Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dipodomys_20ordii_20[refseq_20GCF_5F000151885.1_202014-12-12]
65,193 sequences; 2,236,368,823 total letters
Query= NC_033423.1
Length=208501
Score E
Sequences producing significant alignments: (Bits) Value
seq165 86.0 8e-12
>seq165
Length=2883133
Score = 86.0 bits (94), Expect = 8e-12
Identities = 117/161 (73%), Gaps = 2/161 (1%)
Strand=Plus/Minus
Query 156179 GTTAGCTTCCGATTCACCCACATATTTGTTTAATAATTCAGGACCGTTAACTATTTTGAC 156238
|||||| || ||||| |||||||||||||| | | ||| || || || |||| ||||
Sbjct 2394083 GTTAGCCTCTGATTCTCCCACATATTTGTTAAGGATTTCTGGCCCATTGACTACTTTGGG 2394024
Query 156239 GGGTCGTG-ATTTAAAAGCTTGAGCGATACAGCGAGCCATTAATGTTTTACCGCACCCAG 156297
|| || |||||| | |||| | || ||||||| | |||||||| || || |
Sbjct 2394023 CTCTCTTGCATTTAACATCTTGC-CAATCTGCCGAGCCAAGAGAGTTTTACCACAACCTG 2393965
Query 156298 GAGGTCCGTATAACAATACTCCTTTTATATGTTTACAACCT 156338
| ||||| || |||| | ||||| | |||||||||||||
Sbjct 2393964 GGGGTCCATACAACAGGATGCCTTTAACATGTTTACAACCT 2393924
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 666531592081080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |