACTCTGGAAGACGCAGAGGCGCTACTGAACAAGTGCTGTG-AGCAA 22337 Score = 109 bits (120), Expect = 1e-19 Identities = 214/315 (68%), Gaps = 6/315 (2%) Strand=Plus/Plus Query 5567 GttttttttGATTCTTTTCCTACCTTTTGTTTCCATGAGTTGGTGTCCCAAATCTGTCAC 5626 ||||| ||| | ||| | | ||||||| || ||||| ||| || || |||||||| Sbjct 5039 GTTTTCTTTAAGTCTATGCTTACCTTTGGTCTCCATCAGTCTATGCCCTGTTTCTGTCAC 5098 Query 5627 GAAAAGGCTGTCAGTGTCTCCGTACACGGATTTCAGGGGTC---GCTCAGAGAGAGGTGT 5683 ||| | |||||||| |||||||| | ||||| | || | || | |||| Sbjct 5099 GAACAAACTGTCAGTATCTCCGTAAATCGATTTTAAAATTCTGCGGTCCCA---AGGTCG 5155 Query 5684 GCCGCGATCCTCTTCGTAGAGAAACTCTGACCATTCTGAGACGAAAGCACGAGTCCAAGC 5743 || | ||| || || | ||| || | |||||| || |||||| || ||||| || Sbjct 5156 TCCCCAATCTTCAGAATATAAAAATTCCGCCCATTCGGAAGTGAAAGCGCGGGTCCAGGC 5215 Query 5744 CAACACAAAGGATGCGATCTGAGAAGGATAGCGGTCGTTGTCAATTAGGGGGTCGGTATT 5803 | ||||| || ||||| || || || ||||||| || || ||| | ||| ||||| Sbjct 5216 GAGAACAAATGACGCGATTTGGGATGGGTAGCGGTTATTATCTATTTGTGGGGAAGTATT 5275 Query 5804 TTCCAACGTGTGAAGACACAGGTCTGTTTCTTCCGCATCCaaaaaaaTGATTGGTTTGTA 5863 ||| | | | ||||| || |||| | || || | | ||| ||| ||||||| || | Sbjct 5276 TTCTATCATTTGAAGGCATAGGTGAGAATCGTCAGATTGCAAGAAAGTGATTGGCTTAAA 5335 Query 5864 AGTGTATGTCACGTG 5878 | ||||||||||| Sbjct 5336 CTTATATGTCACGTG 5350 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 105201693234066