Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dipodomys_20ordii_20[refseq_20GCF_5F000151885.1_202014-12-12]
65,193 sequences; 2,236,368,823 total letters
Query= NC_030874.1
Length=29162
Score E
Sequences producing significant alignments: (Bits) Value
seq4931 753 0.0
>seq4931
Length=27746
Score = 753 bits (834), Expect = 0.0
Identities = 1387/2020 (69%), Gaps = 36/2020 (2%)
Strand=Plus/Plus
Query 16568 CCCAGATAGTGCTCTAGTATTG-GAAACTGTAAATATGCAAACACCAGATACACATTTAA 16626
||||||| ||||||| ||| ||| | | |||| ||| | |||||||| || |||
Sbjct 16027 CCCAGATTGTGCTCTT-TATGCAGAAGATTTGGATATACAAGCTCCAGATACTCACTTAG 16085
Query 16627 TTTACAAA--AT-TAATGAAGATGAGGAA-ACTCACCTCCCCAGTCTAGGGCAACAAAGT 16682
| |||||| || | | |||| || |||| | | ||| || || |||||
Sbjct 16086 TGTACAAAGCATCTCCCGGGCATGAAAAAGACTCTCTTGCCCTCGCT----CAGCAAAGC 16141
Query 16683 GCTCCAAATAGGCCAAATTATATTGCTTTTAGAGATAATTTTATAGGTTTGATGTATTAT 16742
|| ||||| |||||||||||||| | |||||| ||||| ||||| || || |||| ||||
Sbjct 16142 GCGCCAAACAGGCCAAATTATATAGGTTTTAGGGATAACTTTATCGGGTTAATGTTTTAT 16201
Query 16743 AATAGTAATGGTAACTTGGGAGTTTTAGCTGGTCAATCTTCTCAACTAAATGCTGTAGTT 16802
|| |||||| | || ||||| || ||||| |||||||| || || || |||||||| |
Sbjct 16202 AACAGTAATAGCAATTTGGGTGTATTAGCCGGTCAATCGTCACAGCTTAATGCTGTCATC 16261
Query 16803 GATTTGCAAGATAGAAATACAGAACTTTCATATCAATTAATGTTGGCAAATACTACA-GA 16861
|| | ||||| |||||||||||| | |||||||| | ||||| | ||| |||| ||
Sbjct 16262 GACCTTCAAGACAGAAATACAGAATTGTCATATCAGCTTATGTTAGATAATT-TACACGA 16320
Query 16862 TAGATCTAGATATTTTAGTCTATGGAATCAAGCAGTAGATGATTATGATCCAGATGTTAG 16921
|||| || |||||| || | ||||||||||| || ||| ||||||||||| || |
Sbjct 16321 TAGAACTCGATATTACAGCTTGTGGAATCAAGCCGTGGATTCATATGATCCAGAGGTCCG 16380
Query 16922 AGTTATTTCTAATCATGGAGTGGAAGATGAAATGCCTAACTATTGTTTTCCACTAGCTGG 16981
| | || ||| |||||| ||||| ||| | || || ||||| ||||| || ||||
Sbjct 16381 AATCATAGACAATATTGGAGTAGAAGACGAACTTCCAAATTATTGCTTTCCGTTATCTGG 16440
Query 16982 TATGGATTTCAATGTAGC-TACTGCAGTAAAAAATGATGGTAGTGCTGAAAAAACAAATA 17040
||| | | || | |||||| || || | |||| | || ||| |
Sbjct 16441 -ATGTTCTCCTATTGATTATACTGCTGTTAATCAAAATGG---------ACAAGCAATCA 16490
Query 17041 ATCAAGATAT---TGGAACTGTAAATGTAGGGTTGGGAAATGTAAGTTGTATGGAAATTA 17097
|| | ||| || || | |||| |||||||| || |||||||| |
Sbjct 16491 ATAACAATAACCCTGCGCAGGTTCTTATAGGCAAAGGAAATGTTGAATGCATGGAAATCA 16550
Query 17098 ATTTGGCAGCAAATTTGTGGAGAGGATTTT-TGTATTCTAATATAGCTTTGTATGCACCA 17156
| | || || || |||||| || ||||| ||||||||||||| || ||||| ||
Sbjct 16551 ACATAGCGGCCAACCTGTGGA-AGAATTTTCTGTATTCTAATATCGCGCTGTATCTGCCC 16609
Query 17157 GATGAATATAAACAAACTCCACCTAATATTGAATTGNNNNNNNNNNNNNNNNNNTATGCT 17216
||| | | |||| ||||| | ||| | | |||| ||||||
Sbjct 16610 GATAACTTTAAAACCACTCCCGCAAATGTGGTATTGCCGCAGGATCAGCGGCTATATGCT 16669
Query 17217 TATATGAATGGAAGAATTCCTATCACAAATCTTATTGATAGCTATGTTAATATTGGTTCA 17276
|| |||||| | ||||| | ||| | || ||| | || || || |
Sbjct 16670 TACATGAATTCTCGCATTCCAGCCGGGGGTCTGGTAGAGGATTATATCAACATAGGAACC 16729
Query 17277 AAATGGTCTCCAGATATTATGGATAATGTAAATCCATTTAATCATCACAGAAATCCTGGT 17336
| ||||| |||| | ||||| | || |||||||||||||||||||||||| |||||
Sbjct 16730 AGGTGGTCAATAGATGTGATGGACACGGTTAATCCATTTAATCATCACAGAAATACTGGT 16789
Query 17337 TTAAGATACAGATCCCAACTTTTAGGAAATGGAAGAATTTGTGAATTTCATATTCAAGTT 17396
|| || ||||| || || || ||||||||||| | | | ||||||||||| |||
Sbjct 16790 TTGAGGTACAGGTCTCAGCTATTAGGAAATGGTCGCTATGCTTCCTTTCATATTCAGGTT 16849
Query 17397 CCTCAAAAATTTTTTGCTATAAAAAATTTACTTCTTTTGCCTGGTACTTATACTTATGAA 17456
|| ||||| |||||||| | |||| ||| ||||| | || || | || | ||| |||
Sbjct 16850 CCGCAAAAGTTTTTTGCACTTAAAAGTTTGCTTCTGCTACCGGGATCGTACAGTTACGAA 16909
Query 17457 TGGGCCTTTCGAAAAGATGTTAATATGATTTTGCAAAGTACATTAGGAAATGATTTAAGA 17516
||| | ||| |||||||||| || ||||||||||| ||||| | || |||||| | ||
Sbjct 16910 TGGTCTTTTAGAAAAGATGTAAACATGATTTTGCAGAGTACTCTTGGCAATGATCTGAGG 16969
Query 17517 GCAGATGGGGCAACTATAACCATCAATAGTGTAAATTTGTATGCAAGTTTTTTCCCAATG 17576
| || || || | |||| | | || | | | | ||| | ||| || || |||
Sbjct 16970 GAGGACGGAGCGTCAGTAACATTTGACAGCATTAGCCTATTTGCTACTTTCTTTCCGATG 17029
Query 17577 TCCCATAATACTGCTTCTACTTTAGAAGCAATGTTAAGAAATGAAACAAATGATCAAACA 17636
|| ||||| |||||||||||| | ||| | ||| | | ||||| || ||||| |
Sbjct 17030 TCTCATAACACTGCTTCTACTCTGGAAACTATGCTTCGCAATGAGGTTAACGATCAGTCC 17089
Query 17637 TTTAATGATTATTTGTCTTCTGCTAATATGCTTTATCCCATTCCTCCTAAGGCTACTCAA 17696
|| || ||| | || | ||| ||||||||| | |||||||| | || |
Sbjct 17090 TTCGGCGACTATCTTTCCAGCGTTAACATGCTTTATGCTATTCCTCCGCATCAAACAACA 17149
Query 17697 CTTCCTATTTCAATTCCATCTAGAAATTGGGCTGCTTTTAGAGGATGGAGTTTTACTAGA 17756
| ||||| || |||||| | || |||||||| || |||||||| ||| |||||||||
Sbjct 17150 GTGCCTATCTCTATTCCAGCAAGGAATTGGGCGGCCTTTAGAGGTTGGGCATTTACTAGA 17209
Query 17757 ATAAAACAAAAAGAAACTCCAGCCTTAGGTTCTCCATTTGATCCTTATTTCACTTATTCT 17816
|||||||| | ||||| ||| || | || ||| ||||||| || || || | || ||
Sbjct 17210 CTAAAACAACAGGAAACACCAACCATTGGCTCTGCATTTGACCCATACTTTAGGTACTCG 17269
Query 17817 GGAAGTATTCCCTATTTAGATGGAACATTTTATTTGAACCATACCTTTAGAAGAGTTGCA 17876
|| || || |||| |||| || |||||||| || || | |||| || ||
Sbjct 17270 GGCTCAATCCCGTATTGGGATGCGACCTTTTATTTATCTCACACTATCAGAAAGGTGGCC 17329
Query 17877 ATTCAATTTGATTCTTCTGTAAGTTGGCCAGGAAATGATAGACTTTTGACACCTAATGAA 17936
|| || ||||||||||| ||||||||||| |||||||| |||||||| | ||||||||||
Sbjct 17330 ATACAGTTTGATTCTTCAGTAAGTTGGCCTGGAAATGACAGACTTTTAATACCTAATGAA 17389
Query 17937 TTTGAAATTAAAAGAACAGTTGATGGAGAAGGTTATACCACTGCTCAAAGCACTATTACT 17996
||| | || |||||| || || | ||||| |||| ||| |||| |||| ||||||
Sbjct 17390 TTTCACATAAAAAGAGAGGTGGACGCGGAAGGCTATAACACCTCTCAGAGCATAATTACT 17449
Query 17997 AAAGACTGGTTTTTAGTGCAAATGTTGGCTAATTATAATATTGGTTATCAAGGTTATTAT 18056
|| || |||| | | | |||||| | ||| | || ||||| || || ||||||| | |
Sbjct 17450 AAGGATTGGTATATGATTCAAATGCTCGCTCACTACAATATCGGATACCAAGGTTTTCAC 17509
Query 18057 TTACCTGATGAATACAAAGAAAAAAGTTATTCCTTTTTGAAAAATTTTACTCCTATGTGT 18116
|||| || || ||||| | | ||||||||||| | ||||||| || ||||||
Sbjct 17510 CTACCCACAGATTATAAAGATAGATTGTATTCCTTTTTAAGAAATTTTGAACCCATGTGT 17569
Query 18117 AGACAAGTAGTAGATACCAATTATA---GAAATTAT-AAAGGGGTAATTTTAAGTCACCA 18172
|||||||| || ||| | | | | ||| ||| || | | | |||| | | ||
Sbjct 17570 AGACAAGTTGTGGATCCTGGTAAGACGGAAAAATATCAACCCGTTGCTCTTAAAT-ATCA 17628
Query 18173 ACATAATAATTCTGGTTTTGTTGGTGCAGTAGCTGCTACTGCTCCTAGAGAGGGACATCC 18232
||||||||||| |||||| || || || | | || | || |||||
Sbjct 17629 GCATAATAATTCAGGTTTT-AAAAACCATTA--TGGACCCTTTGGGCGACAAGGCCATCC 17685
Query 18233 ATATCCTGCAAATTGGCCTTATCCATTGATAGGCCCAAATGCAGTTCCAATGAAAACAGA 18292
||||| || ||||||| || | || || | | |||| | || | || |
Sbjct 17686 TTATCCCTGTAACTGGCCTTTCCCGCTCATCGGAGAACAGGCAGGTAAAACCATTACTCA 17745
Query 18293 GAAAAAATTTCTTTGTGATAAAACTTTGTGGAGAATACCATTTTCTTCCAATTTTATGAA 18352
|| ||||||| | ||||| | ||| ||||||| || || || || ||||| ||||||
Sbjct 17746 GAGAAAATTTTTATGTGACAGAACACTGTGGAGGATTCCGTTCTCCTCCAACTTTATGTC 17805
Query 18353 TATGGGAACACTAACAGATTTAGGTCAAAATTTACTTTATTCTAATGCAGCACATGCTTT 18412
|||||||||||||||||| | || |||||||| || ||| | ||| |||| ||||||||
Sbjct 17806 CATGGGAACACTAACAGATCTGGGACAAAATTTGCTATATGCAAATTCAGCTCATGCTTT 17865
Query 18413 AGATATGACTTTTGAACTTGATCCTATGGACGAAACTACTTATTTATATATTTTGTTTGA 18472
||| ||||| | ||| | ||| | ||||| ||| | |||||| | || | |||||
Sbjct 17866 AGACATGACAGTCGAAGTAGATTCAATGGAGGAACCAACTTATCTCATGATGCTATTTGA 17925
Query 18473 AGTTTTTGATGTATGTCGCATCCATCAACCCCATAGAGGTGTAATTGAAGCAGTGTACCT 18532
||| ||||| | || | | ||||| || || ||||||| || |||| | || ||
Sbjct 17926 AGTATTTGACATGTGCAGAGTGCATCAGCCTCAACGAGGTGTCATAGAAGTTATTTATCT 17985
Query 18533 GAGAACTCCGTTTTCTGCAGGAAACGCTACAACTTAAGTA 18572
||||| || ||||| ||||| ||||| |||| ||| ||
Sbjct 17986 AAGAACCCCCTTTTCGGCAGGTAACGCCGCAACATAAATA 18025
Score = 356 bits (394), Expect = 4e-94
Identities = 877/1313 (67%), Gaps = 34/1313 (3%)
Strand=Plus/Plus
Query 12089 CGCTCCGTCTGAGGGAAGAAATAGTATTCTTTATTCACAACTTCCTCCAGTTTATGATAC 12148
||| ||| |||||||||||||||| || ||||||||| | ||| | | | |||||
Sbjct 12036 CGCGCCGACTGAGGGAAGAAATAGCATAGTTTATTCACCTTTACCTACGTTACACGATAC 12095
Query 12149 CACTAATTTATATTTAATTGATAACAAATCTGCTGATATTGAATCTCTTAATTATCAAAA 12208
|| || | || || || ||||||||| | | || || || || |||||||| ||
Sbjct 12096 AACGAAAATTTACTTTATCGATAACAAAGCATCCGACATCTCTTCCCTAAATTATCAGAA 12155
Query 12209 TGATAGAAGTAACTATCTTACTAGTGTTATTCAAAATAGTGATTTTAGTCCTATGGAAGC 12268
||| ||| ||| | || || ||||||||| ||||||| ||| ||||||
Sbjct 12156 CGATCATAGTTTATATTTAACATCCGTCATTCAAAATCCGGATTTTAATCCCCTGGAAGG 12215
Query 12269 AAGTACACAAACCATTAAATTAGATGAAAGATCACGATGGGGAGGACAATTTAAAACTAT 12328
| ||| || ||||||||||||||||| ||||||| || | || ||||| ||
Sbjct 12216 CACGGGACATCAGATAAAATTAGATGAAAGATCTAGATGGGGTGGTAATTTAAAAACCAT 12275
Query 12329 TTTACATATGGCTATTCCAAATATTAATGAATTTATGTATACTAATAATTTTAGAGTAAA 12388
| | ||| || |||||||| | || | |||| || |||| ||||||||| ||
Sbjct 12276 TCTGCATTCAAACATACCAAATATAACCGAGTACATGTTTAGTAATTCTTTTAGAGTTAA 12335
Query 12389 AGTTATGGCTGATAAA----ACCAATATTAATAGACCTATTTATAAATGGTTTGATTTAA 12444
| || | ||| || ||| | ||| ||| ||||| | | |||
Sbjct 12336 GATACCCACTCAAAAAGTTGACGGGCATTTA-AGA------TATGAATGGGTGACTCTAA 12388
Query 12445 CTATACCAGAGGGTAATTTTTCCTTAATAATGGTTTTAGAACTTATGAATAATGCAATAG 12504
| ||||| || || |||||||| || |||||| |||| | ||||| |||| ||
Sbjct 12389 CCATACCCGAAGGAAATTTTTCGGAGATTATGGTTATAGATTTGATGAACGATGCCATTA 12448
Query 12505 TTGAAAATTATATGAAAGTAGGTAGACAATATGGAGTTAAAGAGGAGGATATAGGTATTA 12564
| ||||| || || || | || ||||| || || || |||||| |||
Sbjct 12449 TCTCTCATTATTTGTCTAATGGCAGGTTACGCGGTGTTAATGAAGATGAAATAGGTGTTA 12508
Query 12565 AATTTGACACTAGAAATTTTAAACTTGGATGGGATCCTGAAAAAAGATTAGTTGCTCCAG 12624
| | |||||||||||||||||| | || | ||||| | | | ||| | || |
Sbjct 12509 AGCTGGACACTAGAAATTTTAAAATGGGTTATGATCCCTATTATAAGTTAATCATGCCCG 12568
Query 12625 G--TGTATATACTTATGAAGCTTTTCATCCAGATATTGTTTTACTACCAAATTGTGCTGT 12682
| ||||| || |||||||| |||||||| || | | ||| ||| | |||||| |
Sbjct 12569 GCATGTATCTA--TATGAAGCATTTCATCCCGACGTGATCTTAAGTCCACACTGTGCTAT 12626
Query 12683 AGATTTTACTAACAGTCGTTTAAGTAACTTATTAGGGATTAGAAAAAGATTTCCATTTCA 12742
||||||| || ||| | |||| ||| |||| || || ||||||||||| |||| |||
Sbjct 12627 TGATTTTAGCAAAAGTAGATTAAATAATCTATTGGGTATAAGAAAAAGATTACCATATCA 12686
Query 12743 AAAAGGTTTTATAATTACTTATGAAGATTTAAGAGGAGGTAATATTCCAGCTTTAAGAGA 12802
|| | |||||| || |||||||| |||||| ||| || |||||||| ||| || |||
Sbjct 12687 GAAGGATTTTATTATCACTTATGATGATTTAGTAGGGGGAAATATTCCCGCTCTATTAGA 12746
Query 12803 TGTAGAAAATGATGGGCGAGGAGATATGCAAGGCT---GGACTGCTTTaaaaaaagataa 12859
||| || || || | ||| || || | || |||| || ||
Sbjct 12747 CTTAG--AAGCATTTGC-TCAAAATA-ACATGGTTCACAAACCCCTTT--TGAAGGACCC 12800
Query 12860 aaaaGGCAGAAGTTATCATGTAGGTGAAGATCCAGAAGCAGATATAAATGATACAGCTTA 12919
| | |||| |||||||| |||| ||||| |||||||| ||| || |||
Sbjct 12801 CCATGACAGAGACTATCATGTCGGTGGTGATCCCAAAGCAGATGCGTTTGACACGTATTA 12860
Query 12920 TAGGAGTTGGTATTTAGCTTATAATTATGGAGATCCAGAGGGAGTTAAAAGTTGGACTTT 12979
|| |||||||||||||| |||||||| || |||||| || |||||| | || |
Sbjct 12861 CAGAAGTTGGTATTTAGCATATAATTACGGTCCTCCAGATGGGGTTAAATCTAAAACACT 12920
Query 12980 ATTGGTTACACCTGATATTACTTGTGGTGCTGAACAAATTTATTGGAGTCTTCCTAATCT 13039
|| || || ||| | || |||||| | |||||||| || ||||| ||||| || |
Sbjct 12921 TTTAACAACCCCAGATGTCACATGTGGTCCCGAACAAATATACTGGAGCCTTCCAGATAT 12980
Query 13040 AG--CAACTGCACCAGTAAGTTTTAGAGAT-TCTCATAGTT-CATCAAATTATCCTGTAA 13095
|| ||| | ||| ||| |||| | | || |||| | ||||| |||||
Sbjct 12981 AGTTCAA--GAACCTGTATCCTTTAAACCTACCTTTAAGTTGGAACAAAT--GCCTGTTG 13036
Query 13096 TTGGAACTGAATTAATGCCACTTCATG-CAAGAAGTTATTATAATCCTCAAGCTGTCTAT 13154
| ||| ||||| |||| || | | || | ||| || ||| | || ||||| |||
Sbjct 13037 TGGGAGTAGAATTGTTGCCGCTAAAAGCCAGGGCGTTCTT-TAACGCCCAGGCTGTGTAT 13095
Query 13155 TCTCAATTAGTAAGAGAAAGAACAGCTCAAACTCATGTATTTAATAGATTTCCAAATAAT 13214
|| || | || || ||| | ||||| ||||| || ||||||||||| |||||
Sbjct 13096 TCGCAGATGTTAGCGGATTCAACTTCGCAAACACATGTCTTCAATAGATTTCCTGATAAT 13155
Query 13215 CAGATTCTTATTCGACCACCAGCACCTACTATAACCACCATTACTGAAAACGTGCCAGCG 13274
|| || | || || |||||||| || || || | |||| | |||||||||||| |
Sbjct 13156 CAAATCTTAATCCGTCCACCAGCTCCCACAATTTGCTCCATCAGCGAAAACGTGCCATCT 13215
Query 13275 ATAACAGATCATGGAACCATACCATTAAAGAACAGCATTTCTGGTGTTCAACGAGTAACT 13334
| || ||||| ||||| || | |||||||| |||||| |||| | || || |||| |
Sbjct 13216 TTGACGGATCACGGAACAATTTCTTTAAAGAATAGCATTACTGGGATACAGCGTGTAATT 13275
Query 13335 TTAACCGATGCTAGAAGAAGACTTTGCCCATACGTAACCAAAAGTGTTGGCAT 13387
||||| || || ||||||||| ||||||||| |||||| | || ||
Sbjct 13276 TTAACAGACGCCAGAAGAAGAACGGTTCCATACGTATATAAAAGTTTAGGAAT 13328
Score = 262 bits (290), Expect = 7e-66
Identities = 563/826 (68%), Gaps = 18/826 (2%)
Strand=Plus/Plus
Query 3282 GTGAATTTTTACAAGTATATTATATAACTTACATTGCACATTTAAATACATAGGCAT-AA 3340
||| ||||||| | || | ||||| ||| || ||||||||||||||||| | ||
Sbjct 3516 GTGTATTTTTAGTAAAATTTCATATAGTTTAGTCTGAACATTTAAATACATAGGGGTCAA 3575
Query 3341 CTCCTTCTGTGGGATTTAAATACATCCATTGTAAAGCAT--CATGTTCAGGAACAGTGTT 3398
|| || | | | | ||||||||||||| | | || || ||| ||| |
Sbjct 3576 TTCACATTGCGCGCTC-ATATACATCCATTGTTGACTTTGACACGT--AGGGGTGGTGGT 3632
Query 3399 ATATATTATCCAATCATATTTGGAATGTAAATTATGATAATTAAAAATATCTTTTAAAAG 3458
|| | ||||||||||| || ||||| ||| || ||| ||||||||||| |
Sbjct 3633 GTACACGATCCAATCATAAGATGAGTGTAAGGAATGGTAGGCAAAGATATCTTTTAATAA 3692
Query 3459 AAGTGTAATTGCCAAAGGTAAATTTTTAGTATATGTATTTATAAATCTATTTAGTTGCAT 3518
|| || ||||| || |||| ||||||||| ||||| |||||||| ||||| ||
Sbjct 3693 TAGGGTGATTGCTAAGGGTAGGCCTTTAGTATAAGTATTAATAAATCTGTTTAGCTGAGC 3752
Query 3519 AGGTTGCATTTTTGGACTTAATATATGCATTTTTGCTTGAATTTTTAAAGTAGCAATATT 3578
||||||||||| || || | |||||| ||| ||||||||||||| || | |||||
Sbjct 3753 GGGTTGCATTTTGGGGCTCAGTATATGATATTTAGCTTGAATTTTTAGTGTGGATATATT 3812
Query 3579 TCCACAATTATCTTTTCTAGGATTCATATTATGTAAAACTACTAAAACAG-TA-TAACCA 3636
||||| |||||||| || |||||||||||||| || || |||||| || || ||
Sbjct 3813 TCCACTTAAATCTTTTCGCGGGTTCATATTATGTAATACCAC--AAACAGATAGTACCCG 3870
Query 3637 GTACATTTTGGAAATTTATCATGTAATTTTGAGGGAAAAGCATGAAAAAATTTAGCTATT 3696
| || ||| |||| ||| || |||||| ||||| || ||||||||||| || ||
Sbjct 3871 CTGCACGAGGGATATTTTTCAAATAGTTTTGAAGGAAACGCGTGAAAAAATTTTGCAATA 3930
Query 3697 CCTTTAGTTGAGCCTAAATTTTCCATACATTCATCCATAATTATAGCTATTGGACCTTCT 3756
| | ||||||||||||||||| ||||| || || || ||||| || || |
Sbjct 3931 GGGCTGTTCCCTCCTAAATTTTCCATACACTCATCAATGATAATGGCTATGGGTCCGGTT 3990
Query 3757 TTTGCTGCTTGAGCAAACACATTATTAGGGT-CACTAATATCATAATTATGATC-TTGAA 3814
|| || || || |||| |||||| || | | |||| ||||||||| | || || ||
Sbjct 3991 TTGGCCGCCTGTACAAATTTATTATTTGGATGCCCTAA-ATCATAATTTTCTTCGTTTAA 4049
Query 3815 TAAATTCATCATAAGACATTTTAATAAATTTTGGCATTAAAGTAGAACTTTGAGGTATAA 3874
| | || | || || | || ||| || |||| ||| | | ||||| | ||
Sbjct 4050 GAGA-TCCTTGTACGATAGTTGCGCGAATCGAGGAGTTAATGTACCAGTCTGAGGCACAA 4108
Query 3875 CTATTCCATCAGGTCCAGCTAAATAATTTCCTTCACATATTTGACTTTCCCATGCTGAAA 3934
| |||| ||| ||| ||||| || ||||| || ||||| ||
Sbjct 4109 TTTCACCATTCTTTCCCATGTTATAGTTTCCCTCTATAATTTGTGCTTTCCATGACATAA 4168
Query 3935 ATTCATGAGGGGGTATCATGTC--AATTTGGGGCACAATAAAAAATATTGTTTCTGGTTG 3992
||| || ||||| |||||||| || |||| | ||| ||||| || || ||
Sbjct 4169 TTTCCTGTGGGGGGATCATGTCTGCATAAGGGG--TTACAAAGAATATAGTCTCCGGGGC 4226
Query 3993 TGGATGAATTAATTGAGAAGATAGTAAATTTCGAAGTAACTGGGATTTTCCACTACCAGT 4052
|||| | ||||| || || | | ||||| | ||| ||||||||||||||||||||
Sbjct 4227 GGGATTTAATAATTTGGACGACATAAGATTTCTCAATAATTGGGATTTTCCACTACCAGT 4286
Query 4053 AGGACCATAAATAACCCCTATAAATGGTTGCATATTATAATTTAAA 4098
|||||||| || ||||| || | ||||| ||| | |||||||
Sbjct 4287 TGGACCATATATGACCCCAATCACCGGTTGAGTATCACCATTTAAA 4332
Score = 239 bits (264), Expect = 8e-59
Identities = 286/386 (74%), Gaps = 2/386 (1%)
Strand=Plus/Plus
Query 15824 GAAGATGGCCACTCCTTCGATGATGCCCCAGTGGGCCTACATGCACATCGCCGGTCAGGA 15883
||||||||||||||| |||||| | || || ||| | ||| | || ||||| || || ||
Sbjct 15310 GAAGATGGCCACTCCCTCGATGCTCCCGCAATGGTCTTACTTACATATCGCAGGACAAGA 15369
Query 15884 CGCTTCTGAATACCTTTCACCTGGCCTAGT-ACAGTTTGCACAAGCAACAGAAAGTTATT 15942
||||| ||||| | || ||| || | || || |||||| ||||| |||| || |
Sbjct 15370 TGCTTCAGAATATTTATCTCCT-GCGTTGTGTCAATTTGCAAGCGCAACCGAAACGTACT 15428
Query 15943 TTAATCTTGGCAGCAAATTTAGAAATCCCATGGTGGCTCCTACCCATGATGTAACCACAG 16002
|| || || |||||||||||||| | ||| || || || || |||||||| || |
Sbjct 15429 TTTCCCTAAGCGATAAATTTAGAAATCCGACGGTTGCGCCGACACACGATGTAACTACGG 15488
Query 16003 AAAGATCTCAGAGACTCCAACTCAGATTTGTACCAGTGGACAAGGAAGATACTCAATATG 16062
||||||| |||||||| ||| | |||||||| |||| ||| || |||||||| || |||
Sbjct 15489 AAAGATCGCAGAGACTACAATTAAGATTTGTTCCAGCGGAAAAAGAAGATACACAGTATA 15548
Query 16063 CTTATAAAACTCGATTTCAATTGGCTGTAGGTGATAATCGAGTTTTAGACATGGCAAGTT 16122
||| |||| | ||||||||| | | || |||||||| || | ||||| ||| |||
Sbjct 15549 CTTTTAAAGCCCGATTTCAACTCACCGTCGGTGATAACAGAATATTAGATTTGGGTAGTA 15608
Query 16123 CTTATTTTGACATTAGAGGTGTATTAGACAGAGGGCCTACATTTAAACCTTATAGTGGAA 16182
||||||||| || | || |||||||||| || | ||||||||||| ||||| |
Sbjct 15609 GTTATTTTGATATAAAGGGAAAGATAGACAGAGGTCCCTCTTTTAAACCTTACAGTGGCA 15668
Query 16183 CGGCCTATAATACTCTAGCCCCTAAA 16208
| || || |||| || ||||| |||
Sbjct 15669 CAGCATACAATAACCTTGCCCCGAAA 15694
Score = 224 bits (248), Expect = 2e-54
Identities = 902/1395 (65%), Gaps = 55/1395 (4%)
Strand=Plus/Plus
Query 5325 ATTTGATCAGAAAAAACTGtttttttATTATCTAATTTGGTAGCAAATGAGCCATATAAG 5384
|||||||| | ||| | | |||||||||||||||| |||| ||||| || || || |
Sbjct 5574 ATTTGATCCGGAAACAGTATTTTTTTATTATCTAACCTGGTGGCAAAGGAACCGTACAGT 5633
Query 5385 GCATTTGATAATAATTTTGATATATTTCTTAAAGTTTGAtttttt--tCTTTATCTGCTN 5442
|| ||||| || | ||| | || ||| || || | || | | ||| || ||
Sbjct 5634 GCGTTTGACAACAGTTTAGCGATGCTTCGCT--GTGTGCTGTTGTGGTTTTTTTCCGCGG 5691
Query 5443 NNNNNNNNNNNNNNATATTTAGTTT-TACATATTCAGCTGCTATACATTTCCATTCTGGA 5501
||||| ||| ||| ||||| ||| | || ||||| | |
Sbjct 5692 CCTCTTTTGCCGCTATATT-AGTGGCTACGTATTCTCTTGCCACGCAATTCCACTGCTCA 5750
Query 5502 AAAATTGTACTTCTATCATCAGGTAAAATTTCTACCTTCCATCCTCTATTATGTAATGTA 5561
|| | |||| || ||||| || | | | ||||||||||| |||||| || |||
Sbjct 5751 AATACTGTAACTCGCTCATCTGGGACCAACCTAATCTTCCATCCTCGATTATGCAAAGTA 5810
Query 5562 ATTATATCAATAGTAGTAGCA-ATTTCACCTTTTAAAGGTTCATTTGTCCAGCATAATCG 5620
|| ||| || | || ||| | ||| ||| ||||| ||||||||||||||| | ||
Sbjct 5811 ATGGCATCGATGGACGT-GCATACTTCGCCTCTTAAATTTTCATTTGTCCAGCAAAGACG 5869
Query 5621 ACCTCCTTTTTTAGAACAAAAAGGAGGAAGTAAATCTAAGAAATGTTCAGGTGGGGGCGT 5680
|| |||||| | |||||||| || || | | ||||||| | | ||| || |||||||
Sbjct 5870 CCCGCCTTTTCTCGAACAAAATGGCGGTAAAACATCTAAGTATTCTTC-GGCAGGGGCGT 5928
Query 5681 T-GCATCAATTGTAAGTATTCCAGGAAGTAAATTTTTATCAAAATATGAAATTGTTTTAT 5739
||||||||| || || | || | | |||||||| |||||| | | |
Sbjct 5929 CAGCATCAATTACAACAATGGCCGGTAACAGGGCAGGGTCAAAATAGGAAATTTTGTCAC 5988
Query 5740 ATTTTTGTAAATAGTAAACA-TATTTATTAATTTCAATATTTCTTTCAAATGTATTTAGG 5798
|| | ||| || | || | || | | | ||||| ||||| | ||| ||
Sbjct 5989 CGGTT-GCAAAGCGTTTTGAATACTGATAGAGAGCCAAGTTTCTGTCAAAGGGATTAAGT 6047
Query 5799 GGTTTTCCAGCTGGGAATGGATGTGTTAGTGCACTGGCATACATTCCACATATATCATAA 5858
||| ||| || | ||||| |||| ||| |||||||||||||| | |||||||||
Sbjct 6048 GGTGGGCCAAAGGGCATGGGATGCGTTAATGCGCTGGCATACATTCCGGAAATATCATAA 6107
Query 5859 ACATATACTGGTTCTTCTAATATTCCTATATAATTTAAATAACATCGTCCTCCTCTTATA 5918
||||| | ||||| || || | ||||| ||| | || || ||||| ||||| ||
Sbjct 6108 ACATAAATAGGTTCCTCAAAAACACCTATGTAAGTGGGGTAGCACCGTCCCCCTCTGATG 6167
Query 5919 CTACTTCTAACATATTCATACATTTCTTTTGAAGGAGCAT--ATAGTATTTCATCTAA-- 5974
|| ||| ||| | ||||| || || | ||| || || | |||||| | | ||
Sbjct 6168 CTTTCTCTTACAAAATCATAAATGTCGTGTGACGGGGCCAGAAGAGTATTCGA-CAAATG 6226
Query 5975 ATTTGGACCTAAAAGATTTTCAGATTTATATAAACATTGTTTAAAAATTGCATGTGAATT 6034
|| | |||| |||| || ||| | | ||| |||||||||||| |||||
Sbjct 6227 ATGTTTTTCTAAC---TTTTGAGTCTTAAACACCAGTTGCTTAAAAATTGCAAAAGAATT 6283
Query 6035 AGAGCTAATAGTTGGTCTTTGAAAAATATTAAAATTTGAA--TTTGGTAAGTTTACTGCT 6092
|||||||| ||||| | ||||||| ||||||||| || | | || | || |
Sbjct 6284 TGAGCTAATTGTTGGACGCTGAAAAACATTAAAATTACAAGCTATCATATGCAAGCTTTT 6343
Query 6093 TCTGCTATAAAATTTTTATAAGA-TAATAGTAATTTGTTTACAAGTTCTGAAGTTACATT 6151
| || |||||| ||| ||| || | ||| | | ||| | || |||||| ||| |
Sbjct 6344 T-TG-TATAAAGTTTAAATATGAATCATACAGACAA-TGTACTAATTGTGAAGTAACAAT 6400
Query 6152 TACATCTAAAATACAATAATCTATTGTTTCTTGAACAATGTCATAACTAG-GTTTTTTGG 6210
|||||| || |||||| | | | || | |||||||||| | | ||| ||
Sbjct 6401 AACATCTTGAACACAATATGCCAAAACATTTTTTATAATGTCATAATTTTTGATTTGTGA 6460
Query 6211 ATTGTTTCCAAATTTGTTTATTNNNNNNNNNNNNNNCACTATTTTTCC-AGTATTTACAA 6269
| | |||||| | | |||||| ||| || ||| | | | ||
Sbjct 6461 ACT-TTTCCACAGATCTTTATTAAAAGTGT-------ACTCTTCTTCGGAATCCCAATAA 6512
Query 6270 GCA------GGAAAACCATCTTCATCAGTTTGGTAGGTTCCTAACATATAAAATTCATTT 6323
|| ||||| || |||| ||| |||||| |||| |||| |||||||||||
Sbjct 6513 GCGACGTCTGGAAATCCGTCTTGATCTACCAGGTAGGATCCTTTCATAAAAAATTCATTT 6572
Query 6324 ACTGCGGTATATGGACAGCAGCCTTTTTTAATATTTAAATTATAAGCTTTAGCTGCATTT 6383
| || | || || || | || ||| || ||||||||||| |||| || || |||
Sbjct 6573 ATGGCTTTGTAAGGGCAATAACCCTTTGTAGCTTTTAAATTATAGGCTTCGGCCGCCTTT 6632
Query 6384 TCTAAACTGGTATGGGTTAAAGCGTAAGTATCTCTAACCATAACTTTTACAAATTGGTAT 6443
||||||||| |||||||| | | ||||| | ||||||| |||||||||||| | |
Sbjct 6633 CTTAAACTGGTGTGGGTTAATTGGAATGTATCACGGACCATAAATTTTACAAATTGATGT 6692
Query 6444 TTTAAATCTTGTG-GGTTACAAATTCCTTCCTGCCATATTTTATAAGTTTCTTTTGTAGG 6502
| | || || |||||| || || || ||||| | || || ||| |
Sbjct 6693 TGCATGTCGGATGCGGTTAC-TATGCCCTCTTGCCAAGCAGCAAAATTTGGCTTTTT--- 6748
Query 6503 TTTAATATATTCTGGATTTGGAAGAGCAAAGGTAACATCATTAAATAAAATTTTACCACA 6562
|| || | | |||||| || | ||| | ||| | |||||||||||||||||||||
Sbjct 6749 TTCAA---ACTTTGGATTAGGTAAAGCTATGGTTATATCATTAAATAAAATTTTACCGTT 6805
Query 6563 TCTAGGCATGAAATTTCTTAATATTTTAAATCCTTTAGGTACGGA--ATATTTATTATTA 6620
||| || | ||||| | | | | ||| | | || | || || ||| | ||
Sbjct 6806 TCTGGGTAAAAAATTCCGTCTCACTAAAAAACAGT--CGTCCAGATCATTGTTAGTGTTT 6863
Query 6621 ATAACTTGTGCTGCAAGAACAATTTCATCAAAACCTGTAATGTTATGTCCTACTATATAA 6680
| || || || ||||| || ||||||||||| || | ||||| ||||| | | |||
Sbjct 6864 AATACCTGAGCGGCAAGCACGATTTCATCAAATCCGTTTATGTTGTGTCCAATCACATAT 6923
Query 6681 AATTCTATTAAACGA 6695
| ||| || ||| ||
Sbjct 6924 ATTTC-ATAAAAGGA 6937
Score = 208 bits (230), Expect = 1e-49
Identities = 405/589 (69%), Gaps = 7/589 (1%)
Strand=Plus/Plus
Query 8852 ATATGTGTAATACCATATCCTTGCATAGGTTGAATTAAACCTAAATCAGCAACTACTCTA 8911
|| || || | |||||| || || | || | | |||| | | ||| || ||||||
Sbjct 9065 ATTTGAGTCAGACCATAGCCGTGAAACGGGCGTAATAAAGCAAGATCGGCTGTTACTCTG 9124
Query 8912 TCAGCTAAAATTGATTGTTGAATTTGAGATAAAGTTTCTTGAAAATTATCTAAATCTAAA 8971
|| || || || ||| || || || | ||||| | |||||| | || || |||
Sbjct 9125 TCCGCCAAGATACTTTGCTGTATCTGCCTCAGTGTTTCATCAAAATTGCCAAAGTCCAAA 9184
Query 8972 AATCTTTGATATGTACCAGTATTTAATGTATAGGTACAATTACTAACCATGGACCAATTT 9031
|| || ||||| | |||||||| | ||||| ||| | | ||||| |||||||
Sbjct 9185 AACCTGTGATAAGCTCCAGTATTGACCACATAGGAACATGTTCCCACCATAGACCAATCC 9244
Query 9032 AAAAGTTGTTGCATTGGACCATGTAT-TTCATGATATTTAATTTTACTATAAGCTCGAGT 9090
| || ||| ||||||| | ||||| || | |||||| || || ||| ||| |
Sbjct 9245 ATAATTTGAAGCATTGGTCT-TGTATATTGTTCATATTTGATATTGCTAAAAGTCCTCTC 9303
Query 9091 GTCAAAGATGTAGTCATTACACACTCTTATAACATATTGGTATCCAACTAAAAAATGGGG 9150
||||| | || ||||||||| ||||| | || | |||||| | |||||||| ||
Sbjct 9304 ATCAAATACATAATCATTACACTTTCTTAATATGTAATTGTATCCTAACAAAAAATGAGG 9363
Query 9151 TGGTGGATATAAATATAATGGCCATCTTATTGTAGCTGGTTGACGTGGACTTAAATTCAT 9210
|||||| || | |||||| ||||| || ||| | || | ||| ||||| |
Sbjct 9364 TGGTGGGTACATATATAAGGGCCAATGTAATGTTGGAGGACTTCTTGGGGCCAAATTTAA 9423
Query 9211 TAACATTAATTGGGGATAATTATAAATATAACGT-GACATCCAAGTAAGGCCTGCAGCT- 9268
| ||| | |||||| ||| ||||| ||| |||||||| | | || || |||
Sbjct 9424 AAGCATAGTTCTTTGATAATCATAGATATA-CGTAGACATCCATTTTAAACCAGC-GCTA 9481
Query 9269 GTAGTTGAGGCTCGTGTCCATTCTTGCACACGTCCCCAAAAATTTCTGATCGGTCTAAAA 9328
|| | || || |||||||| | ||| || ||||| ||||| ||||| ||||
Sbjct 9482 GTTATGGATGCCCGTGTCCAGTTTTGAGCATTGTTCCAAATATTTCGCTGCGGTCGAAAA 9541
Query 9329 AGTTCCATGGTATAGATTGATTGACCAGTAAGGCGAGCGTAGTCCATGGCGTTCTGAAA- 9387
|||||||| |||| | | ||| |||||||| || || | |||| || ||||||||
Sbjct 9542 AGTTCCATAGTATGAACGGTTTGTCCAGTAAGTCGCGCACACTCCAATGCATTCTGAAAA 9601
Query 9388 GAAGAAATATGGCCTTTCAGATGCATCCAGTACTTCGCCAGATGAAAAA 9436
||||| ||||| |||||||||||||||| |||||||| || ||||||||
Sbjct 9602 GAAGACATATGACCTTTCAGATGCATCCTGTACTTCGACATATGAAAAA 9650
Score = 199 bits (220), Expect = 7e-47
Identities = 768/1189 (65%), Gaps = 42/1189 (4%)
Strand=Plus/Plus
Query 18774 GGAACGTTTGACAAAAGGTTTCCCGGTTTTATTAATAAAGATAAGCCTTGTTGTGCAATT 18833
|| || | ||| ||| | ||||| || ||||| || || | | || ||||| |||
Sbjct 18088 GGTACCTATGATAAACGCTTTCCGGGGTTTATCCGAAAGGACAGGTTATGCTGTGCCATT 18147
Query 18834 GTAAACACGGCTTTTCGAGAAACTGGGGGAATGCATTGGATAGCATTTGCTTGGTATCCA 18893
|||||||| | |||| ||| || || | |||||||| || ||||||||| ||||
Sbjct 18148 GTAAACACCGGGCTTCGCGAAGAGGGCGGTGTCCATTGGATTGCGTTTGCTTGGAATCCC 18207
Query 18894 CCAAGTTTTACATTTTATATGTTTGATCCTTTTGGTTTTTCTGATGAAAAATTAAAACAA 18953
| | |||||||| ||||||||||| || || || || ||| || | || ||| ||
Sbjct 18208 TATATTAAAACATTTTACATGTTTGATCCATTCGGATTCTCGGATCAAGATTTGAAAAAA 18267
Query 18954 ATTTATAATTTTGAATATAAAAGTCTTTTAAAAAGAAGTGCAATAACATCAGGAATAAAT 19013
|||| || || |||||| | | | ||| ||| || ||| || || || ||
Sbjct 18268 GTTTACAACTTCGAATATGAGCGAATGTTAGAAAACAGCGCAGTATTCTCCACAAAAACC 18327
Query 19014 AAATGTGTTACATTTATTAAAAGTACAGAAAGTGTTCAAGGAGGTCATAGTGCGGC--CT 19071
||||||||||| | || | || || || || ||| | || ||| ||
Sbjct 18328 AAATGTGTTACTGTCATAAGCAGCTGTCAATCGGTGCA--GAGTCCCTACAATGGCTGCT 18385
Query 19072 GTGGTTTATTTTGTTGTGCTTTTTTATATTCTTTTGTTAATTATCCTTTAAATCCTATGA 19131
| ||| | |||||||||| ||||| | | ||| || |||||| ||||||||
Sbjct 18386 GCGGTCTGTTTTGTTGTGTCTTTTTGAAAGCCTTTACTATGTATCCTCATTATCCTATGG 18445
Query 19132 AAAATAA---ATTTATGGATATTTTTAAAAGTGTACCAAATAA-TAAAATTTTAGAACCC 19187
| || || | | |||||| | |||| | |||| ||||||| | | |||||| |||
Sbjct 18446 ATAAGAACCCAATAATGGATTTATTTACAGGTGTGGCAAATAAATTACTTTTTAG--CCC 18503
Query 19188 CAGTGTCAGTA-TATTTTTaaaaaaaaTCAAGAAAATTTATATACCTTTTTATTATTA-A 19245
|| | | | ||| ||| ||||||||||||||| | ||| | ||||||| || | |
Sbjct 18504 CATTCCAAAAAATATCTTTGCTAAAAATCAAGAAAATCTGTATGCTTTTTTAT-ATGATA 18562
Query 19246 ATTCCCCTTATTTtaaatcccatgaaaatcaaataaaatgccaaacaaaatt---tgata 19302
||| | |||||| | | | | | | | | ||||| ||| || ||
Sbjct 18563 ATTGTCTATATTTTCGCCGCAACGCGGCGCTATTGATTAACAAAACACAATAAACTGTTA 18622
Query 19303 aat-tgaatatgtaaaattttattaataaaattgatt--ttacaa-------ttaaaaca 19352
|| |||| || ||||||| ||||| ||||| | ||| ||||||||
Sbjct 18623 CATGTGAACCATCAACTTTTTATT--TAAAAGTGATTAATAACATCGTTCTTTTAAAACA 18680
Query 19353 aaCTTTCGTCCTCGTCTTCTTCACCCATGGGTAAAATGGTGGTTTGGTATTGATATTGGG 19412
| | || ||| | || || | | |||||||||| || | ||||||| |
Sbjct 18681 ACCGCTCATCCGCATCATCCAGTGCAGTAGGTAAAATGGAAGTCTTAAATTGATAAAATG 18740
Query 19413 GAAGCCATTTAAAATTTTGAATTCTAATGGGAGCATGACGTTTATACACATTAATCCAAA 19472
|| ||||||||| | ||| | |||||| || | || || | || ||| |
Sbjct 18741 GAGTCCATTTAAATTCTTGTACAAGAATGGGGGCGGGTTCTTCCATTACTTGAAACCACA 18800
Query 19473 TTTGTTTAGCAATTTGCAAAGCAGTAACAACATCAGGAGCACTTATTTTAAAATCACAAt 19532
||| || || | || | ||| ||| |||||| ||||| ||||||||||||||||
Sbjct 18801 GTTGCTTCGCCAACTGTAGAGCGCTAATAACATCCGGAGCTGAAATTTTAAAATCACAAT 18860
Query 19533 ttttttGAGGGTTTGCCCGAGTACTTTTAAACACAGGGTTGCAACATTGAAAAACAAGCA 19592
| || | ||||| | || || || | | || ||||| || |||||||| ||||| |
Sbjct 18861 TCTTATTGGGGTTGGAACGGGTGTTTCTGTATACCGGGTTACAGCATTGAAACACAAGTA 18920
Query 19593 A-TACAGGATGATCCACTGTAGCCATCAATTTAGGATCATCAATCAAAGATTTATCCATA 19651
| ||| || | || | |||||| | ||| |||| | ||| || | ||| | |
Sbjct 18921 AGTAC-GGGTAATTGATGCTAGCCAGTATTTTCTGATCCTGAATAGCAGCTCCATCTAAA 18979
Query 19652 GTAGCCACAGCAGAAACAGTAAAAGGGGTAATTTTACAAGTTTGTCTGCCTAAAAGAGGC 19711
| | | |||| | |||||| || || | ||||| || || || || || |
Sbjct 18980 CTGGTTGCGGCAGTTAAAGTAAATGGTGTTACCTTACAGGTCTGCCTACC---GAGTAGT 19036
Query 19712 AAATTAGTGG---CCCAATTACAATCACATTTAATTGGCATAAGCATCTTTTTATTGGCA 19768
| |||||||| ||||||| || ||||| ||||| ||||| | || | | | || ||
Sbjct 19037 ACATTAGTGGAACCCCAATTGCATTCACACTTAATGGGCATCAACAAGTGTGTTTTTGCG 19096
Query 19769 TCTTTCATTTTTGGATAA---GCTGCTTGCTGAAAAGCCATAATTTGCTTAAATCCTTCT 19825
| |||||| |||||| || ||| ||||||| ||||||||| | ||| | |
Sbjct 19097 TTCCCCATTTTGGGATAACAGGCCGCT---TGAAAAGTCATAATTTGATAAAACGCCTGC 19153
Query 19826 CTGGCTTTTTTACCTTCAGTAAAAAACATTCCACAAGATTTTGAACAATGATTACCAGCT 19885
|||||||| || || || | |||||||||| || ||| | || | || |||
Sbjct 19154 AAAGCTTTTTTTCCATCGGTGTATGACATTCCACAGGACTTTTCAGAAAAAGTATTAGCC 19213
Query 19886 GGTACATTGATATCATTAGCGCAGCAAGCAGCATCTTCATTTTTTATTT 19934
| | || ||| | | ||| |||||||||| || || |||| ||
Sbjct 19214 GACGCTTTAGCATCGTGACAGCAAAAAGCAGCATCGTCGTTCTTTAATT 19262
Score = 178 bits (196), Expect = 2e-40
Identities = 303/440 (69%), Gaps = 11/440 (3%)
Strand=Plus/Plus
Query 15054 AAGGGAGGGTTTTTACCTCTCCTTGCCCCAATTTTGGCAGCTGCCATTGGAGCTATTCCA 15113
|| ||||| |||||||| | | ||||| ||| | ||||| ||| | ||| | |||||
Sbjct 14519 AAAGGAGGTTTTTTACCATTTTTAGCCCCCATTATCGCAGCGGCCGTCGGATCAATTCCG 14578
Query 15114 GGCATTGCCTCTGTCGCTCTAAATGCTTCTCGGAATTAAAATTTGTGGGT---------- 15163
| |||||| ||||||||||| | || ||| | ||||| |||| |
Sbjct 14579 GCCATTGCTTCTGTCGCTCTTCAAGCATCTAGACGATAAAAATTGTAACTTCGCAATAAA 14638
Query 15164 AAtttttttttACCAGAAATATGGAAGAAATCAATTTTGCTGCTCTTGCCCCGCGACAAG 15223
| ||| |||| ||||||| |||||||| |||| |||||| | | || || || | |
Sbjct 14639 ACTTTCCTTTTGCCAGAAA-ATGGAAGATATCACTTTTGCATCATTAGCTCCACGTCGCG 14697
Query 15224 GCACTAAACCTTTGATTGGCGCTTGGTCAAATATTGGAACCAGTGAAATGAATGGCGGCG 15283
| ||||| || | | ||||||||| |||||||||| ||| |||||||||||||||
Sbjct 14698 GTTTGAAACCGATGCTGAGTGCTTGGTCAGATATTGGAACAAGTCAAATGAATGGCGGCG 14757
Query 15284 CCTTTAACTGGGGAAGTTTGTTAAGTGGTTTAAAAGTATTTGGCAATGCAGTCAAAGATT 15343
| || || ||||||| ||| |||||||||||| | || | | || | |
Sbjct 14758 CTTTCAATTGGGGAACACTGTGGAGTGGTTTAAAATCTATAGGTTCTTCGGTTGCTAACT 14817
Query 15344 TAGGAAGAAAAGCTTTAAACAGTAGTACAGGGCAGGCCTTGAAACAAAAATTAAAAGATA 15403
| || ||||||| | |||| |||| | | | |||||||||||||||||||
Sbjct 14818 TGGGGTCTAAAGCTTGGCAAAGTAACACAGCTAATCTCATTAAACAAAAATTAAAAGATA 14877
Query 15404 CAAATTTACAAGAAAAAATAGTAGAAGGAATAAGTTCAGGTATTCATGGAGCTGTTGATA 15463
|||| | || || || || | |||||| | ||||||||| |||| |||| | |||
Sbjct 14878 CAAAAATTCAGGATAAGATCGCAGAAGGGGTCAGTTCAGGTCTTCACGGAGTGATAGATT 14937
Query 15464 TAGCTAATCAAGAAATTCAA 15483
|||| | || |||||| ||
Sbjct 14938 TAGCACAACAGGAAATTGAA 14957
Score = 120 bits (132), Expect = 6e-23
Identities = 162/226 (72%), Gaps = 0/226 (0%)
Strand=Plus/Plus
Query 10005 GATTTAATTAATATTTTACAGTCTATTATTGTGCAAGAAACTACTTTATCTATTTCTGAA 10064
||| | || ||| || | ||| | || ||||| ||||||| | ||| |||
Sbjct 10201 GATATGATAAATGTTCTTCAGACAATAATTGTTCAAGAAAGACAAATGGGTATCGGTGAG 10260
Query 10065 AAAGTAGCAGCAATAAATTATTCTATTATTTCTTTGGGTAAATTTTATGCTAGAAAAATT 10124
|| ||| | || || || ||||| | || || ||||||||||||||||||| ||||||
Sbjct 10261 AAGGTATCGGCTATTAACTATTCAGTGATGACTCTGGGTAAATTTTATGCTAGGAAAATT 10320
Query 10125 TTTCAATCACCATTTGTACCTTTAGATAAAGAAGTAAAAATTGACACTTTTTATATGAGA 10184
| | | | | |||||||| |||||||||| ||||||||||| || |||| |||||||
Sbjct 10321 TATAACGCTCGTTTTGTACCATTAGATAAAGTGGTAAAAATTGAAACATTTTTTATGAGA 10380
Query 10185 ATGGTTTTAAAAATTTTAGTTTTAAGTGATGATTTAGGAATTTATA 10230
| || | | || ||| |||||||| |||| ||||| ||||
Sbjct 10381 CTTGTCATGCAGATCTTAACTTTAAGTGTAAATTTGGGAATGTATA 10426
Score = 113 bits (124), Expect = 8e-21
Identities = 198/286 (69%), Gaps = 2/286 (1%)
Strand=Plus/Plus
Query 21475 TGTATGCAACAATTTTTTACAGATAAAAATGTATTTaaaaaaaTAGAAGAAAATCTACAT 21534
|||||| || ||||||| ||| ||| ||| | |||||||| |||||| | | |||
Sbjct 20719 TGTATGGAAAGGTTTTTTAAGGATGAAACAGTAATGAAAAAAATTGAAGAATCTATCCAT 20778
Query 21535 TACATGTTTAGACATGGATATGTTAAACAAGCATGTGAAATTTCAAAAATTGAAT-TACC 21593
|||||||||| | || |||||||| | || | | ||| || || | ||| | |
Sbjct 20779 TACATGTTTAAAACCGGTTATGTTAATGAGGC-TATAAAAGTTAGCAACGTAAATATCAC 20837
Query 21594 AAATATTATTTCATATATGGGAATTTTACATGAAAACAGATTAGGACAAAGTGTTTTACA 21653
|||| | || || ||| | ||||| | ||||||||| | | || |||| |||||||||
Sbjct 20838 AAATCTCATATCTTATTTAGGAATCCTTCATGAAAACCGTCTGGGTCAAAATGTTTTACA 20897
Query 21654 TAATAGTTTAAAAAATGAAGCTAGAAGAGATTATATAAGAGATACTATATATTTATACTT 21713
| | | ||| | || |||| |||||| ||| | ||| || | ||||| ||
Sbjct 20898 TGGAAATCTAAGAGGGGAGTATAGATTAGATTACATACGTGATTGCATCTTTTTATTTTT 20957
Query 21714 AGTTTATACATGGCAAACTGCTATGGGAGTTTGGCAACAATGTTTG 21759
||||| || |||||| | || ||||| | ||| | ||||| |||
Sbjct 20958 GGTTTACACTTGGCAAGCAGCCATGGGTATCTGGAATCAATGCTTG 21003
Score = 107 bits (118), Expect = 4e-19
Identities = 186/268 (69%), Gaps = 2/268 (1%)
Strand=Plus/Plus
Query 6998 AAATACAATTAAAAAAGGTACTAACTGTTTTCCAAATTGTCCATGCCATGTATAAGTTTC 7057
||| |||| |||||| || | ||| ||||| ||||| ||||||||| |||||||||||
Sbjct 7238 AAAAACAAGTAAAAATGGAATTAATTGTTTGCCAAAGGCTCCATGCCAGGTATAAGTTTC 7297
Query 7058 AACATCATAAGTTACAAATAATTGTTCTGT-TAAAGTACAACTTCCTATAGGGAAAAAAG 7116
|| |||||||| | | | | ||| ||| | | ||| || || || |||||||
Sbjct 7298 AATGTCATAAGTGATATAGACACGTTGTGTATGACTTAC-GGAGCCAATGGGAAAAAAAG 7356
Query 7117 ATATACTTTCCCACCAGTCTGCTGTTTGCACATTAATATTATGAAAATAATATTCTCGTC 7176
|||| ||| ||||||||| |||| ||| | || ||||||||| | |||| ||
Sbjct 7357 ATATTTTTTTCCACCAGTCACATGTTGAAGAATTTACATGGTGAAAATAAAAATCTCTTC 7416
Query 7177 TTCGTAAATTACAAGTGTGAAAATTTTTATAAATTCTACCACAATAATCACATTTTTGCA 7236
||| | ||| | || |||||| ||| ||||||||| | |||||||| | |
Sbjct 7417 TTCTGACTGAACATGAATGCGTGTTTTTAAAAAAACTACCACAAAATTCACATTTATTAA 7476
Query 7237 TTGCATTAATTTCATTTATTAAAAATAC 7264
| | |||| || |||||||| ||
Sbjct 7477 TACTGTCAATTGATTTAATTAAAAACAC 7504
Score = 86.0 bits (94), Expect = 1e-12
Identities = 533/837 (64%), Gaps = 41/837 (5%)
Strand=Plus/Plus
Query 7670 ACTTTCCTGTTGATATTCTGAATTTCTCGATGTTGACTGAGA--ATCACTGGTCCCGTTA 7727
||| ||| || || ||||||||||||| |||| |||| || || || ||||| |
Sbjct 7889 ACTCTCCGATTTATGTTCTGAATTTCTC--TGTTCTGGGAGAATATTACCGGACCCGTCA 7946
Query 7728 GTTTGAACCTAAAGGAAATTTCCATAGAATCAATATCAGCATCATTCATGGCTACTTGTT 7787
|||||| || || || | ||| | ||||||||| || |||||| ||| || ||||
Sbjct 7947 CTTTGAATCTGAAAGATAATTCAACAGAATCAATTTCCATATCATTAATGTTAACCTGTT 8006
Query 7788 TTAAAATTTCTTCTATATCTCCACTATTATCATGATAAGCAATATCTGTCATTAGTTGAT 7847
|| || |||| || |||| ||||| || ||| | | ||||| |||| || ||||
Sbjct 8007 CTAGTATATCTTGAATGCCTCCGCTATTTTCTTGAAATGATATATCACTCATAAGCTGAT 8066
Query 7848 CAATTTCTTCTTCTGGCACT-TCTCCCATTCCTGCTCGTTCTACAGACATTGC-TAAATC 7905
| | || || |||| | | | || | |||||||| ||| | || ||||||
Sbjct 8067 CTAGGTCCTC----GGCAGTGTGTTGATTTTCAGCTCGTTCCACA-ATGCCGCTTAAATC 8121
Query 7906 ATTACTTATTCTATTCATTACATTAATAAAAGCATCCTGTCCATAATCTGTCCAAAGTCT 7965
| | | |||| |||| | | || || || |||| | |||| |||||
Sbjct 8122 ACGAGTGATTCGCCTCATAAGTGAGGTGAATGCTCCCGAACCATGGTTGTTCCACAGTCT 8181
Query 7966 ACTATAAATAACTTCTCCTACTGTAT---TTCTAGCTCTTAAAATAATTTGAGCTAAATT 8022
|| | || || ||||| || || || ||||| | ||| | ||||||||||||
Sbjct 8182 GGTAAACATTAC-TCTCC--CTTCATCTGATCGGGCTCTCAGAATTACTTGAGCTAAATT 8238
Query 8023 TAAATCCACAAATCTTG--TAAATGG---ATTGGCCATTCTAAAAGCCTGATGAAGATAA 8077
| || || || ||| |||| || | | || ||| ||| | ||| | ||||
Sbjct 8239 AACATTTAC--ATGTTGATTAAAAGGCCTAGTTGCGATT---AAAACGGAATGTAAATAA 8293
Query 8078 TTTAAACTTGAGGCCACATGTTCAGTAACaaaaaaaTATAACACCCATCTACGTAAAACA 8137
||||| ||| || | ||||| | | |||||| || |||||||| ||||
Sbjct 8294 TTTAATGTTGTAGCAATGTGTTCTGCTATAAAAAAGTAAGTGACCCATCTTATCAAAAAT 8353
Query 8138 AGTTCAGTAATTTCACCCAAAGCTTCTAAACGTTGCATGACTTGATAAAAATTTACAGTA 8197
| || | |||| | | | | | | | ||||| || |||||| | | | |
Sbjct 8354 GGCTCTGAAATTCCCTCTATAATGTGCACTCTAGTCATGATTTCATAAAAGGTAATTGGA 8413
Query 8198 AAATTaaaaaaaTTTTGATTTCTAACTTGAACAGATAA-TTCTTCTTCTAATAAACGTAT 8256
|| ||||||| | || | || | ||| || ||| ||| || | |||| || ||
Sbjct 8414 AATCTAAAAAACTGTTCCTCCCTTTC-GGAAGAGGTAAGTTCCTCCTGCAATAGCCGAAT 8472
Query 8257 AACTTCTGCAATAGCATTTCTAACTTCTTCTTCAAATGTAATTTCCTG---TTCCATTTC 8313
||| | ||||| | | || |||| || ||||| ||||| | ||| | ||
Sbjct 8473 AACCGCGGCAATTGTTTCCCTCACTTGATCACTAAATGGGATTTCTGGACCTTCTACATC 8532
Query 8314 A---GATTCATCCCCTTCTGGAGAAGGTGGAGGAGGAGTGACTGGGCGAGGCCTTCTTCG 8370
| | |||| | | || ||| |||| || ||| | | |||| || |||||
Sbjct 8533 ACTGGCTTCACTCTCAGATGTGCTAGGGGGAGAAG--GTGGC-GCGCGACGC---CTTCG 8586
Query 8371 ACGAGTTGGAAGAGGTAAACTGTCAATAAATCTTTGAATCATTTCCCCTCTTCGCATTCT 8430
|| ||| || || ||||| || |||||||| |||| | ||| ||||| || ||
Sbjct 8587 TCGCGTTCTAAATGGCAAACTTTCTATAAATCTCTGAACTACTTCTCCTCTGCGACGTCG 8646
Query 8431 CATTTCTTGAGTAACAGCTCTTCCATTTTCTCTAGGTCTTAATTCAAAAGCTCCTCC 8487
|||||||| || || |||||||| |||||| |||| || |||||| || ||
Sbjct 8647 CATTTCTTCTGTCACTGCTCTTCCTCCTTCTCTTGGTCGCAACGTAAAAGCACCCCC 8703
Score = 84.2 bits (92), Expect = 4e-12
Identities = 78/99 (79%), Gaps = 0/99 (0%)
Strand=Plus/Plus
Query 20932 ATAAATTTTTATCCTTGCTTTATTGTTCCAGAAGTATTAGCTACATATCATAtttttttt 20991
|| ||||| ||||| ||||||||||| ||| |||| ||| | |||||||||| |||
Sbjct 20200 ATCAATTTCTATCCACCTTTTATTGTTCCCGAATTATTGGCTTCTCATCATATTTTCTTT 20259
Query 20992 CAAAATGCAAAAATACCTTTGTCATGTAAAGCAAATAGA 21030
||||| || |||||||| | |||||||||||||||
Sbjct 20260 GAAAATAGAATGATACCTTTAACCTGTAAAGCAAATAGA 20298
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 93124650124584
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |