Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dipodomys_20ordii_20[refseq_20GCF_5F000151885.1_202014-12-12] 65,193 sequences; 2,236,368,823 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq20 82.4 8e-11 >seq20 Length=25211774 Score = 82.4 bits (90), Expect = 8e-11 Identities = 92/123 (75%), Gaps = 0/123 (0%) Strand=Plus/Minus Query 59989 TAGCTTTTGCATGCGTGGAAGGAATCTTCTTCTCTGGCTCGTTCTGTGCTATTTTCTGGC 60048 |||| ||||| ||||| ||||||||||| ||||| || ||| | || ||||||| Sbjct 21308603 TAGCCTTTGCCGCGGTGGAGGGAATCTTCTTTTCTGGTTCTTTCGCGTCGATATTCTGGC 21308544 Query 60049 TCAAAAAGCGTGGCCTCATGCCGGGCCTGAGTTTCTCCAACGAGCTGATTTCCCGGGACG 60108 | || ||||| || || ||||| ||||| | || ||||| ||||| ||| | | |||| Sbjct 21308543 TGAAGAAGCGAGGACTTATGCCTGGCCTCACGTTTTCCAATGAGCTTATTAGCAGAGACG 21308484 Query 60109 AGG 60111 ||| Sbjct 21308483 AGG 21308481 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548077800283920