Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dipodomys_20ordii_20[refseq_20GCF_5F000151885.1_202014-12-12]
65,193 sequences; 2,236,368,823 total letters
Query= NC_031948.1
Length=31481
Score E
Sequences producing significant alignments: (Bits) Value
seq4931 614 1e-171
>seq4931
Length=27746
Score = 614 bits (680), Expect = 1e-171
Identities = 1476/2208 (67%), Gaps = 75/2208 (3%)
Strand=Plus/Plus
Query 17735 AAGCAGCTCCTAACAGGCCCAACTATATAGGCTTTAGAGATAACTTCGTAGGTCTCATGT 17794
|||| || || |||||||| || |||||||| ||||| |||||||| | || | ||||
Sbjct 16138 AAGC-GCGCCAAACAGGCCAAATTATATAGGTTTTAGGGATAACTTTATCGGGTTAATGT 16196
Query 17795 ACTACAACAGCAACGGCAACCTGGGAGTACTAGCTGGACAGTCCTCTCAGCTCAATGCCG 17854
|| ||||| || |||| |||| ||| |||| || || || || ||||| ||||| |
Sbjct 16197 TTTATAACAGTAATAGCAATTTGGGTGTATTAGCCGGTCAATCGTCACAGCTTAATGCTG 16256
Query 17855 TGGTAGACCTGCAAGACAGAAACACTGAGCTATCCTATCAGCTGCTGCTAGATGCTCTCA 17914
| | ||||| ||||||||||| || || | || |||||||| || ||||| | | |
Sbjct 16257 TCATCGACCTTCAAGACAGAAATACAGAATTGTCATATCAGCTTATGTTAGATAATTT-A 16315
Query 17915 CA-GATAGAACCCGTTACTTTTCAA--TGTGGAACCAAGCTGTAGACAGTTATGACCATG 17971
|| |||||||| || || || || ||||||| ||||| || || ||||| | |
Sbjct 16316 CACGATAGAACTCGATA--TTACAGCTTGTGGAATCAAGCCGTGGATTCATATGATCCAG 16373
Query 17972 ATGTTAGAATTATTGACAACCATGGAGTGGAAGATGACATGCCCAATTACTGCTTTCCTC 18031
| || |||| || ||||| |||||| ||||| || | || ||||| ||||||||
Sbjct 16374 AGGTCCGAATCATAGACAATATTGGAGTAGAAGACGAACTTCCAAATTATTGCTTTCCGT 16433
Query 18032 TCAGTGGAATGGGGCCTTTGGTAGATGCCACAGGTATGAAATTAAATCAACAAAACAATG 18091
| |||| ||| | | || || | | | || |||| |||| ||||
Sbjct 16434 TATCTGGATGTTCTCCTATTGATTAT---ACTGCTGTTAATCAAAATGGACAAG-CAATC 16489
Query 18092 GCTTTGAAGCAAATGGAACAAATCAGGGTCCCATACAGAAGCTAGGGTTTGGAAACGTAG 18151
| | ||| | | |||| || ||| || ||||| || |
Sbjct 16490 AAT----AACAA-TAACCCTGCGCAGGTTCTTATAGGCAAA---------GGAAATGTTG 16535
Query 18152 AAGCCATGGAGATCAACTTAAACGCTAACCTCTTCAAAGGCTTTCTTTACTCTAACGTGG 18211
|| |||||| |||||| || || ||||| | || ||||| || ||||| | |
Sbjct 16536 AATGCATGGAAATCAACATAGCGGCCAACCTGTGGAAGAATTTTCTGTATTCTAATATCG 16595
Query 18212 CGCTGTATTTGCCAGACACATACAAATACACTCCTGAAAATGTCACAGTGCCGGCTAACA 18271
|||||||| |||| || | | ||| |||||| | |||||| | ||||| ||
Sbjct 16596 CGCTGTATCTGCCCGATAACTTTAAAACCACTCCCGCAAATGTGGTATTGCCG-----CA 16650
Query 18272 CTAACACC-----TATGCTTACATGAACGCCCGCCTTCCCGCTGCTAATTTAATTGATAC 18326
| || | |||||||||||||| | ||| |||| || | | | | ||
Sbjct 16651 GGATCAGCGGCTATATGCTTACATGAATTCTCGCATTCCAGCCGGGGGTCTGGTAGAGGA 16710
Query 18327 TTTCGTAAATATTGGAGCGAGGTGGTCACCTGATGTAATGGACACTGTTAACCCTTTCAA 18386
|| | || || ||| | ||||||||| ||||| |||||||| ||||| || || ||
Sbjct 16711 TTATATCAACATAGGAACCAGGTGGTCAATAGATGTGATGGACACGGTTAATCCATTTAA 16770
Query 18387 CCACCACAGAAATGCAGGACTGCGGTACCGCTCCCAGCTGCTGGGCAATGGTCGCTATTG 18446
|| ||||||||| | || || ||||| | || ||||| | || ||||||||||||
Sbjct 16771 TCATCACAGAAATACTGGTTTGAGGTACAGGTCTCAGCTATTAGGAAATGGTCGCTATGC 16830
Query 18447 CTCGTTTCATATTCAGGTGCCTCAAAAGTTTTTTGCAATCAAAAACCTCCTACTCCTTCC 18506
|| |||||||||||||| || ||||||||||||||| | |||| | || || || ||
Sbjct 16831 TTCCTTTCATATTCAGGTTCCGCAAAAGTTTTTTGCACTTAAAAGTTTGCTTCTGCTACC 16890
Query 18507 GGGGACGTATACCTACGAGTGGTCATTCAGAAAGGATGTAAACATGATTCTGCAGAGCAG 18566
||| |||| | ||||| ||||| || ||||| ||||||||||||||| ||||||| |
Sbjct 16891 GGGATCGTACAGTTACGAATGGTCTTTTAGAAAAGATGTAAACATGATTTTGCAGAGTAC 16950
Query 18567 CTTGGGAAATGATCTGAGAGTAGATGGGGCGACTATCAACA-TTCAAAGCATCAATCTCT 18625
| || ||||||||||| | || || ||| | | |||| || | ||||| | || |
Sbjct 16951 TCTTGGCAATGATCTGAGGGAGGACGGAGCGTC-AGTAACATTTGACAGCATTAGCCTAT 17009
Query 18626 ATGCAAGCTTCTTCCCAATGGCTCACAACACAGCCTCTACTTTGGAAGCCATGCTGCGGA 18685
||| | ||||| || ||| |||| ||||| || |||||| ||||| | ||||| || |
Sbjct 17010 TTGCTACTTTCTTTCCGATGTCTCATAACACTGCTTCTACTCTGGAAACTATGCTTCGCA 17069
Query 18686 ATGATGTAAATGACCAAACATTTGCAGATTATCTCTCAGCCGCTAACATGCTGTACCCTA 18745
|||| || || || || | || | || ||||| || || ||||||||| || |||
Sbjct 17070 ATGAGGTTAACGATCAGTCCTTCGGCGACTATCTTTCCAGCGTTAACATGCTTTATGCTA 17129
Query 18746 TCCCGGC-CAACACAACCAACCTGCCTATCTCAATTCCGGCCAGAAACTGGGCAGGTTTC 18804
| || | || || ||| | |||||||||| ||||| || || || ||||| | ||
Sbjct 17130 TTCCTCCGCATCA-AACAACAGTGCCTATCTCTATTCCAGCAAGGAATTGGGCGGCCTTT 17188
Query 18805 AGAGGATGGAGTTTTACTAGAATCAAGCAGAGAGAAACTCCTGCGCTGGGGTCTCCCTAT 18864
||||| ||| ||||||||| | || || ||||| || | | || ||| | | |
Sbjct 17189 AGAGGTTGGGCATTTACTAGACTAAAACAACAGGAAACACCAACCATTGGCTCTGCATTT 17248
Query 18865 GATCCTTATTTTACCTACTCTGGAACCATTCCGTACTTAGATGCTACTTTTTACCTTAGT 18924
|| || || |||| ||||| || | || ||||| | ||||| || ||||| | |
Sbjct 17249 GACCCATACTTTAGGTACTCGGGCTCAATCCCGTATTGGGATGCGACCTTTTATTTATCT 17308
Query 18925 CATACTTTCAGGAGAGTATCTATAATGTTTGACTCCTCAGTATCCTGGCCAGGAAATGAC 18984
|| ||| |||| | || | ||| |||||| || |||||| ||||| |||||||||
Sbjct 17309 CACACTATCAGAAAGGTGGCCATACAGTTTGATTCTTCAGTAAGTTGGCCTGGAAATGAC 17368
Query 18985 CGGCTTCTAACGCCCAATGAGTTCGAGATCAAAAGATATGTAGATGGGGAGGGGTACAAT 19044
| ||| ||| || ||||| || | || |||||| | || || | ||| || || ||
Sbjct 17369 AGACTTTTAATACCTAATGAATTTCACATAAAAAGAGAGGTGGACGCGGAAGGCTATAAC 17428
Query 19045 GTGGCACAGTCTAACATGACTAAAGACTGGTTCTTGGTGCAGATGCTTTCTCATTACAAC 19104
| ||| | || ||||| || |||| || | || ||||| |||| |||||
Sbjct 17429 ACCTCTCAGAGCATAATTACTAAGGATTGGTATATGATTCAAATGCTCGCTCACTACAAT 17488
Query 19105 ATTGGATATCAGGGTTACCACCTGCCAGAATCATACAAGGACAGAATGTATTCTTTCTTG 19164
|| ||||| || |||| ||||| || | || || || ||| ||||||| || ||
Sbjct 17489 ATCGGATACCAAGGTTTTCACCTACCCACAGATTATAAAGATAGATTGTATTCCTTTTTA 17548
Query 19165 AGAAATTTTGAGCCCATGTGTCGCCAGCTTGTGGATACACAAAACTATGCTGAGTACAAG 19224
||||||||||| ||||||||| | || |||||||| | || | | || |
Sbjct 17549 AGAAATTTTGAACCCATGTGTAGACAAGTTGTGGATCCTGGTAAGACGGAAAAATATCAA 17608
Query 19225 GCAGTTACAGTTGCAAACCAGCACAACAACTCTGGCTACGCCAGTGCCCTGTCCGGCTCC 19284
| ||| | || | | ||||| || || || || | | || | || ||
Sbjct 17609 CCCGTTGCTCTTAAATATCAGCATAATAATTCAGGTT---TTAAAAACCATTATGGACCC 17665
Query 19285 AACGCCAGAGAGGGGCACCCCTA-CCCTGCTAACTGGCCCTATCCCCTCATTGGCGCCAA 19343
| || | || || || || ||||| ||||||||| | || ||||| || | |
Sbjct 17666 TTTGGGCGACAAGGCCATCCTTATCCCTG-TAACTGGCCTTTCCCGCTCATCGGAGAACA 17724
Query 19344 TGCTGTACCCTCAATCACCCAGAAAAAGTTTTTGTGCGATAGGACCCTGTGGAGAATTCC 19403
|| | | || || |||| ||| ||||| || || || || |||||||| |||||
Sbjct 17725 GGCAGGTAAAACCATTACTCAGAGAAAATTTTTATGTGACAGAACACTGTGGAGGATTCC 17784
Query 19404 ATTTTCTTCCAACTTTATGTCCATGGGCACACTGACCGACCTCGGTCAGAACCTTCTGTA 19463
|| || |||||||||||||||||||| ||||| || || || || || || | || ||
Sbjct 17785 GTTCTCCTCCAACTTTATGTCCATGGGAACACTAACAGATCTGGGACAAAATTTGCTATA 17844
Query 19464 CTCCAACTCTGCTCACGCGTTGGACATGACCTTTGAGGTTGACGAGATGAATGAGCCCAC 19523
| || || ||||| || || |||||||| | || || || ||| | || || ||
Sbjct 17845 TGCAAATTCAGCTCATGCTTTAGACATGACAGTCGAAGTAGATTCAATGGAGGAACCAAC 17904
Query 19524 TCTGTTGTACG-TTTTGTTTGAAGTGTTCGACGTG-GCACGGGTCCACCAGCCTCACCGG 19581
| | | | | | | |||||||| || ||| || ||| | || || |||||||| ||
Sbjct 17905 T-TATCTCATGATGCTATTTGAAGTATTTGACATGTGCA-GAGTGCATCAGCCTCAACGA 17962
Query 19582 GGGGTCATTGAGGTAGTCTACCTCAGAACACCCTTCTCTGCCGGCAACGCCACTACTTAA 19641
|| ||||| || || | || || ||||| ||||| || || || |||||| | || ||
Sbjct 17963 GGTGTCATAGAAGTTATTTATCTAAGAACCCCCTTTTCGGCAGGTAACGCCGCAACATA- 18021
Query 19642 AAAGAACATGGCGCAAGGAGGGTCCTCTGAAGAAGAGCTTCGGGCTATTAT-TCAGAACT 19700
|| ||| ||| |||| || || || | ||||| || || |
Sbjct 18022 ----AATATG---------GGGACCTCAGAGGACGAAATAAAACGAATTATCTCCGA--T 18066
Query 19701 TAGGCGTGGGGCCCTTTTTCTTGGGAACCTTTGATAAGAGGTTTCCTGGTTTCATCTCTT 19760
| | | || | ||| ||||| |||| |||||| | ||||| || || |||
Sbjct 18067 TTG--AATGTACCTTGTTTTTTGGGTACCTATGATAAACGCTTTCCGGGGTTTATC---- 18120
Query 19761 CTCAGAGAATGGT----CTGTGCCATTGTCAACACAGCAGGAAGAGAAACTGGAGGGGTG 19816
| | || ||| |||||||||||| ||||| | | ||| || || ||
Sbjct 18121 CGAAAGGACAGGTTATGCTGTGCCATTGTAAACACCGGGCTTCGCGAAGAGGGCGGTGTC 18180
Query 19817 CATTGGCTGGCCATGGCCTGGAACCCCAGAGCTAAAAAATTTTACATGTTTGATCCTTTT 19876
|||||| | || | || ||||| ||| ||||| |||||||||||||||||| ||
Sbjct 18181 CATTGGATTGCGTTTGCTTGGAATCCCTATATTAAAACATTTTACATGTTTGATCCATTC 18240
Query 19877 GGTTTTTCTGATCAAAAGCTTAAGCAGATCTACAGCTTTGAATATGAG 19924
|| || || |||||| | | || | | |||| ||| |||||||||
Sbjct 18241 GGATTCTCGGATCAAGATTTGAAAAAAGTTTACAACTTCGAATATGAG 18288
Score = 235 bits (260), Expect = 1e-57
Identities = 509/752 (68%), Gaps = 16/752 (2%)
Strand=Plus/Plus
Query 5632 AATTTGGTCAGAAAATACAGtttttttGTTGTCTAACTTCGTGGCAAACGACCCATAGAG 5691
|||||| || | ||| | ||||||| || |||||| | |||||||| || || || ||
Sbjct 5573 AATTTGATCCGGAAACAGTATTTTTTTATTATCTAACCTGGTGGCAAAGGAACCGTACAG 5632
Query 5692 GGCGTTGGAGAGTAGCTTGGCAATGCTGCGCATGGTTTGGTTCTTGCTTTTATCTGCCAG 5751
||||| || | || || || ||||| ||| || ||| | | |||| || ||
Sbjct 5633 TGCGTTTGACAACAGTTTAGCGATGCTTCGCTGTGTGCTGTTGTGGTTTTTTTCCGCGGC 5692
Query 5752 CTCTTTGGCCTGAATGTTAAGTTGC-ACATATTCTCTAGCAAGACATTTCCACTCTGGGA 5810
|||||| ||| || ||| || || || |||||||| || | || ||||||| |
Sbjct 5693 CTCTTTTGCCGCTATATTA-GTGGCTACGTATTCTCTTGCCACGCAATTCCACTGCTCAA 5751
Query 5811 ATATGGTGGCTCTCTCATCGGGGACAAGGCGGACGGTCCAACCTCTGTTATGTAAAGTGA 5870
||| || ||| |||||| ||||| | | | |||| |||| ||||| ||||| |
Sbjct 5752 ATACTGTAACTCGCTCATCTGGGACCAACCTAATCTTCCATCCTCGATTATGCAAAGTAA 5811
Query 5871 TGACATCAATGGTAGTGGCAATTTCTCCTCGCAATGGCTCATTGGTCCAACAGAGCCGCC 5930
|| |||| |||| ||| | ||| |||| || ||||| ||||| || || ||||
Sbjct 5812 TGGCATCGATGGACGTGCATACTTCGCCTCTTAAATTTTCATTTGTCCAGCAAAGACGCC 5871
Query 5931 CGCCTTTGCGTGAGCAGAATGGGGGAAGCACATCCAAGTACTCATCCGCgggggggTCTG 5990
||||||| | || || ||||| || | ||||| ||||| || || || |||| ||| |
Sbjct 5872 CGCCTTTTCTCGAACAAAATGGCGGTAAAACATCTAAGTATTCTTCGGCAGGGGCGTCAG 5931
Query 5991 CATCGATGGTCAAGATGCCCGGGAGCAGCTCTGGGTCAAAATAGCTGATGGTTTTC---- 6046
|||| || | ||| |||| | ||| | |||||||||||| || || ||
Sbjct 5932 CATCAATTACAACAATGGCCGGTAACAGGGCAGGGTCAAAATAGGAAAT-TTTGTCACCG 5990
Query 6047 -TGGCTTTGCATCTTTACTTCGTAACACCTGACAGCCAGGGCCCGCTCGTAAGGATTAAG 6105
| || || | || | | | | | | || ||||| | | || | ||||||||
Sbjct 5991 GTTGCAAAGCGTTTTGAATAC-TGATA---GAGAGCCAAGTTTCTGTCAAAGGGATTAAG 6046
Query 6106 AGGCGGGCCGGCGGGAAAAGGATGGGTGAGGGCGCTAGCATACATGCCACATATGTCATA 6165
|| ||||| ||| | ||||| || | ||||| |||||||| || | || |||||
Sbjct 6047 TGGTGGGCCAAAGGGCATGGGATGCGTTAATGCGCTGGCATACATTCCGGAAATATCATA 6106
Query 6166 CACGTACACAGGTTGCTTTAAAATGCCTATGTAAGTGGGGTAACACCTTCCCCCTCTGAT 6225
|| || | ||||| || |||| ||||||||||||||||| |||| ||||||||||||
Sbjct 6107 AACATAAATAGGTTCCTCAAAAACACCTATGTAAGTGGGGTAGCACCGTCCCCCTCTGAT 6166
Query 6226 GCTGGCGCGAACATACTCATACATCTCATTAGAGGGTGCCAGCACAGTGGTGCCCATGTG 6285
||| | | ||| | ||||| || || | || || ||||| | ||| | || ||
Sbjct 6167 GCTTTCTCTTACAAAATCATAAATGTCGTGTGACGGGGCCAGAAGAGTATTCGACAAATG 6226
Query 6286 GGGCTGGTCGGGCTTTTCTGCTCTGTAGAGA--ATTTGTTTAAAAATAGCATGGGAGTTG 6343
| | || ||||| | ||| || | | | ||| |||||||| ||| || ||
Sbjct 6227 ATGTTTTTCTAACTTTTGAG-TCT-TAAACACCAGTTGCTTAAAAATTGCAAAAGAATTT 6284
Query 6344 GAACTTATAGTGGGACGCTGGAAGACATTGAA 6375
|| || || || |||||||| || ||||| ||
Sbjct 6285 GAGCTAATTGTTGGACGCTGAAAAACATTAAA 6316
Score = 176 bits (194), Expect = 9e-40
Identities = 432/647 (67%), Gaps = 10/647 (2%)
Strand=Plus/Plus
Query 3749 AAAGATATCTTTCAACAGAAGAGAGATAGCAGTGGGTAGACCCTTGGTGTAAATATTAAT 3808
|||||||||||| || | || | ||| || |||||| || || || ||| |||||||
Sbjct 3675 AAAGATATCTTTTAATAATAGGGTGATTGCTAAGGGTAGGCCTTTAGTATAAGTATTAAT 3734
Query 3809 AAAGCGGTTGAGCTGGGAGGGGTGAACCTTTGGACTGATAATGTGCATCTTAGCTTGAGT 3868
||| | ||| ||||| | ||| || | || || || | || || ||||||||| |
Sbjct 3735 AAATCTGTTTAGCTGAGCGGGTTGCATTTTGGGGCTCAGTATATGATATTTAGCTTGAAT 3794
Query 3869 TTTTAAGTTAGAAATGTTTCCTCCTTGATCTCTGCGGGGGTTCATGTTGTGCAAGACCAC 3928
||||| | || || ||||| | | |||| | || |||||||| || || || |||||
Sbjct 3795 TTTTAGTGTGGATATATTTCCACTTAAATCTTTTCGCGGGTTCATATTATGTAATACCAC 3854
Query 3929 GATAACAGAGTAGCCTGTGCACTTGGGATACCTGTCCAGAAGTTTACTGGGGAAAGCGTG 3988
| | | |||| || ||||| |||||| | || | ||||| || || |||||
Sbjct 3855 AAACAGATAGTACCCGCTGCACGAGGGATATTTTTCAAATAGTTTTGAAGGAAACGCGTG 3914
Query 3989 GAAAAATTTGGCAACCCCTTTGTGCCCACCGAGGTCTTCCATGCACTCGTCCATGATAAT 4048
|||||||| |||| ||| ||| || | | |||||| ||||| || ||||||||
Sbjct 3915 AAAAAATTTTGCAATAGGGCTGTTCCCTCCTAAATTTTCCATACACTCATCAATGATAAT 3974
Query 4049 AGCTATGGGACCCCTAGAGGCCGCCTTAGCAAAAACATTGTTGGGGTTGGTGACATCATA 4108
|||||||| || | |||||||| |||| ||| || || | | ||||||
Sbjct 3975 GGCTATGGGTCCGGTTTTGGCCGCCTGTACAAATTTATTATTTGGATGCCCTAAATCATA 4034
Query 4109 GTTGACATCGCTGGTGAGGTCAGCATATGACATCTGGACGAAATTTGGA-AGAATGCTAC 4167
|| | ||| | ||| || || || | || |||| ||| |||| |||
Sbjct 4035 ATTTTCTTCGTTTAAGAGATCCTTGTACGATAGTTGCGCGAATCGAGGAGTTAATG-TAC 4093
Query 4168 CGCTCTGGGGGACAA---CAGTGTTTTCTGGCCCAGCTAGATAGTTGCCCTCACAAATTT 4224
| |||| || |||| || |||| |||| | |||||| ||||| |||||
Sbjct 4094 CAGTCTGAGGCACAATTTCA--CCATTCTTTCCCATGT-TATAGTTTCCCTCTATAATTT 4150
Query 4225 GGGTTTCCCAGGCTGCAATCTCTTGAGGGGGGATCATGTCCACCTGGGGAGTAATaaaaa 4284
| | || ||| | ||| || || |||||||||||||| | | || || | ||| |
Sbjct 4151 GTGCTTTCCATGACATAATTTCCTGTGGGGGGATCATGTCTGCATAAGGGGTTACAAAGA 4210
Query 4285 aaaCTGTTTCGGGGGCTGGA-ACAATAAGCTGAGCAGACATGAGGTTTCTCAGTAGTTGT 4343
| | || || ||||| ||| ||||| || | ||||| || ||||||| || |||
Sbjct 4211 ATATAGTCTCCGGGGCGGGATTTAATAATTTG-GACGACATAAGATTTCTCAATAATTGG 4269
Query 4344 GACTTTCCACACCCTGTGGGGCCATACACTACAGCAATAAAGGGTTG 4390
|| ||||||| || || || ||||| | || |||| | |||||
Sbjct 4270 GATTTTCCACTACCAGTTGGACCATATATGACCCCAATCACCGGTTG 4316
Score = 127 bits (140), Expect = 4e-25
Identities = 259/385 (67%), Gaps = 0/385 (0%)
Strand=Plus/Plus
Query 16908 GAAGATGGCGACCCCGTCGATGCTGCCACAATGGTCTTACATGCACATTGCGGGCCAGGA 16967
||||||||| || || |||||||| || |||||||||||| | || || || || || ||
Sbjct 15310 GAAGATGGCCACTCCCTCGATGCTCCCGCAATGGTCTTACTTACATATCGCAGGACAAGA 15369
Query 16968 CGCCGCGGAATACTTGTCTCCCGCCCTGGTTCAGTTTGCCCAGGCCACCAGTTCTTACTT 17027
|| | ||||| || ||||| || || ||| ||||| || ||| | |||||
Sbjct 15370 TGCTTCAGAATATTTATCTCCTGCGTTGTGTCAATTTGCAAGCGCAACCGAAACGTACTT 15429
Query 17028 TAAGTTGGACAACAAATTCAGAAACCCCACTGTGGCCCCCACCCATGACGTGACCACAGA 17087
| | | | ||||| ||||| || || || || || || || || || || || ||
Sbjct 15430 TTCCCTAAGCGATAAATTTAGAAATCCGACGGTTGCGCCGACACACGATGTAACTACGGA 15489
Query 17088 AAGGTCACAGCGGCTGCAGCTGCGCTACGTGCCAGTCATGCAGGAGGACGGGCAGTACAC 17147
||| || ||| | || || | | | || |||| | || || ||||| ||
Sbjct 15490 AAGATCGCAGAGACTACAATTAAGATTTGTTCCAGCGGAAAAAGAAGATACACAGTATAC 15549
Query 17148 TTACAAAACCCGCTTCCAGCTGGCCGTGGGGGACAACCGGGTGCTAGATATGGCCAGCAC 17207
|| ||| |||| || || || |||| || || ||| | | ||||| ||| || |
Sbjct 15550 TTTTAAAGCCCGATTTCAACTCACCGTCGGTGATAACAGAATATTAGATTTGGGTAGTAG 15609
Query 17208 CTACTTTGACATTAGGGGTACCCTGGACCGAGGTCCCTCTTTCAAGCCCTACAGCGGCAC 17267
|| ||||| || | ||| | | ||| ||||||||||||| || || ||||| |||||
Sbjct 15610 TTATTTTGATATAAAGGGAAAGATAGACAGAGGTCCCTCTTTTAAACCTTACAGTGGCAC 15669
Query 17268 GGCCTATAATGCCTTGGCCCCCAAA 17292
|| || ||| | | ||||| |||
Sbjct 15670 AGCATACAATAACCTTGCCCCGAAA 15694
Score = 89.7 bits (98), Expect = 1e-13
Identities = 200/295 (68%), Gaps = 4/295 (1%)
Strand=Plus/Plus
Query 5054 GTTTCACATTCAACTAACCATGTTAGCTCAGGTTTG-GCTGGGTCAAATACTAAGCTGCC 5112
|| |||||||| ||||||||||||| ||| | ||| ||||| | ||| |
Sbjct 4977 GTCTCACATTCTACTAACCATGTTAAGGAAGGATCATGCTCA-TCAAAGATTAAATTATT 5035
Query 5113 CCCAttttttttGAGTCTTTTCTTACCTTTGGCCTCCATGAGTCTGTACCCTTCCTCGGT 5172
| |||| ||| ||||| | ||||||||||| |||||| ||||| | |||| || ||
Sbjct 5036 GCTGTTTTCTTTAAGTCTATGCTTACCTTTGGTCTCCATCAGTCTATGCCCTGTTTCTGT 5095
Query 5173 GCTAAAGATGCTGTCCGTGTCCCCGTAGACAGATTTTAGAGGGC-GCTGATCCAGGGGCG 5231
|| | ||||| || || ||||| | ||||||| | | || | ||| || ||
Sbjct 5096 CACGAACAAACTGTCAGTATCTCCGTAAATCGATTTTAAAATTCTGCGGTCCCAAGGTCG 5155
Query 5232 TGCCAGCGTCATCCTCGTAGAGAAACTGAGACCATTCTGACACAAATGCCCTGGTCCAGG 5291
| || || || || | ||| | | |||||| || || || | ||||||||
Sbjct 5156 T-CCCCAATCTTCAGAATATAAAAATTCCGCCCATTCGGAAGTGAAAGCGCGGGTCCAGG 5214
Query 5292 CCAAAACAAAGGAGGCAATTTGAGAGGGGTACCTGTTATTGGCTATCAGTGGGGA 5346
| | |||||| || || ||||| || ||||| | |||||| |||| |||||||
Sbjct 5215 CGAGAACAAATGACGCGATTTGGGATGGGTAGCGGTTATTATCTATTTGTGGGGA 5269
Score = 80.6 bits (88), Expect = 5e-11
Identities = 235/356 (66%), Gaps = 17/356 (5%)
Strand=Plus/Plus
Query 9427 TCAAAGACATAATCATTACATGTTCTGACTAGGTACTGATAGCCAACCAGGAAGTGGGGT 9486
||||| |||||||||||||| |||| | || ||| | || || | || || || |||
Sbjct 9305 TCAAATACATAATCATTACACTTTCTTAATATGTAATTGTATCCTAACAAAAAATGAGGT 9364
Query 9487 GGGGGATAAAGATACAAGGGCCAGCCCTGAGTGGCAGG-CTCTCTGGGGCTAAGGTTCAT 9545
|| || || | ||| |||||||| || | ||| || |||||| || || |
Sbjct 9365 GGTGGGTACATATATAAGGGCCAATGTAATGTTGGAGGACTTCTTGGGGCCAA-ATTTAA 9423
Query 9546 AAGCATGAGGCGGTGGTACTGGTAGATGTACTTAGACATCCAAGCTAAACCCACAGCGGT 9605
|||||| | || || | ||||| ||| |||||||||| ||||| ||||| |
Sbjct 9424 AAGCATAGTTCTTTGATAATCATAGATATACGTAGACATCCATTTTAAAC---CAGCGCT 9480
Query 9606 AGTTGAGGCT-CTCGTGT--AGTCGCGGACGCGATTGAAAATGTTTCTGAGAGGTCTAAA 9662
|||| || | | ||||| ||| | | || |||| |||| | |||| |||
Sbjct 9481 AGTTATGGATGCCCGTGTCCAGTTTTGAGCATTGTTCCAAATATTTCGCTGCGGTCGAAA 9540
Query 9663 TACTTCAATGGTGTACTGGGTTTGTCCTGTGAGGCGGGCGCAGTCCAGCGCGTTCTGCAA 9722
| ||| || || | ||||||||| || || || || || |||| || ||||| ||
Sbjct 9541 AAGTTCCATAGTATGAACGGTTTGTCCAGTAAGTCGCGCACACTCCAATGCATTCTG-AA 9599
Query 9723 AAACAAACAAGGAGTTTTACTCCATTGCAGATGCATCCGGTACTGCGCCAGATGAA 9778
|| | ||| || | || ||||||||||| ||||| || || |||||
Sbjct 9600 AAGAAGACA--------TATGACCTTTCAGATGCATCCTGTACTTCGACATATGAA 9647
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 100539705187038
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