Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ellobius_20lutescens_20[genbank_20GCA_5F001685075.1_202016-07-14] 58,423 sequences; 2,353,188,398 total letters Query= NC_002188.1 Length=288539 Score E Sequences producing significant alignments: (Bits) Value seq2204 87.8 3e-12 >seq2204 Length=328412 Score = 87.8 bits (96), Expect = 3e-12 Identities = 100/132 (76%), Gaps = 2/132 (2%) Strand=Plus/Minus Query 52057 GCATTTTTTGGAGCTCAGCTAAATTCTTTTATCCATGTTATTATGTACACTTATTATGGT 52116 |||||||||||||| ||| | |||||||| |||||||| || |||||| | || ||||| Sbjct 212022 GCATTTTTTGGAGCCCAGATGAATTCTTTCATCCATGTGATCATGTACTCCTACTATGGG 211963 Query 52117 ATGGCCGC-TTGTGGTCCTATGTTCAGAAAGTATCTATGGTGGAAACGTTATCTTACTAT 52175 || | || || | ||| | |||||| ||||| |||||||| || || || || || Sbjct 211962 CTGACTGCATTCGGCCCCTGGATCCAGAAA-TATCTTTGGTGGAAGCGATACCTGACCAT 211904 Query 52176 AATGCAGTTGGT 52187 ||||| |||| Sbjct 211903 GCTGCAGCTGGT 211892 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 922522600916920