Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ellobius_20lutescens_20[genbank_20GCA_5F001685075.1_202016-07-14] 58,423 sequences; 2,353,188,398 total letters Query= NC_001731.1 Length=190289 Score E Sequences producing significant alignments: (Bits) Value seq50 219 5e-52 seq372 95.1 1e-14 >seq50 Length=628300 Score = 219 bits (242), Expect = 5e-52 Identities = 265/361 (73%), Gaps = 0/361 (0%) Strand=Plus/Plus Query 83033 TAGTAGCCGCGCGCTGGCGGGGGGAGCAGGGCCTCGATGTCGGGCTCCACGGCCAGGGTC 83092 ||| |||||| | || ||| ||||||||| || ||||| || || | | | | ||| Sbjct 301094 TAGGAGCCGCTAGGGTGCTGGGAGAGCAGGGCTTCTATGTCAGGTTCAATGTCGATGGTG 301153 Query 83093 TGGCAGCGGTGGCTGTACCTGCGCACGGGCGTGCCGTCAGCACCCACCAAGAACTTCTCG 83152 | ||||| |||||||||||||||| || |||||| ||||||| |||||||||| Sbjct 301154 CGAAAGCGGCGGCTGTACCTGCGCACTGGAACGCCGTCCCGGCCCACCAGGAACTTCTCG 301213 Query 83153 AAGTTCCAGGCCACGTCGTTGCGGCACACTGGAGACCAGGCAATGAGCTGGGGGTCGCTC 83212 ||||||||||| | |||||||||||| || |||||||| ||| || ||||||| || Sbjct 301214 AAGTTCCAGGCAATGTCGTTGCGGCATACCGGAGACCAAATGATGTACTTGGGGTCGGTC 301273 Query 83213 ACGAGCGTGCTCATGTCGTCGCTAGGCGCCGGCAGGGCCTCTCGTAGGAAGGCGAAGAGC 83272 | ||||| | ||||| || ||||| |||| | ||| || ||||||| ||||| Sbjct 301274 ATGAGCGCAGTGGGCTCGTCACTGGGCGCTGGCAAAGACTCCCGCAGGAAGGTAAAGAGT 301333 Query 83273 GGATGTGCCCTTGCACCGTTGACCTCGCACTTCTCGAAGAGCATAAAGTTCGGCTCGAAG 83332 || || || | |||| || ||||||||||||||||| | ||||||| || ||||| Sbjct 301334 GGGTGAGCTTTCTCACCATTCACCTCGCACTTCTCGAACAATGTAAAGTTGGGTTCGAAC 301393 Query 83333 CCGTTCCCAGGACGGACGTGCTTCAGGGAAGGCAAGATCTCGGCATTCTGGGCGTTTTCC 83392 || ||||| |||| | ||| |||||| || ||||| | |||| ||| || ||| Sbjct 301394 CCCCCACCAGGTCGGATATACTTGAGGGAATTCAGAATCTCTTCGTTCTTGGCATTCTCC 301453 Query 83393 T 83393 | Sbjct 301454 T 301454 >seq372 Length=389571 Score = 95.1 bits (104), Expect = 1e-14 Identities = 220/329 (67%), Gaps = 2/329 (1%) Strand=Plus/Plus Query 83068 GATGTCGGGCTCCACGGCCAGGGTCTGGCAGCGGTGGCTGTACCTGCGCACGGGCGTGCC 83127 |||||| ||||| | | | ||| ||| || | ||||||| | || | ||| || Sbjct 198713 GATGTCTGGCTCTATGTTGATGGTTTGGAAGGTGCGGCTGTAGCGACGGAATGGCTCCCC 198772 Query 83128 GTCAGCACCCACCAAGAACTTCTCGAAGTTCCAGGCCACGTCGTTGCGGCACACTGGAGA 83187 || | ||| | | ||||||||| |||||||||||||| || ||||| ||||||| Sbjct 198773 TTCTGGACCTATGAGGAACTTCTCAAAGTTCCAGGCCACATCTGAGCGGCGCACTGGACT 198832 Query 83188 CCAGGCAATGAGCTGGGGGTCGCTCACGAGCGTGCTCATGTCGTCGCTAGGCGCCGGCAG 83247 ||| ||||||| ||| || ||| ||| | | | ||| || ||| ||||| Sbjct 198833 CCACATGATGAGCTTGGGATCAGTCATGAGGGAGAACGGGTCATCATAAGGGTAGGGCAG 198892 Query 83248 GGCCTCTCGTAGGAAGGCGAAGAGCGGATGTGCCCT-TGCACCGTTGACCTCGCACTTCT 83306 ||| ||| |||| |||| ||||| | | ||| ||||||||||| ||||| | Sbjct 198893 CTTGTCTTTCAGGTAGGCAAAGACTGGATGCTCGTTCTGC-CCGTTGACCTCACACTTTT 198951 Query 83307 CGAAGAGCATAAAGTTCGGCTCGAAGCCGTTCCCAGGACGGACGTGCTTCAGGGAAGGCA 83366 | ||| | ||| | |||| | | || |||||| ||||| | ||| ||| || Sbjct 198952 GGGTAAGCCTGAAGGTGGGCTGGTACCCACCCCCAGGGCGGACATACTTGAGGCTGTTCA 199011 Query 83367 AGATCTCGGCATTCTGGGCGTTTTCCTGG 83395 |||||| | ||||| ||| |||||| Sbjct 199012 GGATCTCCTCGTTCTGACAGTTCTCCTGG 199040 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 608352203306920