Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ellobius_20lutescens_20[genbank_20GCA_5F001685075.1_202016-07-14] 58,423 sequences; 2,353,188,398 total letters Query= NC_003094.2 Length=130759 Score E Sequences producing significant alignments: (Bits) Value seq3025 82.4 6e-11 >seq3025 Length=599017 Score = 82.4 bits (90), Expect = 6e-11 Identities = 140/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 24832 ATGCAGATATTTGTTAAAACCTTAACCGGCAAAACGATAACCGTCGATGTCGAATCGAGC 24891 |||||||| || || ||||||||||| || || || || ||| | || ||||| | ||| Sbjct 118135 ATGCAGATCTTCGTGAAAACCTTAACTGGTAAGACCATCACCCTGGAGGTCGAGCCCAGC 118076 Query 24892 GACAGTGTAGAAACTGTTAAGGAAAAAATTGCTGCAAAAGAAGGCGTACCGGTTGACCAG 24951 |||| | || | || |||| || || | || |||||| | || ||||||| Sbjct 118075 GACACCATCGAGAACGTCAAGGCCAAGATCCAGGACAAGGAAGGCATCCCCCCTGACCAG 118016 Query 24952 CAACGTTTAATATATGCGGGCAAACAACTGGAAGATTCCATGACTATGAACGATTACAGC 25011 || | | || | ||| ||||| || ||||| ||| | || || ||| |||| | Sbjct 118015 CAGAGGCTGATCTTTGCAGGCAAGCAGCTGGAGGATGGCCGCACCCTGTCCGACTACAAC 117956 Query 25012 ATACAGAAAGAGGCCACGCTTCA 25034 || ||||||||| |||| || || Sbjct 117955 ATCCAGAAAGAGTCCACCCTGCA 117933 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 418006154872160