Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dipodomys_20ordii_20[refseq_20GCF_5F000151885.1_202014-12-12] 65,193 sequences; 2,236,368,823 total letters Query= NC_031948.1 Length=31481 Score E Sequences producing significant alignments: (Bits) Value seq4931 614 1e-171 >seq4931 Length=27746 Score = 614 bits (680), Expect = 1e-171 Identities = 1476/2208 (67%), Gaps = 75/2208 (3%) Strand=Plus/Plus Query 17735 AAGCAGCTCCTAACAGGCCCAACTATATAGGCTTTAGAGATAACTTCGTAGGTCTCATGT 17794 |||| || || |||||||| || |||||||| ||||| |||||||| | || | |||| Sbjct 16138 AAGC-GCGCCAAACAGGCCAAATTATATAGGTTTTAGGGATAACTTTATCGGGTTAATGT 16196 Query 17795 ACTACAACAGCAACGGCAACCTGGGAGTACTAGCTGGACAGTCCTCTCAGCTCAATGCCG 17854 || ||||| || |||| |||| ||| |||| || || || || ||||| ||||| | Sbjct 16197 TTTATAACAGTAATAGCAATTTGGGTGTATTAGCCGGTCAATCGTCACAGCTTAATGCTG 16256 Query 17855 TGGTAGACCTGCAAGACAGAAACACTGAGCTATCCTATCAGCTGCTGCTAGATGCTCTCA 17914 | | ||||| ||||||||||| || || | || |||||||| || ||||| | | | Sbjct 16257 TCATCGACCTTCAAGACAGAAATACAGAATTGTCATATCAGCTTATGTTAGATAATTT-A 16315 Query 17915 CA-GATAGAACCCGTTACTTTTCAA--TGTGGAACCAAGCTGTAGACAGTTATGACCATG 17971 || |||||||| || || || || ||||||| ||||| || || ||||| | | Sbjct 16316 CACGATAGAACTCGATA--TTACAGCTTGTGGAATCAAGCCGTGGATTCATATGATCCAG 16373 Query 17972 ATGTTAGAATTATTGACAACCATGGAGTGGAAGATGACATGCCCAATTACTGCTTTCCTC 18031 | || |||| || ||||| |||||| ||||| || | || ||||| |||||||| Sbjct 16374 AGGTCCGAATCATAGACAATATTGGAGTAGAAGACGAACTTCCAAATTATTGCTTTCCGT 16433 Query 18032 TCAGTGGAATGGGGCCTTTGGTAGATGCCACAGGTATGAAATTAAATCAACAAAACAATG 18091 | |||| ||| | | || || | | | || |||| |||| |||| Sbjct 16434 TATCTGGATGTTCTCCTATTGATTAT---ACTGCTGTTAATCAAAATGGACAAG-CAATC 16489 Query 18092 GCTTTGAAGCAAATGGAACAAATCAGGGTCCCATACAGAAGCTAGGGTTTGGAAACGTAG 18151 | | ||| | | |||| || ||| || ||||| || | Sbjct 16490 AAT----AACAA-TAACCCTGCGCAGGTTCTTATAGGCAAA---------GGAAATGTTG 16535 Query 18152 AAGCCATGGAGATCAACTTAAACGCTAACCTCTTCAAAGGCTTTCTTTACTCTAACGTGG 18211 || |||||| |||||| || || ||||| | || ||||| || ||||| | | Sbjct 16536 AATGCATGGAAATCAACATAGCGGCCAACCTGTGGAAGAATTTTCTGTATTCTAATATCG 16595 Query 18212 CGCTGTATTTGCCAGACACATACAAATACACTCCTGAAAATGTCACAGTGCCGGCTAACA 18271 |||||||| |||| || | | ||| |||||| | |||||| | ||||| || Sbjct 16596 CGCTGTATCTGCCCGATAACTTTAAAACCACTCCCGCAAATGTGGTATTGCCG-----CA 16650 Query 18272 CTAACACC-----TATGCTTACATGAACGCCCGCCTTCCCGCTGCTAATTTAATTGATAC 18326 | || | |||||||||||||| | ||| |||| || | | | | || Sbjct 16651 GGATCAGCGGCTATATGCTTACATGAATTCTCGCATTCCAGCCGGGGGTCTGGTAGAGGA 16710 Query 18327 TTTCGTAAATATTGGAGCGAGGTGGTCACCTGATGTAATGGACACTGTTAACCCTTTCAA 18386 || | || || ||| | ||||||||| ||||| |||||||| ||||| || || || Sbjct 16711 TTATATCAACATAGGAACCAGGTGGTCAATAGATGTGATGGACACGGTTAATCCATTTAA 16770 Query 18387 CCACCACAGAAATGCAGGACTGCGGTACCGCTCCCAGCTGCTGGGCAATGGTCGCTATTG 18446 || ||||||||| | || || ||||| | || ||||| | || |||||||||||| Sbjct 16771 TCATCACAGAAATACTGGTTTGAGGTACAGGTCTCAGCTATTAGGAAATGGTCGCTATGC 16830 Query 18447 CTCGTTTCATATTCAGGTGCCTCAAAAGTTTTTTGCAATCAAAAACCTCCTACTCCTTCC 18506 || |||||||||||||| || ||||||||||||||| | |||| | || || || || Sbjct 16831 TTCCTTTCATATTCAGGTTCCGCAAAAGTTTTTTGCACTTAAAAGTTTGCTTCTGCTACC 16890 Query 18507 GGGGACGTATACCTACGAGTGGTCATTCAGAAAGGATGTAAACATGATTCTGCAGAGCAG 18566 ||| |||| | ||||| ||||| || ||||| ||||||||||||||| ||||||| | Sbjct 16891 GGGATCGTACAGTTACGAATGGTCTTTTAGAAAAGATGTAAACATGATTTTGCAGAGTAC 16950 Query 18567 CTTGGGAAATGATCTGAGAGTAGATGGGGCGACTATCAACA-TTCAAAGCATCAATCTCT 18625 | || ||||||||||| | || || ||| | | |||| || | ||||| | || | Sbjct 16951 TCTTGGCAATGATCTGAGGGAGGACGGAGCGTC-AGTAACATTTGACAGCATTAGCCTAT 17009 Query 18626 ATGCAAGCTTCTTCCCAATGGCTCACAACACAGCCTCTACTTTGGAAGCCATGCTGCGGA 18685 ||| | ||||| || ||| |||| ||||| || |||||| ||||| | ||||| || | Sbjct 17010 TTGCTACTTTCTTTCCGATGTCTCATAACACTGCTTCTACTCTGGAAACTATGCTTCGCA 17069 Query 18686 ATGATGTAAATGACCAAACATTTGCAGATTATCTCTCAGCCGCTAACATGCTGTACCCTA 18745 |||| || || || || | || | || ||||| || || ||||||||| || ||| Sbjct 17070 ATGAGGTTAACGATCAGTCCTTCGGCGACTATCTTTCCAGCGTTAACATGCTTTATGCTA 17129 Query 18746 TCCCGGC-CAACACAACCAACCTGCCTATCTCAATTCCGGCCAGAAACTGGGCAGGTTTC 18804 | || | || || ||| | |||||||||| ||||| || || || ||||| | || Sbjct 17130 TTCCTCCGCATCA-AACAACAGTGCCTATCTCTATTCCAGCAAGGAATTGGGCGGCCTTT 17188 Query 18805 AGAGGATGGAGTTTTACTAGAATCAAGCAGAGAGAAACTCCTGCGCTGGGGTCTCCCTAT 18864 ||||| ||| ||||||||| | || || ||||| || | | || ||| | | | Sbjct 17189 AGAGGTTGGGCATTTACTAGACTAAAACAACAGGAAACACCAACCATTGGCTCTGCATTT 17248 Query 18865 GATCCTTATTTTACCTACTCTGGAACCATTCCGTACTTAGATGCTACTTTTTACCTTAGT 18924 || || || |||| ||||| || | || ||||| | ||||| || ||||| | | Sbjct 17249 GACCCATACTTTAGGTACTCGGGCTCAATCCCGTATTGGGATGCGACCTTTTATTTATCT 17308 Query 18925 CATACTTTCAGGAGAGTATCTATAATGTTTGACTCCTCAGTATCCTGGCCAGGAAATGAC 18984 || ||| |||| | || | ||| |||||| || |||||| ||||| ||||||||| Sbjct 17309 CACACTATCAGAAAGGTGGCCATACAGTTTGATTCTTCAGTAAGTTGGCCTGGAAATGAC 17368 Query 18985 CGGCTTCTAACGCCCAATGAGTTCGAGATCAAAAGATATGTAGATGGGGAGGGGTACAAT 19044 | ||| ||| || ||||| || | || |||||| | || || | ||| || || || Sbjct 17369 AGACTTTTAATACCTAATGAATTTCACATAAAAAGAGAGGTGGACGCGGAAGGCTATAAC 17428 Query 19045 GTGGCACAGTCTAACATGACTAAAGACTGGTTCTTGGTGCAGATGCTTTCTCATTACAAC 19104 | ||| | || ||||| || |||| || | || ||||| |||| ||||| Sbjct 17429 ACCTCTCAGAGCATAATTACTAAGGATTGGTATATGATTCAAATGCTCGCTCACTACAAT 17488 Query 19105 ATTGGATATCAGGGTTACCACCTGCCAGAATCATACAAGGACAGAATGTATTCTTTCTTG 19164 || ||||| || |||| ||||| || | || || || ||| ||||||| || || Sbjct 17489 ATCGGATACCAAGGTTTTCACCTACCCACAGATTATAAAGATAGATTGTATTCCTTTTTA 17548 Query 19165 AGAAATTTTGAGCCCATGTGTCGCCAGCTTGTGGATACACAAAACTATGCTGAGTACAAG 19224 ||||||||||| ||||||||| | || |||||||| | || | | || | Sbjct 17549 AGAAATTTTGAACCCATGTGTAGACAAGTTGTGGATCCTGGTAAGACGGAAAAATATCAA 17608 Query 19225 GCAGTTACAGTTGCAAACCAGCACAACAACTCTGGCTACGCCAGTGCCCTGTCCGGCTCC 19284 | ||| | || | | ||||| || || || || | | || | || || Sbjct 17609 CCCGTTGCTCTTAAATATCAGCATAATAATTCAGGTT---TTAAAAACCATTATGGACCC 17665 Query 19285 AACGCCAGAGAGGGGCACCCCTA-CCCTGCTAACTGGCCCTATCCCCTCATTGGCGCCAA 19343 | || | || || || || ||||| ||||||||| | || ||||| || | | Sbjct 17666 TTTGGGCGACAAGGCCATCCTTATCCCTG-TAACTGGCCTTTCCCGCTCATCGGAGAACA 17724 Query 19344 TGCTGTACCCTCAATCACCCAGAAAAAGTTTTTGTGCGATAGGACCCTGTGGAGAATTCC 19403 || | | || || |||| ||| ||||| || || || || |||||||| ||||| Sbjct 17725 GGCAGGTAAAACCATTACTCAGAGAAAATTTTTATGTGACAGAACACTGTGGAGGATTCC 17784 Query 19404 ATTTTCTTCCAACTTTATGTCCATGGGCACACTGACCGACCTCGGTCAGAACCTTCTGTA 19463 || || |||||||||||||||||||| ||||| || || || || || || | || || Sbjct 17785 GTTCTCCTCCAACTTTATGTCCATGGGAACACTAACAGATCTGGGACAAAATTTGCTATA 17844 Query 19464 CTCCAACTCTGCTCACGCGTTGGACATGACCTTTGAGGTTGACGAGATGAATGAGCCCAC 19523 | || || ||||| || || |||||||| | || || || ||| | || || || Sbjct 17845 TGCAAATTCAGCTCATGCTTTAGACATGACAGTCGAAGTAGATTCAATGGAGGAACCAAC 17904 Query 19524 TCTGTTGTACG-TTTTGTTTGAAGTGTTCGACGTG-GCACGGGTCCACCAGCCTCACCGG 19581 | | | | | | | |||||||| || ||| || ||| | || || |||||||| || Sbjct 17905 T-TATCTCATGATGCTATTTGAAGTATTTGACATGTGCA-GAGTGCATCAGCCTCAACGA 17962 Query 19582 GGGGTCATTGAGGTAGTCTACCTCAGAACACCCTTCTCTGCCGGCAACGCCACTACTTAA 19641 || ||||| || || | || || ||||| ||||| || || || |||||| | || || Sbjct 17963 GGTGTCATAGAAGTTATTTATCTAAGAACCCCCTTTTCGGCAGGTAACGCCGCAACATA- 18021 Query 19642 AAAGAACATGGCGCAAGGAGGGTCCTCTGAAGAAGAGCTTCGGGCTATTAT-TCAGAACT 19700 || ||| ||| |||| || || || | ||||| || || | Sbjct 18022 ----AATATG---------GGGACCTCAGAGGACGAAATAAAACGAATTATCTCCGA--T 18066 Query 19701 TAGGCGTGGGGCCCTTTTTCTTGGGAACCTTTGATAAGAGGTTTCCTGGTTTCATCTCTT 19760 | | | || | ||| ||||| |||| |||||| | ||||| || || ||| Sbjct 18067 TTG--AATGTACCTTGTTTTTTGGGTACCTATGATAAACGCTTTCCGGGGTTTATC---- 18120 Query 19761 CTCAGAGAATGGT----CTGTGCCATTGTCAACACAGCAGGAAGAGAAACTGGAGGGGTG 19816 | | || ||| |||||||||||| ||||| | | ||| || || || Sbjct 18121 CGAAAGGACAGGTTATGCTGTGCCATTGTAAACACCGGGCTTCGCGAAGAGGGCGGTGTC 18180 Query 19817 CATTGGCTGGCCATGGCCTGGAACCCCAGAGCTAAAAAATTTTACATGTTTGATCCTTTT 19876 |||||| | || | || ||||| ||| ||||| |||||||||||||||||| || Sbjct 18181 CATTGGATTGCGTTTGCTTGGAATCCCTATATTAAAACATTTTACATGTTTGATCCATTC 18240 Query 19877 GGTTTTTCTGATCAAAAGCTTAAGCAGATCTACAGCTTTGAATATGAG 19924 || || || |||||| | | || | | |||| ||| ||||||||| Sbjct 18241 GGATTCTCGGATCAAGATTTGAAAAAAGTTTACAACTTCGAATATGAG 18288 Score = 235 bits (260), Expect = 1e-57 Identities = 509/752 (68%), Gaps = 16/752 (2%) Strand=Plus/Plus Query 5632 AATTTGGTCAGAAAATACAGtttttttGTTGTCTAACTTCGTGGCAAACGACCCATAGAG 5691 |||||| || | ||| | ||||||| || |||||| | |||||||| || || || || Sbjct 5573 AATTTGATCCGGAAACAGTATTTTTTTATTATCTAACCTGGTGGCAAAGGAACCGTACAG 5632 Query 5692 GGCGTTGGAGAGTAGCTTGGCAATGCTGCGCATGGTTTGGTTCTTGCTTTTATCTGCCAG 5751 ||||| || | || || || ||||| ||| || ||| | | |||| || || Sbjct 5633 TGCGTTTGACAACAGTTTAGCGATGCTTCGCTGTGTGCTGTTGTGGTTTTTTTCCGCGGC 5692 Query 5752 CTCTTTGGCCTGAATGTTAAGTTGC-ACATATTCTCTAGCAAGACATTTCCACTCTGGGA 5810 |||||| ||| || ||| || || || |||||||| || | || ||||||| | Sbjct 5693 CTCTTTTGCCGCTATATTA-GTGGCTACGTATTCTCTTGCCACGCAATTCCACTGCTCAA 5751 Query 5811 ATATGGTGGCTCTCTCATCGGGGACAAGGCGGACGGTCCAACCTCTGTTATGTAAAGTGA 5870 ||| || ||| |||||| ||||| | | | |||| |||| ||||| ||||| | Sbjct 5752 ATACTGTAACTCGCTCATCTGGGACCAACCTAATCTTCCATCCTCGATTATGCAAAGTAA 5811 Query 5871 TGACATCAATGGTAGTGGCAATTTCTCCTCGCAATGGCTCATTGGTCCAACAGAGCCGCC 5930 || |||| |||| ||| | ||| |||| || ||||| ||||| || || |||| Sbjct 5812 TGGCATCGATGGACGTGCATACTTCGCCTCTTAAATTTTCATTTGTCCAGCAAAGACGCC 5871 Query 5931 CGCCTTTGCGTGAGCAGAATGGGGGAAGCACATCCAAGTACTCATCCGCgggggggTCTG 5990 ||||||| | || || ||||| || | ||||| ||||| || || || |||| ||| | Sbjct 5872 CGCCTTTTCTCGAACAAAATGGCGGTAAAACATCTAAGTATTCTTCGGCAGGGGCGTCAG 5931 Query 5991 CATCGATGGTCAAGATGCCCGGGAGCAGCTCTGGGTCAAAATAGCTGATGGTTTTC---- 6046 |||| || | ||| |||| | ||| | |||||||||||| || || || Sbjct 5932 CATCAATTACAACAATGGCCGGTAACAGGGCAGGGTCAAAATAGGAAAT-TTTGTCACCG 5990 Query 6047 -TGGCTTTGCATCTTTACTTCGTAACACCTGACAGCCAGGGCCCGCTCGTAAGGATTAAG 6105 | || || | || | | | | | | || ||||| | | || | |||||||| Sbjct 5991 GTTGCAAAGCGTTTTGAATAC-TGATA---GAGAGCCAAGTTTCTGTCAAAGGGATTAAG 6046 Query 6106 AGGCGGGCCGGCGGGAAAAGGATGGGTGAGGGCGCTAGCATACATGCCACATATGTCATA 6165 || ||||| ||| | ||||| || | ||||| |||||||| || | || ||||| Sbjct 6047 TGGTGGGCCAAAGGGCATGGGATGCGTTAATGCGCTGGCATACATTCCGGAAATATCATA 6106 Query 6166 CACGTACACAGGTTGCTTTAAAATGCCTATGTAAGTGGGGTAACACCTTCCCCCTCTGAT 6225 || || | ||||| || |||| ||||||||||||||||| |||| |||||||||||| Sbjct 6107 AACATAAATAGGTTCCTCAAAAACACCTATGTAAGTGGGGTAGCACCGTCCCCCTCTGAT 6166 Query 6226 GCTGGCGCGAACATACTCATACATCTCATTAGAGGGTGCCAGCACAGTGGTGCCCATGTG 6285 ||| | | ||| | ||||| || || | || || ||||| | ||| | || || Sbjct 6167 GCTTTCTCTTACAAAATCATAAATGTCGTGTGACGGGGCCAGAAGAGTATTCGACAAATG 6226 Query 6286 GGGCTGGTCGGGCTTTTCTGCTCTGTAGAGA--ATTTGTTTAAAAATAGCATGGGAGTTG 6343 | | || ||||| | ||| || | | | ||| |||||||| ||| || || Sbjct 6227 ATGTTTTTCTAACTTTTGAG-TCT-TAAACACCAGTTGCTTAAAAATTGCAAAAGAATTT 6284 Query 6344 GAACTTATAGTGGGACGCTGGAAGACATTGAA 6375 || || || || |||||||| || ||||| || Sbjct 6285 GAGCTAATTGTTGGACGCTGAAAAACATTAAA 6316 Score = 176 bits (194), Expect = 9e-40 Identities = 432/647 (67%), Gaps = 10/647 (2%) Strand=Plus/Plus Query 3749 AAAGATATCTTTCAACAGAAGAGAGATAGCAGTGGGTAGACCCTTGGTGTAAATATTAAT 3808 |||||||||||| || | || | ||| || |||||| || || || ||| ||||||| Sbjct 3675 AAAGATATCTTTTAATAATAGGGTGATTGCTAAGGGTAGGCCTTTAGTATAAGTATTAAT 3734 Query 3809 AAAGCGGTTGAGCTGGGAGGGGTGAACCTTTGGACTGATAATGTGCATCTTAGCTTGAGT 3868 ||| | ||| ||||| | ||| || | || || || | || || ||||||||| | Sbjct 3735 AAATCTGTTTAGCTGAGCGGGTTGCATTTTGGGGCTCAGTATATGATATTTAGCTTGAAT 3794 Query 3869 TTTTAAGTTAGAAATGTTTCCTCCTTGATCTCTGCGGGGGTTCATGTTGTGCAAGACCAC 3928 ||||| | || || ||||| | | |||| | || |||||||| || || || ||||| Sbjct 3795 TTTTAGTGTGGATATATTTCCACTTAAATCTTTTCGCGGGTTCATATTATGTAATACCAC 3854 Query 3929 GATAACAGAGTAGCCTGTGCACTTGGGATACCTGTCCAGAAGTTTACTGGGGAAAGCGTG 3988 | | | |||| || ||||| |||||| | || | ||||| || || ||||| Sbjct 3855 AAACAGATAGTACCCGCTGCACGAGGGATATTTTTCAAATAGTTTTGAAGGAAACGCGTG 3914 Query 3989 GAAAAATTTGGCAACCCCTTTGTGCCCACCGAGGTCTTCCATGCACTCGTCCATGATAAT 4048 |||||||| |||| ||| ||| || | | |||||| ||||| || |||||||| Sbjct 3915 AAAAAATTTTGCAATAGGGCTGTTCCCTCCTAAATTTTCCATACACTCATCAATGATAAT 3974 Query 4049 AGCTATGGGACCCCTAGAGGCCGCCTTAGCAAAAACATTGTTGGGGTTGGTGACATCATA 4108 |||||||| || | |||||||| |||| ||| || || | | |||||| Sbjct 3975 GGCTATGGGTCCGGTTTTGGCCGCCTGTACAAATTTATTATTTGGATGCCCTAAATCATA 4034 Query 4109 GTTGACATCGCTGGTGAGGTCAGCATATGACATCTGGACGAAATTTGGA-AGAATGCTAC 4167 || | ||| | ||| || || || | || |||| ||| |||| ||| Sbjct 4035 ATTTTCTTCGTTTAAGAGATCCTTGTACGATAGTTGCGCGAATCGAGGAGTTAATG-TAC 4093 Query 4168 CGCTCTGGGGGACAA---CAGTGTTTTCTGGCCCAGCTAGATAGTTGCCCTCACAAATTT 4224 | |||| || |||| || |||| |||| | |||||| ||||| ||||| Sbjct 4094 CAGTCTGAGGCACAATTTCA--CCATTCTTTCCCATGT-TATAGTTTCCCTCTATAATTT 4150 Query 4225 GGGTTTCCCAGGCTGCAATCTCTTGAGGGGGGATCATGTCCACCTGGGGAGTAATaaaaa 4284 | | || ||| | ||| || || |||||||||||||| | | || || | ||| | Sbjct 4151 GTGCTTTCCATGACATAATTTCCTGTGGGGGGATCATGTCTGCATAAGGGGTTACAAAGA 4210 Query 4285 aaaCTGTTTCGGGGGCTGGA-ACAATAAGCTGAGCAGACATGAGGTTTCTCAGTAGTTGT 4343 | | || || ||||| ||| ||||| || | ||||| || ||||||| || ||| Sbjct 4211 ATATAGTCTCCGGGGCGGGATTTAATAATTTG-GACGACATAAGATTTCTCAATAATTGG 4269 Query 4344 GACTTTCCACACCCTGTGGGGCCATACACTACAGCAATAAAGGGTTG 4390 || ||||||| || || || ||||| | || |||| | ||||| Sbjct 4270 GATTTTCCACTACCAGTTGGACCATATATGACCCCAATCACCGGTTG 4316 Score = 127 bits (140), Expect = 4e-25 Identities = 259/385 (67%), Gaps = 0/385 (0%) Strand=Plus/Plus Query 16908 GAAGATGGCGACCCCGTCGATGCTGCCACAATGGTCTTACATGCACATTGCGGGCCAGGA 16967 ||||||||| || || |||||||| || |||||||||||| | || || || || || || Sbjct 15310 GAAGATGGCCACTCCCTCGATGCTCCCGCAATGGTCTTACTTACATATCGCAGGACAAGA 15369 Query 16968 CGCCGCGGAATACTTGTCTCCCGCCCTGGTTCAGTTTGCCCAGGCCACCAGTTCTTACTT 17027 || | ||||| || ||||| || || ||| ||||| || ||| | ||||| Sbjct 15370 TGCTTCAGAATATTTATCTCCTGCGTTGTGTCAATTTGCAAGCGCAACCGAAACGTACTT 15429 Query 17028 TAAGTTGGACAACAAATTCAGAAACCCCACTGTGGCCCCCACCCATGACGTGACCACAGA 17087 | | | | ||||| ||||| || || || || || || || || || || || || Sbjct 15430 TTCCCTAAGCGATAAATTTAGAAATCCGACGGTTGCGCCGACACACGATGTAACTACGGA 15489 Query 17088 AAGGTCACAGCGGCTGCAGCTGCGCTACGTGCCAGTCATGCAGGAGGACGGGCAGTACAC 17147 ||| || ||| | || || | | | || |||| | || || ||||| || Sbjct 15490 AAGATCGCAGAGACTACAATTAAGATTTGTTCCAGCGGAAAAAGAAGATACACAGTATAC 15549 Query 17148 TTACAAAACCCGCTTCCAGCTGGCCGTGGGGGACAACCGGGTGCTAGATATGGCCAGCAC 17207 || ||| |||| || || || |||| || || ||| | | ||||| ||| || | Sbjct 15550 TTTTAAAGCCCGATTTCAACTCACCGTCGGTGATAACAGAATATTAGATTTGGGTAGTAG 15609 Query 17208 CTACTTTGACATTAGGGGTACCCTGGACCGAGGTCCCTCTTTCAAGCCCTACAGCGGCAC 17267 || ||||| || | ||| | | ||| ||||||||||||| || || ||||| ||||| Sbjct 15610 TTATTTTGATATAAAGGGAAAGATAGACAGAGGTCCCTCTTTTAAACCTTACAGTGGCAC 15669 Query 17268 GGCCTATAATGCCTTGGCCCCCAAA 17292 || || ||| | | ||||| ||| Sbjct 15670 AGCATACAATAACCTTGCCCCGAAA 15694 Score = 89.7 bits (98), Expect = 1e-13 Identities = 200/295 (68%), Gaps = 4/295 (1%) Strand=Plus/Plus Query 5054 GTTTCACATTCAACTAACCATGTTAGCTCAGGTTTG-GCTGGGTCAAATACTAAGCTGCC 5112 || |||||||| ||||||||||||| ||| | ||| ||||| | ||| | Sbjct 4977 GTCTCACATTCTACTAACCATGTTAAGGAAGGATCATGCTCA-TCAAAGATTAAATTATT 5035 Query 5113 CCCAttttttttGAGTCTTTTCTTACCTTTGGCCTCCATGAGTCTGTACCCTTCCTCGGT 5172 | |||| ||| ||||| | ||||||||||| |||||| ||||| | |||| || || Sbjct 5036 GCTGTTTTCTTTAAGTCTATGCTTACCTTTGGTCTCCATCAGTCTATGCCCTGTTTCTGT 5095 Query 5173 GCTAAAGATGCTGTCCGTGTCCCCGTAGACAGATTTTAGAGGGC-GCTGATCCAGGGGCG 5231 || | ||||| || || ||||| | ||||||| | | || | ||| || || Sbjct 5096 CACGAACAAACTGTCAGTATCTCCGTAAATCGATTTTAAAATTCTGCGGTCCCAAGGTCG 5155 Query 5232 TGCCAGCGTCATCCTCGTAGAGAAACTGAGACCATTCTGACACAAATGCCCTGGTCCAGG 5291 | || || || || | ||| | | |||||| || || || | |||||||| Sbjct 5156 T-CCCCAATCTTCAGAATATAAAAATTCCGCCCATTCGGAAGTGAAAGCGCGGGTCCAGG 5214 Query 5292 CCAAAACAAAGGAGGCAATTTGAGAGGGGTACCTGTTATTGGCTATCAGTGGGGA 5346 | | |||||| || || ||||| || ||||| | |||||| |||| ||||||| Sbjct 5215 CGAGAACAAATGACGCGATTTGGGATGGGTAGCGGTTATTATCTATTTGTGGGGA 5269 Score = 80.6 bits (88), Expect = 5e-11 Identities = 235/356 (66%), Gaps = 17/356 (5%) Strand=Plus/Plus Query 9427 TCAAAGACATAATCATTACATGTTCTGACTAGGTACTGATAGCCAACCAGGAAGTGGGGT 9486 ||||| |||||||||||||| |||| | || ||| | || || | || || || ||| Sbjct 9305 TCAAATACATAATCATTACACTTTCTTAATATGTAATTGTATCCTAACAAAAAATGAGGT 9364 Query 9487 GGGGGATAAAGATACAAGGGCCAGCCCTGAGTGGCAGG-CTCTCTGGGGCTAAGGTTCAT 9545 || || || | ||| |||||||| || | ||| || |||||| || || | Sbjct 9365 GGTGGGTACATATATAAGGGCCAATGTAATGTTGGAGGACTTCTTGGGGCCAA-ATTTAA 9423 Query 9546 AAGCATGAGGCGGTGGTACTGGTAGATGTACTTAGACATCCAAGCTAAACCCACAGCGGT 9605 |||||| | || || | ||||| ||| |||||||||| ||||| ||||| | Sbjct 9424 AAGCATAGTTCTTTGATAATCATAGATATACGTAGACATCCATTTTAAAC---CAGCGCT 9480 Query 9606 AGTTGAGGCT-CTCGTGT--AGTCGCGGACGCGATTGAAAATGTTTCTGAGAGGTCTAAA 9662 |||| || | | ||||| ||| | | || |||| |||| | |||| ||| Sbjct 9481 AGTTATGGATGCCCGTGTCCAGTTTTGAGCATTGTTCCAAATATTTCGCTGCGGTCGAAA 9540 Query 9663 TACTTCAATGGTGTACTGGGTTTGTCCTGTGAGGCGGGCGCAGTCCAGCGCGTTCTGCAA 9722 | ||| || || | ||||||||| || || || || || |||| || ||||| || Sbjct 9541 AAGTTCCATAGTATGAACGGTTTGTCCAGTAAGTCGCGCACACTCCAATGCATTCTG-AA 9599 Query 9723 AAACAAACAAGGAGTTTTACTCCATTGCAGATGCATCCGGTACTGCGCCAGATGAA 9778 || | ||| || | || ||||||||||| ||||| || || ||||| Sbjct 9600 AAGAAGACA--------TATGACCTTTCAGATGCATCCTGTACTTCGACATATGAA 9647 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 100539705187038