Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dipodomys_20ordii_20[refseq_20GCF_5F000151885.1_202014-12-12] 65,193 sequences; 2,236,368,823 total letters Query= NC_030874.1 Length=29162 Score E Sequences producing significant alignments: (Bits) Value seq4931 753 0.0 >seq4931 Length=27746 Score = 753 bits (834), Expect = 0.0 Identities = 1387/2020 (69%), Gaps = 36/2020 (2%) Strand=Plus/Plus Query 16568 CCCAGATAGTGCTCTAGTATTG-GAAACTGTAAATATGCAAACACCAGATACACATTTAA 16626 ||||||| ||||||| ||| ||| | | |||| ||| | |||||||| || ||| Sbjct 16027 CCCAGATTGTGCTCTT-TATGCAGAAGATTTGGATATACAAGCTCCAGATACTCACTTAG 16085 Query 16627 TTTACAAA--AT-TAATGAAGATGAGGAA-ACTCACCTCCCCAGTCTAGGGCAACAAAGT 16682 | |||||| || | | |||| || |||| | | ||| || || ||||| Sbjct 16086 TGTACAAAGCATCTCCCGGGCATGAAAAAGACTCTCTTGCCCTCGCT----CAGCAAAGC 16141 Query 16683 GCTCCAAATAGGCCAAATTATATTGCTTTTAGAGATAATTTTATAGGTTTGATGTATTAT 16742 || ||||| |||||||||||||| | |||||| ||||| ||||| || || |||| |||| Sbjct 16142 GCGCCAAACAGGCCAAATTATATAGGTTTTAGGGATAACTTTATCGGGTTAATGTTTTAT 16201 Query 16743 AATAGTAATGGTAACTTGGGAGTTTTAGCTGGTCAATCTTCTCAACTAAATGCTGTAGTT 16802 || |||||| | || ||||| || ||||| |||||||| || || || |||||||| | Sbjct 16202 AACAGTAATAGCAATTTGGGTGTATTAGCCGGTCAATCGTCACAGCTTAATGCTGTCATC 16261 Query 16803 GATTTGCAAGATAGAAATACAGAACTTTCATATCAATTAATGTTGGCAAATACTACA-GA 16861 || | ||||| |||||||||||| | |||||||| | ||||| | ||| |||| || Sbjct 16262 GACCTTCAAGACAGAAATACAGAATTGTCATATCAGCTTATGTTAGATAATT-TACACGA 16320 Query 16862 TAGATCTAGATATTTTAGTCTATGGAATCAAGCAGTAGATGATTATGATCCAGATGTTAG 16921 |||| || |||||| || | ||||||||||| || ||| ||||||||||| || | Sbjct 16321 TAGAACTCGATATTACAGCTTGTGGAATCAAGCCGTGGATTCATATGATCCAGAGGTCCG 16380 Query 16922 AGTTATTTCTAATCATGGAGTGGAAGATGAAATGCCTAACTATTGTTTTCCACTAGCTGG 16981 | | || ||| |||||| ||||| ||| | || || ||||| ||||| || |||| Sbjct 16381 AATCATAGACAATATTGGAGTAGAAGACGAACTTCCAAATTATTGCTTTCCGTTATCTGG 16440 Query 16982 TATGGATTTCAATGTAGC-TACTGCAGTAAAAAATGATGGTAGTGCTGAAAAAACAAATA 17040 ||| | | || | |||||| || || | |||| | || ||| | Sbjct 16441 -ATGTTCTCCTATTGATTATACTGCTGTTAATCAAAATGG---------ACAAGCAATCA 16490 Query 17041 ATCAAGATAT---TGGAACTGTAAATGTAGGGTTGGGAAATGTAAGTTGTATGGAAATTA 17097 || | ||| || || | |||| |||||||| || |||||||| | Sbjct 16491 ATAACAATAACCCTGCGCAGGTTCTTATAGGCAAAGGAAATGTTGAATGCATGGAAATCA 16550 Query 17098 ATTTGGCAGCAAATTTGTGGAGAGGATTTT-TGTATTCTAATATAGCTTTGTATGCACCA 17156 | | || || || |||||| || ||||| ||||||||||||| || ||||| || Sbjct 16551 ACATAGCGGCCAACCTGTGGA-AGAATTTTCTGTATTCTAATATCGCGCTGTATCTGCCC 16609 Query 17157 GATGAATATAAACAAACTCCACCTAATATTGAATTGNNNNNNNNNNNNNNNNNNTATGCT 17216 ||| | | |||| ||||| | ||| | | |||| |||||| Sbjct 16610 GATAACTTTAAAACCACTCCCGCAAATGTGGTATTGCCGCAGGATCAGCGGCTATATGCT 16669 Query 17217 TATATGAATGGAAGAATTCCTATCACAAATCTTATTGATAGCTATGTTAATATTGGTTCA 17276 || |||||| | ||||| | ||| | || ||| | || || || | Sbjct 16670 TACATGAATTCTCGCATTCCAGCCGGGGGTCTGGTAGAGGATTATATCAACATAGGAACC 16729 Query 17277 AAATGGTCTCCAGATATTATGGATAATGTAAATCCATTTAATCATCACAGAAATCCTGGT 17336 | ||||| |||| | ||||| | || |||||||||||||||||||||||| ||||| Sbjct 16730 AGGTGGTCAATAGATGTGATGGACACGGTTAATCCATTTAATCATCACAGAAATACTGGT 16789 Query 17337 TTAAGATACAGATCCCAACTTTTAGGAAATGGAAGAATTTGTGAATTTCATATTCAAGTT 17396 || || ||||| || || || ||||||||||| | | | ||||||||||| ||| Sbjct 16790 TTGAGGTACAGGTCTCAGCTATTAGGAAATGGTCGCTATGCTTCCTTTCATATTCAGGTT 16849 Query 17397 CCTCAAAAATTTTTTGCTATAAAAAATTTACTTCTTTTGCCTGGTACTTATACTTATGAA 17456 || ||||| |||||||| | |||| ||| ||||| | || || | || | ||| ||| Sbjct 16850 CCGCAAAAGTTTTTTGCACTTAAAAGTTTGCTTCTGCTACCGGGATCGTACAGTTACGAA 16909 Query 17457 TGGGCCTTTCGAAAAGATGTTAATATGATTTTGCAAAGTACATTAGGAAATGATTTAAGA 17516 ||| | ||| |||||||||| || ||||||||||| ||||| | || |||||| | || Sbjct 16910 TGGTCTTTTAGAAAAGATGTAAACATGATTTTGCAGAGTACTCTTGGCAATGATCTGAGG 16969 Query 17517 GCAGATGGGGCAACTATAACCATCAATAGTGTAAATTTGTATGCAAGTTTTTTCCCAATG 17576 | || || || | |||| | | || | | | | ||| | ||| || || ||| Sbjct 16970 GAGGACGGAGCGTCAGTAACATTTGACAGCATTAGCCTATTTGCTACTTTCTTTCCGATG 17029 Query 17577 TCCCATAATACTGCTTCTACTTTAGAAGCAATGTTAAGAAATGAAACAAATGATCAAACA 17636 || ||||| |||||||||||| | ||| | ||| | | ||||| || ||||| | Sbjct 17030 TCTCATAACACTGCTTCTACTCTGGAAACTATGCTTCGCAATGAGGTTAACGATCAGTCC 17089 Query 17637 TTTAATGATTATTTGTCTTCTGCTAATATGCTTTATCCCATTCCTCCTAAGGCTACTCAA 17696 || || ||| | || | ||| ||||||||| | |||||||| | || | Sbjct 17090 TTCGGCGACTATCTTTCCAGCGTTAACATGCTTTATGCTATTCCTCCGCATCAAACAACA 17149 Query 17697 CTTCCTATTTCAATTCCATCTAGAAATTGGGCTGCTTTTAGAGGATGGAGTTTTACTAGA 17756 | ||||| || |||||| | || |||||||| || |||||||| ||| ||||||||| Sbjct 17150 GTGCCTATCTCTATTCCAGCAAGGAATTGGGCGGCCTTTAGAGGTTGGGCATTTACTAGA 17209 Query 17757 ATAAAACAAAAAGAAACTCCAGCCTTAGGTTCTCCATTTGATCCTTATTTCACTTATTCT 17816 |||||||| | ||||| ||| || | || ||| ||||||| || || || | || || Sbjct 17210 CTAAAACAACAGGAAACACCAACCATTGGCTCTGCATTTGACCCATACTTTAGGTACTCG 17269 Query 17817 GGAAGTATTCCCTATTTAGATGGAACATTTTATTTGAACCATACCTTTAGAAGAGTTGCA 17876 || || || |||| |||| || |||||||| || || | |||| || || Sbjct 17270 GGCTCAATCCCGTATTGGGATGCGACCTTTTATTTATCTCACACTATCAGAAAGGTGGCC 17329 Query 17877 ATTCAATTTGATTCTTCTGTAAGTTGGCCAGGAAATGATAGACTTTTGACACCTAATGAA 17936 || || ||||||||||| ||||||||||| |||||||| |||||||| | |||||||||| Sbjct 17330 ATACAGTTTGATTCTTCAGTAAGTTGGCCTGGAAATGACAGACTTTTAATACCTAATGAA 17389 Query 17937 TTTGAAATTAAAAGAACAGTTGATGGAGAAGGTTATACCACTGCTCAAAGCACTATTACT 17996 ||| | || |||||| || || | ||||| |||| ||| |||| |||| |||||| Sbjct 17390 TTTCACATAAAAAGAGAGGTGGACGCGGAAGGCTATAACACCTCTCAGAGCATAATTACT 17449 Query 17997 AAAGACTGGTTTTTAGTGCAAATGTTGGCTAATTATAATATTGGTTATCAAGGTTATTAT 18056 || || |||| | | | |||||| | ||| | || ||||| || || ||||||| | | Sbjct 17450 AAGGATTGGTATATGATTCAAATGCTCGCTCACTACAATATCGGATACCAAGGTTTTCAC 17509 Query 18057 TTACCTGATGAATACAAAGAAAAAAGTTATTCCTTTTTGAAAAATTTTACTCCTATGTGT 18116 |||| || || ||||| | | ||||||||||| | ||||||| || |||||| Sbjct 17510 CTACCCACAGATTATAAAGATAGATTGTATTCCTTTTTAAGAAATTTTGAACCCATGTGT 17569 Query 18117 AGACAAGTAGTAGATACCAATTATA---GAAATTAT-AAAGGGGTAATTTTAAGTCACCA 18172 |||||||| || ||| | | | | ||| ||| || | | | |||| | | || Sbjct 17570 AGACAAGTTGTGGATCCTGGTAAGACGGAAAAATATCAACCCGTTGCTCTTAAAT-ATCA 17628 Query 18173 ACATAATAATTCTGGTTTTGTTGGTGCAGTAGCTGCTACTGCTCCTAGAGAGGGACATCC 18232 ||||||||||| |||||| || || || | | || | || ||||| Sbjct 17629 GCATAATAATTCAGGTTTT-AAAAACCATTA--TGGACCCTTTGGGCGACAAGGCCATCC 17685 Query 18233 ATATCCTGCAAATTGGCCTTATCCATTGATAGGCCCAAATGCAGTTCCAATGAAAACAGA 18292 ||||| || ||||||| || | || || | | |||| | || | || | Sbjct 17686 TTATCCCTGTAACTGGCCTTTCCCGCTCATCGGAGAACAGGCAGGTAAAACCATTACTCA 17745 Query 18293 GAAAAAATTTCTTTGTGATAAAACTTTGTGGAGAATACCATTTTCTTCCAATTTTATGAA 18352 || ||||||| | ||||| | ||| ||||||| || || || || ||||| |||||| Sbjct 17746 GAGAAAATTTTTATGTGACAGAACACTGTGGAGGATTCCGTTCTCCTCCAACTTTATGTC 17805 Query 18353 TATGGGAACACTAACAGATTTAGGTCAAAATTTACTTTATTCTAATGCAGCACATGCTTT 18412 |||||||||||||||||| | || |||||||| || ||| | ||| |||| |||||||| Sbjct 17806 CATGGGAACACTAACAGATCTGGGACAAAATTTGCTATATGCAAATTCAGCTCATGCTTT 17865 Query 18413 AGATATGACTTTTGAACTTGATCCTATGGACGAAACTACTTATTTATATATTTTGTTTGA 18472 ||| ||||| | ||| | ||| | ||||| ||| | |||||| | || | ||||| Sbjct 17866 AGACATGACAGTCGAAGTAGATTCAATGGAGGAACCAACTTATCTCATGATGCTATTTGA 17925 Query 18473 AGTTTTTGATGTATGTCGCATCCATCAACCCCATAGAGGTGTAATTGAAGCAGTGTACCT 18532 ||| ||||| | || | | ||||| || || ||||||| || |||| | || || Sbjct 17926 AGTATTTGACATGTGCAGAGTGCATCAGCCTCAACGAGGTGTCATAGAAGTTATTTATCT 17985 Query 18533 GAGAACTCCGTTTTCTGCAGGAAACGCTACAACTTAAGTA 18572 ||||| || ||||| ||||| ||||| |||| ||| || Sbjct 17986 AAGAACCCCCTTTTCGGCAGGTAACGCCGCAACATAAATA 18025 Score = 356 bits (394), Expect = 4e-94 Identities = 877/1313 (67%), Gaps = 34/1313 (3%) Strand=Plus/Plus Query 12089 CGCTCCGTCTGAGGGAAGAAATAGTATTCTTTATTCACAACTTCCTCCAGTTTATGATAC 12148 ||| ||| |||||||||||||||| || ||||||||| | ||| | | | ||||| Sbjct 12036 CGCGCCGACTGAGGGAAGAAATAGCATAGTTTATTCACCTTTACCTACGTTACACGATAC 12095 Query 12149 CACTAATTTATATTTAATTGATAACAAATCTGCTGATATTGAATCTCTTAATTATCAAAA 12208 || || | || || || ||||||||| | | || || || || |||||||| || Sbjct 12096 AACGAAAATTTACTTTATCGATAACAAAGCATCCGACATCTCTTCCCTAAATTATCAGAA 12155 Query 12209 TGATAGAAGTAACTATCTTACTAGTGTTATTCAAAATAGTGATTTTAGTCCTATGGAAGC 12268 ||| ||| ||| | || || ||||||||| ||||||| ||| |||||| Sbjct 12156 CGATCATAGTTTATATTTAACATCCGTCATTCAAAATCCGGATTTTAATCCCCTGGAAGG 12215 Query 12269 AAGTACACAAACCATTAAATTAGATGAAAGATCACGATGGGGAGGACAATTTAAAACTAT 12328 | ||| || ||||||||||||||||| ||||||| || | || ||||| || Sbjct 12216 CACGGGACATCAGATAAAATTAGATGAAAGATCTAGATGGGGTGGTAATTTAAAAACCAT 12275 Query 12329 TTTACATATGGCTATTCCAAATATTAATGAATTTATGTATACTAATAATTTTAGAGTAAA 12388 | | ||| || |||||||| | || | |||| || |||| ||||||||| || Sbjct 12276 TCTGCATTCAAACATACCAAATATAACCGAGTACATGTTTAGTAATTCTTTTAGAGTTAA 12335 Query 12389 AGTTATGGCTGATAAA----ACCAATATTAATAGACCTATTTATAAATGGTTTGATTTAA 12444 | || | ||| || ||| | ||| ||| ||||| | | ||| Sbjct 12336 GATACCCACTCAAAAAGTTGACGGGCATTTA-AGA------TATGAATGGGTGACTCTAA 12388 Query 12445 CTATACCAGAGGGTAATTTTTCCTTAATAATGGTTTTAGAACTTATGAATAATGCAATAG 12504 | ||||| || || |||||||| || |||||| |||| | ||||| |||| || Sbjct 12389 CCATACCCGAAGGAAATTTTTCGGAGATTATGGTTATAGATTTGATGAACGATGCCATTA 12448 Query 12505 TTGAAAATTATATGAAAGTAGGTAGACAATATGGAGTTAAAGAGGAGGATATAGGTATTA 12564 | ||||| || || || | || ||||| || || || |||||| ||| Sbjct 12449 TCTCTCATTATTTGTCTAATGGCAGGTTACGCGGTGTTAATGAAGATGAAATAGGTGTTA 12508 Query 12565 AATTTGACACTAGAAATTTTAAACTTGGATGGGATCCTGAAAAAAGATTAGTTGCTCCAG 12624 | | |||||||||||||||||| | || | ||||| | | | ||| | || | Sbjct 12509 AGCTGGACACTAGAAATTTTAAAATGGGTTATGATCCCTATTATAAGTTAATCATGCCCG 12568 Query 12625 G--TGTATATACTTATGAAGCTTTTCATCCAGATATTGTTTTACTACCAAATTGTGCTGT 12682 | ||||| || |||||||| |||||||| || | | ||| ||| | |||||| | Sbjct 12569 GCATGTATCTA--TATGAAGCATTTCATCCCGACGTGATCTTAAGTCCACACTGTGCTAT 12626 Query 12683 AGATTTTACTAACAGTCGTTTAAGTAACTTATTAGGGATTAGAAAAAGATTTCCATTTCA 12742 ||||||| || ||| | |||| ||| |||| || || ||||||||||| |||| ||| Sbjct 12627 TGATTTTAGCAAAAGTAGATTAAATAATCTATTGGGTATAAGAAAAAGATTACCATATCA 12686 Query 12743 AAAAGGTTTTATAATTACTTATGAAGATTTAAGAGGAGGTAATATTCCAGCTTTAAGAGA 12802 || | |||||| || |||||||| |||||| ||| || |||||||| ||| || ||| Sbjct 12687 GAAGGATTTTATTATCACTTATGATGATTTAGTAGGGGGAAATATTCCCGCTCTATTAGA 12746 Query 12803 TGTAGAAAATGATGGGCGAGGAGATATGCAAGGCT---GGACTGCTTTaaaaaaagataa 12859 ||| || || || | ||| || || | || |||| || || Sbjct 12747 CTTAG--AAGCATTTGC-TCAAAATA-ACATGGTTCACAAACCCCTTT--TGAAGGACCC 12800 Query 12860 aaaaGGCAGAAGTTATCATGTAGGTGAAGATCCAGAAGCAGATATAAATGATACAGCTTA 12919 | | |||| |||||||| |||| ||||| |||||||| ||| || ||| Sbjct 12801 CCATGACAGAGACTATCATGTCGGTGGTGATCCCAAAGCAGATGCGTTTGACACGTATTA 12860 Query 12920 TAGGAGTTGGTATTTAGCTTATAATTATGGAGATCCAGAGGGAGTTAAAAGTTGGACTTT 12979 || |||||||||||||| |||||||| || |||||| || |||||| | || | Sbjct 12861 CAGAAGTTGGTATTTAGCATATAATTACGGTCCTCCAGATGGGGTTAAATCTAAAACACT 12920 Query 12980 ATTGGTTACACCTGATATTACTTGTGGTGCTGAACAAATTTATTGGAGTCTTCCTAATCT 13039 || || || ||| | || |||||| | |||||||| || ||||| ||||| || | Sbjct 12921 TTTAACAACCCCAGATGTCACATGTGGTCCCGAACAAATATACTGGAGCCTTCCAGATAT 12980 Query 13040 AG--CAACTGCACCAGTAAGTTTTAGAGAT-TCTCATAGTT-CATCAAATTATCCTGTAA 13095 || ||| | ||| ||| |||| | | || |||| | ||||| ||||| Sbjct 12981 AGTTCAA--GAACCTGTATCCTTTAAACCTACCTTTAAGTTGGAACAAAT--GCCTGTTG 13036 Query 13096 TTGGAACTGAATTAATGCCACTTCATG-CAAGAAGTTATTATAATCCTCAAGCTGTCTAT 13154 | ||| ||||| |||| || | | || | ||| || ||| | || ||||| ||| Sbjct 13037 TGGGAGTAGAATTGTTGCCGCTAAAAGCCAGGGCGTTCTT-TAACGCCCAGGCTGTGTAT 13095 Query 13155 TCTCAATTAGTAAGAGAAAGAACAGCTCAAACTCATGTATTTAATAGATTTCCAAATAAT 13214 || || | || || ||| | ||||| ||||| || ||||||||||| ||||| Sbjct 13096 TCGCAGATGTTAGCGGATTCAACTTCGCAAACACATGTCTTCAATAGATTTCCTGATAAT 13155 Query 13215 CAGATTCTTATTCGACCACCAGCACCTACTATAACCACCATTACTGAAAACGTGCCAGCG 13274 || || | || || |||||||| || || || | |||| | |||||||||||| | Sbjct 13156 CAAATCTTAATCCGTCCACCAGCTCCCACAATTTGCTCCATCAGCGAAAACGTGCCATCT 13215 Query 13275 ATAACAGATCATGGAACCATACCATTAAAGAACAGCATTTCTGGTGTTCAACGAGTAACT 13334 | || ||||| ||||| || | |||||||| |||||| |||| | || || |||| | Sbjct 13216 TTGACGGATCACGGAACAATTTCTTTAAAGAATAGCATTACTGGGATACAGCGTGTAATT 13275 Query 13335 TTAACCGATGCTAGAAGAAGACTTTGCCCATACGTAACCAAAAGTGTTGGCAT 13387 ||||| || || ||||||||| ||||||||| |||||| | || || Sbjct 13276 TTAACAGACGCCAGAAGAAGAACGGTTCCATACGTATATAAAAGTTTAGGAAT 13328 Score = 262 bits (290), Expect = 7e-66 Identities = 563/826 (68%), Gaps = 18/826 (2%) Strand=Plus/Plus Query 3282 GTGAATTTTTACAAGTATATTATATAACTTACATTGCACATTTAAATACATAGGCAT-AA 3340 ||| ||||||| | || | ||||| ||| || ||||||||||||||||| | || Sbjct 3516 GTGTATTTTTAGTAAAATTTCATATAGTTTAGTCTGAACATTTAAATACATAGGGGTCAA 3575 Query 3341 CTCCTTCTGTGGGATTTAAATACATCCATTGTAAAGCAT--CATGTTCAGGAACAGTGTT 3398 || || | | | | ||||||||||||| | | || || ||| ||| | Sbjct 3576 TTCACATTGCGCGCTC-ATATACATCCATTGTTGACTTTGACACGT--AGGGGTGGTGGT 3632 Query 3399 ATATATTATCCAATCATATTTGGAATGTAAATTATGATAATTAAAAATATCTTTTAAAAG 3458 || | ||||||||||| || ||||| ||| || ||| ||||||||||| | Sbjct 3633 GTACACGATCCAATCATAAGATGAGTGTAAGGAATGGTAGGCAAAGATATCTTTTAATAA 3692 Query 3459 AAGTGTAATTGCCAAAGGTAAATTTTTAGTATATGTATTTATAAATCTATTTAGTTGCAT 3518 || || ||||| || |||| ||||||||| ||||| |||||||| ||||| || Sbjct 3693 TAGGGTGATTGCTAAGGGTAGGCCTTTAGTATAAGTATTAATAAATCTGTTTAGCTGAGC 3752 Query 3519 AGGTTGCATTTTTGGACTTAATATATGCATTTTTGCTTGAATTTTTAAAGTAGCAATATT 3578 ||||||||||| || || | |||||| ||| ||||||||||||| || | ||||| Sbjct 3753 GGGTTGCATTTTGGGGCTCAGTATATGATATTTAGCTTGAATTTTTAGTGTGGATATATT 3812 Query 3579 TCCACAATTATCTTTTCTAGGATTCATATTATGTAAAACTACTAAAACAG-TA-TAACCA 3636 ||||| |||||||| || |||||||||||||| || || |||||| || || || Sbjct 3813 TCCACTTAAATCTTTTCGCGGGTTCATATTATGTAATACCAC--AAACAGATAGTACCCG 3870 Query 3637 GTACATTTTGGAAATTTATCATGTAATTTTGAGGGAAAAGCATGAAAAAATTTAGCTATT 3696 | || ||| |||| ||| || |||||| ||||| || ||||||||||| || || Sbjct 3871 CTGCACGAGGGATATTTTTCAAATAGTTTTGAAGGAAACGCGTGAAAAAATTTTGCAATA 3930 Query 3697 CCTTTAGTTGAGCCTAAATTTTCCATACATTCATCCATAATTATAGCTATTGGACCTTCT 3756 | | ||||||||||||||||| ||||| || || || ||||| || || | Sbjct 3931 GGGCTGTTCCCTCCTAAATTTTCCATACACTCATCAATGATAATGGCTATGGGTCCGGTT 3990 Query 3757 TTTGCTGCTTGAGCAAACACATTATTAGGGT-CACTAATATCATAATTATGATC-TTGAA 3814 || || || || |||| |||||| || | | |||| ||||||||| | || || || Sbjct 3991 TTGGCCGCCTGTACAAATTTATTATTTGGATGCCCTAA-ATCATAATTTTCTTCGTTTAA 4049 Query 3815 TAAATTCATCATAAGACATTTTAATAAATTTTGGCATTAAAGTAGAACTTTGAGGTATAA 3874 | | || | || || | || ||| || |||| ||| | | ||||| | || Sbjct 4050 GAGA-TCCTTGTACGATAGTTGCGCGAATCGAGGAGTTAATGTACCAGTCTGAGGCACAA 4108 Query 3875 CTATTCCATCAGGTCCAGCTAAATAATTTCCTTCACATATTTGACTTTCCCATGCTGAAA 3934 | |||| ||| ||| ||||| || ||||| || ||||| || Sbjct 4109 TTTCACCATTCTTTCCCATGTTATAGTTTCCCTCTATAATTTGTGCTTTCCATGACATAA 4168 Query 3935 ATTCATGAGGGGGTATCATGTC--AATTTGGGGCACAATAAAAAATATTGTTTCTGGTTG 3992 ||| || ||||| |||||||| || |||| | ||| ||||| || || || Sbjct 4169 TTTCCTGTGGGGGGATCATGTCTGCATAAGGGG--TTACAAAGAATATAGTCTCCGGGGC 4226 Query 3993 TGGATGAATTAATTGAGAAGATAGTAAATTTCGAAGTAACTGGGATTTTCCACTACCAGT 4052 |||| | ||||| || || | | ||||| | ||| |||||||||||||||||||| Sbjct 4227 GGGATTTAATAATTTGGACGACATAAGATTTCTCAATAATTGGGATTTTCCACTACCAGT 4286 Query 4053 AGGACCATAAATAACCCCTATAAATGGTTGCATATTATAATTTAAA 4098 |||||||| || ||||| || | ||||| ||| | ||||||| Sbjct 4287 TGGACCATATATGACCCCAATCACCGGTTGAGTATCACCATTTAAA 4332 Score = 239 bits (264), Expect = 8e-59 Identities = 286/386 (74%), Gaps = 2/386 (1%) Strand=Plus/Plus Query 15824 GAAGATGGCCACTCCTTCGATGATGCCCCAGTGGGCCTACATGCACATCGCCGGTCAGGA 15883 ||||||||||||||| |||||| | || || ||| | ||| | || ||||| || || || Sbjct 15310 GAAGATGGCCACTCCCTCGATGCTCCCGCAATGGTCTTACTTACATATCGCAGGACAAGA 15369 Query 15884 CGCTTCTGAATACCTTTCACCTGGCCTAGT-ACAGTTTGCACAAGCAACAGAAAGTTATT 15942 ||||| ||||| | || ||| || | || || |||||| ||||| |||| || | Sbjct 15370 TGCTTCAGAATATTTATCTCCT-GCGTTGTGTCAATTTGCAAGCGCAACCGAAACGTACT 15428 Query 15943 TTAATCTTGGCAGCAAATTTAGAAATCCCATGGTGGCTCCTACCCATGATGTAACCACAG 16002 || || || |||||||||||||| | ||| || || || || |||||||| || | Sbjct 15429 TTTCCCTAAGCGATAAATTTAGAAATCCGACGGTTGCGCCGACACACGATGTAACTACGG 15488 Query 16003 AAAGATCTCAGAGACTCCAACTCAGATTTGTACCAGTGGACAAGGAAGATACTCAATATG 16062 ||||||| |||||||| ||| | |||||||| |||| ||| || |||||||| || ||| Sbjct 15489 AAAGATCGCAGAGACTACAATTAAGATTTGTTCCAGCGGAAAAAGAAGATACACAGTATA 15548 Query 16063 CTTATAAAACTCGATTTCAATTGGCTGTAGGTGATAATCGAGTTTTAGACATGGCAAGTT 16122 ||| |||| | ||||||||| | | || |||||||| || | ||||| ||| ||| Sbjct 15549 CTTTTAAAGCCCGATTTCAACTCACCGTCGGTGATAACAGAATATTAGATTTGGGTAGTA 15608 Query 16123 CTTATTTTGACATTAGAGGTGTATTAGACAGAGGGCCTACATTTAAACCTTATAGTGGAA 16182 ||||||||| || | || |||||||||| || | ||||||||||| ||||| | Sbjct 15609 GTTATTTTGATATAAAGGGAAAGATAGACAGAGGTCCCTCTTTTAAACCTTACAGTGGCA 15668 Query 16183 CGGCCTATAATACTCTAGCCCCTAAA 16208 | || || |||| || ||||| ||| Sbjct 15669 CAGCATACAATAACCTTGCCCCGAAA 15694 Score = 224 bits (248), Expect = 2e-54 Identities = 902/1395 (65%), Gaps = 55/1395 (4%) Strand=Plus/Plus Query 5325 ATTTGATCAGAAAAAACTGtttttttATTATCTAATTTGGTAGCAAATGAGCCATATAAG 5384 |||||||| | ||| | | |||||||||||||||| |||| ||||| || || || | Sbjct 5574 ATTTGATCCGGAAACAGTATTTTTTTATTATCTAACCTGGTGGCAAAGGAACCGTACAGT 5633 Query 5385 GCATTTGATAATAATTTTGATATATTTCTTAAAGTTTGAtttttt--tCTTTATCTGCTN 5442 || ||||| || | ||| | || ||| || || | || | | ||| || || Sbjct 5634 GCGTTTGACAACAGTTTAGCGATGCTTCGCT--GTGTGCTGTTGTGGTTTTTTTCCGCGG 5691 Query 5443 NNNNNNNNNNNNNNATATTTAGTTT-TACATATTCAGCTGCTATACATTTCCATTCTGGA 5501 ||||| ||| ||| ||||| ||| | || ||||| | | Sbjct 5692 CCTCTTTTGCCGCTATATT-AGTGGCTACGTATTCTCTTGCCACGCAATTCCACTGCTCA 5750 Query 5502 AAAATTGTACTTCTATCATCAGGTAAAATTTCTACCTTCCATCCTCTATTATGTAATGTA 5561 || | |||| || ||||| || | | | ||||||||||| |||||| || ||| Sbjct 5751 AATACTGTAACTCGCTCATCTGGGACCAACCTAATCTTCCATCCTCGATTATGCAAAGTA 5810 Query 5562 ATTATATCAATAGTAGTAGCA-ATTTCACCTTTTAAAGGTTCATTTGTCCAGCATAATCG 5620 || ||| || | || ||| | ||| ||| ||||| ||||||||||||||| | || Sbjct 5811 ATGGCATCGATGGACGT-GCATACTTCGCCTCTTAAATTTTCATTTGTCCAGCAAAGACG 5869 Query 5621 ACCTCCTTTTTTAGAACAAAAAGGAGGAAGTAAATCTAAGAAATGTTCAGGTGGGGGCGT 5680 || |||||| | |||||||| || || | | ||||||| | | ||| || ||||||| Sbjct 5870 CCCGCCTTTTCTCGAACAAAATGGCGGTAAAACATCTAAGTATTCTTC-GGCAGGGGCGT 5928 Query 5681 T-GCATCAATTGTAAGTATTCCAGGAAGTAAATTTTTATCAAAATATGAAATTGTTTTAT 5739 ||||||||| || || | || | | |||||||| |||||| | | | Sbjct 5929 CAGCATCAATTACAACAATGGCCGGTAACAGGGCAGGGTCAAAATAGGAAATTTTGTCAC 5988 Query 5740 ATTTTTGTAAATAGTAAACA-TATTTATTAATTTCAATATTTCTTTCAAATGTATTTAGG 5798 || | ||| || | || | || | | | ||||| ||||| | ||| || Sbjct 5989 CGGTT-GCAAAGCGTTTTGAATACTGATAGAGAGCCAAGTTTCTGTCAAAGGGATTAAGT 6047 Query 5799 GGTTTTCCAGCTGGGAATGGATGTGTTAGTGCACTGGCATACATTCCACATATATCATAA 5858 ||| ||| || | ||||| |||| ||| |||||||||||||| | ||||||||| Sbjct 6048 GGTGGGCCAAAGGGCATGGGATGCGTTAATGCGCTGGCATACATTCCGGAAATATCATAA 6107 Query 5859 ACATATACTGGTTCTTCTAATATTCCTATATAATTTAAATAACATCGTCCTCCTCTTATA 5918 ||||| | ||||| || || | ||||| ||| | || || ||||| ||||| || Sbjct 6108 ACATAAATAGGTTCCTCAAAAACACCTATGTAAGTGGGGTAGCACCGTCCCCCTCTGATG 6167 Query 5919 CTACTTCTAACATATTCATACATTTCTTTTGAAGGAGCAT--ATAGTATTTCATCTAA-- 5974 || ||| ||| | ||||| || || | ||| || || | |||||| | | || Sbjct 6168 CTTTCTCTTACAAAATCATAAATGTCGTGTGACGGGGCCAGAAGAGTATTCGA-CAAATG 6226 Query 5975 ATTTGGACCTAAAAGATTTTCAGATTTATATAAACATTGTTTAAAAATTGCATGTGAATT 6034 || | |||| |||| || ||| | | ||| |||||||||||| ||||| Sbjct 6227 ATGTTTTTCTAAC---TTTTGAGTCTTAAACACCAGTTGCTTAAAAATTGCAAAAGAATT 6283 Query 6035 AGAGCTAATAGTTGGTCTTTGAAAAATATTAAAATTTGAA--TTTGGTAAGTTTACTGCT 6092 |||||||| ||||| | ||||||| ||||||||| || | | || | || | Sbjct 6284 TGAGCTAATTGTTGGACGCTGAAAAACATTAAAATTACAAGCTATCATATGCAAGCTTTT 6343 Query 6093 TCTGCTATAAAATTTTTATAAGA-TAATAGTAATTTGTTTACAAGTTCTGAAGTTACATT 6151 | || |||||| ||| ||| || | ||| | | ||| | || |||||| ||| | Sbjct 6344 T-TG-TATAAAGTTTAAATATGAATCATACAGACAA-TGTACTAATTGTGAAGTAACAAT 6400 Query 6152 TACATCTAAAATACAATAATCTATTGTTTCTTGAACAATGTCATAACTAG-GTTTTTTGG 6210 |||||| || |||||| | | | || | |||||||||| | | ||| || Sbjct 6401 AACATCTTGAACACAATATGCCAAAACATTTTTTATAATGTCATAATTTTTGATTTGTGA 6460 Query 6211 ATTGTTTCCAAATTTGTTTATTNNNNNNNNNNNNNNCACTATTTTTCC-AGTATTTACAA 6269 | | |||||| | | |||||| ||| || ||| | | | || Sbjct 6461 ACT-TTTCCACAGATCTTTATTAAAAGTGT-------ACTCTTCTTCGGAATCCCAATAA 6512 Query 6270 GCA------GGAAAACCATCTTCATCAGTTTGGTAGGTTCCTAACATATAAAATTCATTT 6323 || ||||| || |||| ||| |||||| |||| |||| ||||||||||| Sbjct 6513 GCGACGTCTGGAAATCCGTCTTGATCTACCAGGTAGGATCCTTTCATAAAAAATTCATTT 6572 Query 6324 ACTGCGGTATATGGACAGCAGCCTTTTTTAATATTTAAATTATAAGCTTTAGCTGCATTT 6383 | || | || || || | || ||| || ||||||||||| |||| || || ||| Sbjct 6573 ATGGCTTTGTAAGGGCAATAACCCTTTGTAGCTTTTAAATTATAGGCTTCGGCCGCCTTT 6632 Query 6384 TCTAAACTGGTATGGGTTAAAGCGTAAGTATCTCTAACCATAACTTTTACAAATTGGTAT 6443 ||||||||| |||||||| | | ||||| | ||||||| |||||||||||| | | Sbjct 6633 CTTAAACTGGTGTGGGTTAATTGGAATGTATCACGGACCATAAATTTTACAAATTGATGT 6692 Query 6444 TTTAAATCTTGTG-GGTTACAAATTCCTTCCTGCCATATTTTATAAGTTTCTTTTGTAGG 6502 | | || || |||||| || || || ||||| | || || ||| | Sbjct 6693 TGCATGTCGGATGCGGTTAC-TATGCCCTCTTGCCAAGCAGCAAAATTTGGCTTTTT--- 6748 Query 6503 TTTAATATATTCTGGATTTGGAAGAGCAAAGGTAACATCATTAAATAAAATTTTACCACA 6562 || || | | |||||| || | ||| | ||| | ||||||||||||||||||||| Sbjct 6749 TTCAA---ACTTTGGATTAGGTAAAGCTATGGTTATATCATTAAATAAAATTTTACCGTT 6805 Query 6563 TCTAGGCATGAAATTTCTTAATATTTTAAATCCTTTAGGTACGGA--ATATTTATTATTA 6620 ||| || | ||||| | | | | ||| | | || | || || ||| | || Sbjct 6806 TCTGGGTAAAAAATTCCGTCTCACTAAAAAACAGT--CGTCCAGATCATTGTTAGTGTTT 6863 Query 6621 ATAACTTGTGCTGCAAGAACAATTTCATCAAAACCTGTAATGTTATGTCCTACTATATAA 6680 | || || || ||||| || ||||||||||| || | ||||| ||||| | | ||| Sbjct 6864 AATACCTGAGCGGCAAGCACGATTTCATCAAATCCGTTTATGTTGTGTCCAATCACATAT 6923 Query 6681 AATTCTATTAAACGA 6695 | ||| || ||| || Sbjct 6924 ATTTC-ATAAAAGGA 6937 Score = 208 bits (230), Expect = 1e-49 Identities = 405/589 (69%), Gaps = 7/589 (1%) Strand=Plus/Plus Query 8852 ATATGTGTAATACCATATCCTTGCATAGGTTGAATTAAACCTAAATCAGCAACTACTCTA 8911 || || || | |||||| || || | || | | |||| | | ||| || |||||| Sbjct 9065 ATTTGAGTCAGACCATAGCCGTGAAACGGGCGTAATAAAGCAAGATCGGCTGTTACTCTG 9124 Query 8912 TCAGCTAAAATTGATTGTTGAATTTGAGATAAAGTTTCTTGAAAATTATCTAAATCTAAA 8971 || || || || ||| || || || | ||||| | |||||| | || || ||| Sbjct 9125 TCCGCCAAGATACTTTGCTGTATCTGCCTCAGTGTTTCATCAAAATTGCCAAAGTCCAAA 9184 Query 8972 AATCTTTGATATGTACCAGTATTTAATGTATAGGTACAATTACTAACCATGGACCAATTT 9031 || || ||||| | |||||||| | ||||| ||| | | ||||| ||||||| Sbjct 9185 AACCTGTGATAAGCTCCAGTATTGACCACATAGGAACATGTTCCCACCATAGACCAATCC 9244 Query 9032 AAAAGTTGTTGCATTGGACCATGTAT-TTCATGATATTTAATTTTACTATAAGCTCGAGT 9090 | || ||| ||||||| | ||||| || | |||||| || || ||| ||| | Sbjct 9245 ATAATTTGAAGCATTGGTCT-TGTATATTGTTCATATTTGATATTGCTAAAAGTCCTCTC 9303 Query 9091 GTCAAAGATGTAGTCATTACACACTCTTATAACATATTGGTATCCAACTAAAAAATGGGG 9150 ||||| | || ||||||||| ||||| | || | |||||| | |||||||| || Sbjct 9304 ATCAAATACATAATCATTACACTTTCTTAATATGTAATTGTATCCTAACAAAAAATGAGG 9363 Query 9151 TGGTGGATATAAATATAATGGCCATCTTATTGTAGCTGGTTGACGTGGACTTAAATTCAT 9210 |||||| || | |||||| ||||| || ||| | || | ||| ||||| | Sbjct 9364 TGGTGGGTACATATATAAGGGCCAATGTAATGTTGGAGGACTTCTTGGGGCCAAATTTAA 9423 Query 9211 TAACATTAATTGGGGATAATTATAAATATAACGT-GACATCCAAGTAAGGCCTGCAGCT- 9268 | ||| | |||||| ||| ||||| ||| |||||||| | | || || ||| Sbjct 9424 AAGCATAGTTCTTTGATAATCATAGATATA-CGTAGACATCCATTTTAAACCAGC-GCTA 9481 Query 9269 GTAGTTGAGGCTCGTGTCCATTCTTGCACACGTCCCCAAAAATTTCTGATCGGTCTAAAA 9328 || | || || |||||||| | ||| || ||||| ||||| ||||| |||| Sbjct 9482 GTTATGGATGCCCGTGTCCAGTTTTGAGCATTGTTCCAAATATTTCGCTGCGGTCGAAAA 9541 Query 9329 AGTTCCATGGTATAGATTGATTGACCAGTAAGGCGAGCGTAGTCCATGGCGTTCTGAAA- 9387 |||||||| |||| | | ||| |||||||| || || | |||| || |||||||| Sbjct 9542 AGTTCCATAGTATGAACGGTTTGTCCAGTAAGTCGCGCACACTCCAATGCATTCTGAAAA 9601 Query 9388 GAAGAAATATGGCCTTTCAGATGCATCCAGTACTTCGCCAGATGAAAAA 9436 ||||| ||||| |||||||||||||||| |||||||| || |||||||| Sbjct 9602 GAAGACATATGACCTTTCAGATGCATCCTGTACTTCGACATATGAAAAA 9650 Score = 199 bits (220), Expect = 7e-47 Identities = 768/1189 (65%), Gaps = 42/1189 (4%) Strand=Plus/Plus Query 18774 GGAACGTTTGACAAAAGGTTTCCCGGTTTTATTAATAAAGATAAGCCTTGTTGTGCAATT 18833 || || | ||| ||| | ||||| || ||||| || || | | || ||||| ||| Sbjct 18088 GGTACCTATGATAAACGCTTTCCGGGGTTTATCCGAAAGGACAGGTTATGCTGTGCCATT 18147 Query 18834 GTAAACACGGCTTTTCGAGAAACTGGGGGAATGCATTGGATAGCATTTGCTTGGTATCCA 18893 |||||||| | |||| ||| || || | |||||||| || ||||||||| |||| Sbjct 18148 GTAAACACCGGGCTTCGCGAAGAGGGCGGTGTCCATTGGATTGCGTTTGCTTGGAATCCC 18207 Query 18894 CCAAGTTTTACATTTTATATGTTTGATCCTTTTGGTTTTTCTGATGAAAAATTAAAACAA 18953 | | |||||||| ||||||||||| || || || || ||| || | || ||| || Sbjct 18208 TATATTAAAACATTTTACATGTTTGATCCATTCGGATTCTCGGATCAAGATTTGAAAAAA 18267 Query 18954 ATTTATAATTTTGAATATAAAAGTCTTTTAAAAAGAAGTGCAATAACATCAGGAATAAAT 19013 |||| || || |||||| | | | ||| ||| || ||| || || || || Sbjct 18268 GTTTACAACTTCGAATATGAGCGAATGTTAGAAAACAGCGCAGTATTCTCCACAAAAACC 18327 Query 19014 AAATGTGTTACATTTATTAAAAGTACAGAAAGTGTTCAAGGAGGTCATAGTGCGGC--CT 19071 ||||||||||| | || | || || || || ||| | || ||| || Sbjct 18328 AAATGTGTTACTGTCATAAGCAGCTGTCAATCGGTGCA--GAGTCCCTACAATGGCTGCT 18385 Query 19072 GTGGTTTATTTTGTTGTGCTTTTTTATATTCTTTTGTTAATTATCCTTTAAATCCTATGA 19131 | ||| | |||||||||| ||||| | | ||| || |||||| |||||||| Sbjct 18386 GCGGTCTGTTTTGTTGTGTCTTTTTGAAAGCCTTTACTATGTATCCTCATTATCCTATGG 18445 Query 19132 AAAATAA---ATTTATGGATATTTTTAAAAGTGTACCAAATAA-TAAAATTTTAGAACCC 19187 | || || | | |||||| | |||| | |||| ||||||| | | |||||| ||| Sbjct 18446 ATAAGAACCCAATAATGGATTTATTTACAGGTGTGGCAAATAAATTACTTTTTAG--CCC 18503 Query 19188 CAGTGTCAGTA-TATTTTTaaaaaaaaTCAAGAAAATTTATATACCTTTTTATTATTA-A 19245 || | | | ||| ||| ||||||||||||||| | ||| | ||||||| || | | Sbjct 18504 CATTCCAAAAAATATCTTTGCTAAAAATCAAGAAAATCTGTATGCTTTTTTAT-ATGATA 18562 Query 19246 ATTCCCCTTATTTtaaatcccatgaaaatcaaataaaatgccaaacaaaatt---tgata 19302 ||| | |||||| | | | | | | | | ||||| ||| || || Sbjct 18563 ATTGTCTATATTTTCGCCGCAACGCGGCGCTATTGATTAACAAAACACAATAAACTGTTA 18622 Query 19303 aat-tgaatatgtaaaattttattaataaaattgatt--ttacaa-------ttaaaaca 19352 || |||| || ||||||| ||||| ||||| | ||| |||||||| Sbjct 18623 CATGTGAACCATCAACTTTTTATT--TAAAAGTGATTAATAACATCGTTCTTTTAAAACA 18680 Query 19353 aaCTTTCGTCCTCGTCTTCTTCACCCATGGGTAAAATGGTGGTTTGGTATTGATATTGGG 19412 | | || ||| | || || | | |||||||||| || | ||||||| | Sbjct 18681 ACCGCTCATCCGCATCATCCAGTGCAGTAGGTAAAATGGAAGTCTTAAATTGATAAAATG 18740 Query 19413 GAAGCCATTTAAAATTTTGAATTCTAATGGGAGCATGACGTTTATACACATTAATCCAAA 19472 || ||||||||| | ||| | |||||| || | || || | || ||| | Sbjct 18741 GAGTCCATTTAAATTCTTGTACAAGAATGGGGGCGGGTTCTTCCATTACTTGAAACCACA 18800 Query 19473 TTTGTTTAGCAATTTGCAAAGCAGTAACAACATCAGGAGCACTTATTTTAAAATCACAAt 19532 ||| || || | || | ||| ||| |||||| ||||| |||||||||||||||| Sbjct 18801 GTTGCTTCGCCAACTGTAGAGCGCTAATAACATCCGGAGCTGAAATTTTAAAATCACAAT 18860 Query 19533 ttttttGAGGGTTTGCCCGAGTACTTTTAAACACAGGGTTGCAACATTGAAAAACAAGCA 19592 | || | ||||| | || || || | | || ||||| || |||||||| ||||| | Sbjct 18861 TCTTATTGGGGTTGGAACGGGTGTTTCTGTATACCGGGTTACAGCATTGAAACACAAGTA 18920 Query 19593 A-TACAGGATGATCCACTGTAGCCATCAATTTAGGATCATCAATCAAAGATTTATCCATA 19651 | ||| || | || | |||||| | ||| |||| | ||| || | ||| | | Sbjct 18921 AGTAC-GGGTAATTGATGCTAGCCAGTATTTTCTGATCCTGAATAGCAGCTCCATCTAAA 18979 Query 19652 GTAGCCACAGCAGAAACAGTAAAAGGGGTAATTTTACAAGTTTGTCTGCCTAAAAGAGGC 19711 | | | |||| | |||||| || || | ||||| || || || || || | Sbjct 18980 CTGGTTGCGGCAGTTAAAGTAAATGGTGTTACCTTACAGGTCTGCCTACC---GAGTAGT 19036 Query 19712 AAATTAGTGG---CCCAATTACAATCACATTTAATTGGCATAAGCATCTTTTTATTGGCA 19768 | |||||||| ||||||| || ||||| ||||| ||||| | || | | | || || Sbjct 19037 ACATTAGTGGAACCCCAATTGCATTCACACTTAATGGGCATCAACAAGTGTGTTTTTGCG 19096 Query 19769 TCTTTCATTTTTGGATAA---GCTGCTTGCTGAAAAGCCATAATTTGCTTAAATCCTTCT 19825 | |||||| |||||| || ||| ||||||| ||||||||| | ||| | | Sbjct 19097 TTCCCCATTTTGGGATAACAGGCCGCT---TGAAAAGTCATAATTTGATAAAACGCCTGC 19153 Query 19826 CTGGCTTTTTTACCTTCAGTAAAAAACATTCCACAAGATTTTGAACAATGATTACCAGCT 19885 |||||||| || || || | |||||||||| || ||| | || | || ||| Sbjct 19154 AAAGCTTTTTTTCCATCGGTGTATGACATTCCACAGGACTTTTCAGAAAAAGTATTAGCC 19213 Query 19886 GGTACATTGATATCATTAGCGCAGCAAGCAGCATCTTCATTTTTTATTT 19934 | | || ||| | | ||| |||||||||| || || |||| || Sbjct 19214 GACGCTTTAGCATCGTGACAGCAAAAAGCAGCATCGTCGTTCTTTAATT 19262 Score = 178 bits (196), Expect = 2e-40 Identities = 303/440 (69%), Gaps = 11/440 (3%) Strand=Plus/Plus Query 15054 AAGGGAGGGTTTTTACCTCTCCTTGCCCCAATTTTGGCAGCTGCCATTGGAGCTATTCCA 15113 || ||||| |||||||| | | ||||| ||| | ||||| ||| | ||| | ||||| Sbjct 14519 AAAGGAGGTTTTTTACCATTTTTAGCCCCCATTATCGCAGCGGCCGTCGGATCAATTCCG 14578 Query 15114 GGCATTGCCTCTGTCGCTCTAAATGCTTCTCGGAATTAAAATTTGTGGGT---------- 15163 | |||||| ||||||||||| | || ||| | ||||| |||| | Sbjct 14579 GCCATTGCTTCTGTCGCTCTTCAAGCATCTAGACGATAAAAATTGTAACTTCGCAATAAA 14638 Query 15164 AAtttttttttACCAGAAATATGGAAGAAATCAATTTTGCTGCTCTTGCCCCGCGACAAG 15223 | ||| |||| ||||||| |||||||| |||| |||||| | | || || || | | Sbjct 14639 ACTTTCCTTTTGCCAGAAA-ATGGAAGATATCACTTTTGCATCATTAGCTCCACGTCGCG 14697 Query 15224 GCACTAAACCTTTGATTGGCGCTTGGTCAAATATTGGAACCAGTGAAATGAATGGCGGCG 15283 | ||||| || | | ||||||||| |||||||||| ||| ||||||||||||||| Sbjct 14698 GTTTGAAACCGATGCTGAGTGCTTGGTCAGATATTGGAACAAGTCAAATGAATGGCGGCG 14757 Query 15284 CCTTTAACTGGGGAAGTTTGTTAAGTGGTTTAAAAGTATTTGGCAATGCAGTCAAAGATT 15343 | || || ||||||| ||| |||||||||||| | || | | || | | Sbjct 14758 CTTTCAATTGGGGAACACTGTGGAGTGGTTTAAAATCTATAGGTTCTTCGGTTGCTAACT 14817 Query 15344 TAGGAAGAAAAGCTTTAAACAGTAGTACAGGGCAGGCCTTGAAACAAAAATTAAAAGATA 15403 | || ||||||| | |||| |||| | | | ||||||||||||||||||| Sbjct 14818 TGGGGTCTAAAGCTTGGCAAAGTAACACAGCTAATCTCATTAAACAAAAATTAAAAGATA 14877 Query 15404 CAAATTTACAAGAAAAAATAGTAGAAGGAATAAGTTCAGGTATTCATGGAGCTGTTGATA 15463 |||| | || || || || | |||||| | ||||||||| |||| |||| | ||| Sbjct 14878 CAAAAATTCAGGATAAGATCGCAGAAGGGGTCAGTTCAGGTCTTCACGGAGTGATAGATT 14937 Query 15464 TAGCTAATCAAGAAATTCAA 15483 |||| | || |||||| || Sbjct 14938 TAGCACAACAGGAAATTGAA 14957 Score = 120 bits (132), Expect = 6e-23 Identities = 162/226 (72%), Gaps = 0/226 (0%) Strand=Plus/Plus Query 10005 GATTTAATTAATATTTTACAGTCTATTATTGTGCAAGAAACTACTTTATCTATTTCTGAA 10064 ||| | || ||| || | ||| | || ||||| ||||||| | ||| ||| Sbjct 10201 GATATGATAAATGTTCTTCAGACAATAATTGTTCAAGAAAGACAAATGGGTATCGGTGAG 10260 Query 10065 AAAGTAGCAGCAATAAATTATTCTATTATTTCTTTGGGTAAATTTTATGCTAGAAAAATT 10124 || ||| | || || || ||||| | || || ||||||||||||||||||| |||||| Sbjct 10261 AAGGTATCGGCTATTAACTATTCAGTGATGACTCTGGGTAAATTTTATGCTAGGAAAATT 10320 Query 10125 TTTCAATCACCATTTGTACCTTTAGATAAAGAAGTAAAAATTGACACTTTTTATATGAGA 10184 | | | | | |||||||| |||||||||| ||||||||||| || |||| ||||||| Sbjct 10321 TATAACGCTCGTTTTGTACCATTAGATAAAGTGGTAAAAATTGAAACATTTTTTATGAGA 10380 Query 10185 ATGGTTTTAAAAATTTTAGTTTTAAGTGATGATTTAGGAATTTATA 10230 | || | | || ||| |||||||| |||| ||||| |||| Sbjct 10381 CTTGTCATGCAGATCTTAACTTTAAGTGTAAATTTGGGAATGTATA 10426 Score = 113 bits (124), Expect = 8e-21 Identities = 198/286 (69%), Gaps = 2/286 (1%) Strand=Plus/Plus Query 21475 TGTATGCAACAATTTTTTACAGATAAAAATGTATTTaaaaaaaTAGAAGAAAATCTACAT 21534 |||||| || ||||||| ||| ||| ||| | |||||||| |||||| | | ||| Sbjct 20719 TGTATGGAAAGGTTTTTTAAGGATGAAACAGTAATGAAAAAAATTGAAGAATCTATCCAT 20778 Query 21535 TACATGTTTAGACATGGATATGTTAAACAAGCATGTGAAATTTCAAAAATTGAAT-TACC 21593 |||||||||| | || |||||||| | || | | ||| || || | ||| | | Sbjct 20779 TACATGTTTAAAACCGGTTATGTTAATGAGGC-TATAAAAGTTAGCAACGTAAATATCAC 20837 Query 21594 AAATATTATTTCATATATGGGAATTTTACATGAAAACAGATTAGGACAAAGTGTTTTACA 21653 |||| | || || ||| | ||||| | ||||||||| | | || |||| ||||||||| Sbjct 20838 AAATCTCATATCTTATTTAGGAATCCTTCATGAAAACCGTCTGGGTCAAAATGTTTTACA 20897 Query 21654 TAATAGTTTAAAAAATGAAGCTAGAAGAGATTATATAAGAGATACTATATATTTATACTT 21713 | | | ||| | || |||| |||||| ||| | ||| || | ||||| || Sbjct 20898 TGGAAATCTAAGAGGGGAGTATAGATTAGATTACATACGTGATTGCATCTTTTTATTTTT 20957 Query 21714 AGTTTATACATGGCAAACTGCTATGGGAGTTTGGCAACAATGTTTG 21759 ||||| || |||||| | || ||||| | ||| | ||||| ||| Sbjct 20958 GGTTTACACTTGGCAAGCAGCCATGGGTATCTGGAATCAATGCTTG 21003 Score = 107 bits (118), Expect = 4e-19 Identities = 186/268 (69%), Gaps = 2/268 (1%) Strand=Plus/Plus Query 6998 AAATACAATTAAAAAAGGTACTAACTGTTTTCCAAATTGTCCATGCCATGTATAAGTTTC 7057 ||| |||| |||||| || | ||| ||||| ||||| ||||||||| ||||||||||| Sbjct 7238 AAAAACAAGTAAAAATGGAATTAATTGTTTGCCAAAGGCTCCATGCCAGGTATAAGTTTC 7297 Query 7058 AACATCATAAGTTACAAATAATTGTTCTGT-TAAAGTACAACTTCCTATAGGGAAAAAAG 7116 || |||||||| | | | | ||| ||| | | ||| || || || ||||||| Sbjct 7298 AATGTCATAAGTGATATAGACACGTTGTGTATGACTTAC-GGAGCCAATGGGAAAAAAAG 7356 Query 7117 ATATACTTTCCCACCAGTCTGCTGTTTGCACATTAATATTATGAAAATAATATTCTCGTC 7176 |||| ||| ||||||||| |||| ||| | || ||||||||| | |||| || Sbjct 7357 ATATTTTTTTCCACCAGTCACATGTTGAAGAATTTACATGGTGAAAATAAAAATCTCTTC 7416 Query 7177 TTCGTAAATTACAAGTGTGAAAATTTTTATAAATTCTACCACAATAATCACATTTTTGCA 7236 ||| | ||| | || |||||| ||| ||||||||| | |||||||| | | Sbjct 7417 TTCTGACTGAACATGAATGCGTGTTTTTAAAAAAACTACCACAAAATTCACATTTATTAA 7476 Query 7237 TTGCATTAATTTCATTTATTAAAAATAC 7264 | | |||| || |||||||| || Sbjct 7477 TACTGTCAATTGATTTAATTAAAAACAC 7504 Score = 86.0 bits (94), Expect = 1e-12 Identities = 533/837 (64%), Gaps = 41/837 (5%) Strand=Plus/Plus Query 7670 ACTTTCCTGTTGATATTCTGAATTTCTCGATGTTGACTGAGA--ATCACTGGTCCCGTTA 7727 ||| ||| || || ||||||||||||| |||| |||| || || || ||||| | Sbjct 7889 ACTCTCCGATTTATGTTCTGAATTTCTC--TGTTCTGGGAGAATATTACCGGACCCGTCA 7946 Query 7728 GTTTGAACCTAAAGGAAATTTCCATAGAATCAATATCAGCATCATTCATGGCTACTTGTT 7787 |||||| || || || | ||| | ||||||||| || |||||| ||| || |||| Sbjct 7947 CTTTGAATCTGAAAGATAATTCAACAGAATCAATTTCCATATCATTAATGTTAACCTGTT 8006 Query 7788 TTAAAATTTCTTCTATATCTCCACTATTATCATGATAAGCAATATCTGTCATTAGTTGAT 7847 || || |||| || |||| ||||| || ||| | | ||||| |||| || |||| Sbjct 8007 CTAGTATATCTTGAATGCCTCCGCTATTTTCTTGAAATGATATATCACTCATAAGCTGAT 8066 Query 7848 CAATTTCTTCTTCTGGCACT-TCTCCCATTCCTGCTCGTTCTACAGACATTGC-TAAATC 7905 | | || || |||| | | | || | |||||||| ||| | || |||||| Sbjct 8067 CTAGGTCCTC----GGCAGTGTGTTGATTTTCAGCTCGTTCCACA-ATGCCGCTTAAATC 8121 Query 7906 ATTACTTATTCTATTCATTACATTAATAAAAGCATCCTGTCCATAATCTGTCCAAAGTCT 7965 | | | |||| |||| | | || || || |||| | |||| ||||| Sbjct 8122 ACGAGTGATTCGCCTCATAAGTGAGGTGAATGCTCCCGAACCATGGTTGTTCCACAGTCT 8181 Query 7966 ACTATAAATAACTTCTCCTACTGTAT---TTCTAGCTCTTAAAATAATTTGAGCTAAATT 8022 || | || || ||||| || || || ||||| | ||| | |||||||||||| Sbjct 8182 GGTAAACATTAC-TCTCC--CTTCATCTGATCGGGCTCTCAGAATTACTTGAGCTAAATT 8238 Query 8023 TAAATCCACAAATCTTG--TAAATGG---ATTGGCCATTCTAAAAGCCTGATGAAGATAA 8077 | || || || ||| |||| || | | || ||| ||| | ||| | |||| Sbjct 8239 AACATTTAC--ATGTTGATTAAAAGGCCTAGTTGCGATT---AAAACGGAATGTAAATAA 8293 Query 8078 TTTAAACTTGAGGCCACATGTTCAGTAACaaaaaaaTATAACACCCATCTACGTAAAACA 8137 ||||| ||| || | ||||| | | |||||| || |||||||| |||| Sbjct 8294 TTTAATGTTGTAGCAATGTGTTCTGCTATAAAAAAGTAAGTGACCCATCTTATCAAAAAT 8353 Query 8138 AGTTCAGTAATTTCACCCAAAGCTTCTAAACGTTGCATGACTTGATAAAAATTTACAGTA 8197 | || | |||| | | | | | | | ||||| || |||||| | | | | Sbjct 8354 GGCTCTGAAATTCCCTCTATAATGTGCACTCTAGTCATGATTTCATAAAAGGTAATTGGA 8413 Query 8198 AAATTaaaaaaaTTTTGATTTCTAACTTGAACAGATAA-TTCTTCTTCTAATAAACGTAT 8256 || ||||||| | || | || | ||| || ||| ||| || | |||| || || Sbjct 8414 AATCTAAAAAACTGTTCCTCCCTTTC-GGAAGAGGTAAGTTCCTCCTGCAATAGCCGAAT 8472 Query 8257 AACTTCTGCAATAGCATTTCTAACTTCTTCTTCAAATGTAATTTCCTG---TTCCATTTC 8313 ||| | ||||| | | || |||| || ||||| ||||| | ||| | || Sbjct 8473 AACCGCGGCAATTGTTTCCCTCACTTGATCACTAAATGGGATTTCTGGACCTTCTACATC 8532 Query 8314 A---GATTCATCCCCTTCTGGAGAAGGTGGAGGAGGAGTGACTGGGCGAGGCCTTCTTCG 8370 | | |||| | | || ||| |||| || ||| | | |||| || ||||| Sbjct 8533 ACTGGCTTCACTCTCAGATGTGCTAGGGGGAGAAG--GTGGC-GCGCGACGC---CTTCG 8586 Query 8371 ACGAGTTGGAAGAGGTAAACTGTCAATAAATCTTTGAATCATTTCCCCTCTTCGCATTCT 8430 || ||| || || ||||| || |||||||| |||| | ||| ||||| || || Sbjct 8587 TCGCGTTCTAAATGGCAAACTTTCTATAAATCTCTGAACTACTTCTCCTCTGCGACGTCG 8646 Query 8431 CATTTCTTGAGTAACAGCTCTTCCATTTTCTCTAGGTCTTAATTCAAAAGCTCCTCC 8487 |||||||| || || |||||||| |||||| |||| || |||||| || || Sbjct 8647 CATTTCTTCTGTCACTGCTCTTCCTCCTTCTCTTGGTCGCAACGTAAAAGCACCCCC 8703 Score = 84.2 bits (92), Expect = 4e-12 Identities = 78/99 (79%), Gaps = 0/99 (0%) Strand=Plus/Plus Query 20932 ATAAATTTTTATCCTTGCTTTATTGTTCCAGAAGTATTAGCTACATATCATAtttttttt 20991 || ||||| ||||| ||||||||||| ||| |||| ||| | |||||||||| ||| Sbjct 20200 ATCAATTTCTATCCACCTTTTATTGTTCCCGAATTATTGGCTTCTCATCATATTTTCTTT 20259 Query 20992 CAAAATGCAAAAATACCTTTGTCATGTAAAGCAAATAGA 21030 ||||| || |||||||| | ||||||||||||||| Sbjct 20260 GAAAATAGAATGATACCTTTAACCTGTAAAGCAAATAGA 20298 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 93124650124584