Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ellobius_20lutescens_20[genbank_20GCA_5F001685075.1_202016-07-14] 58,423 sequences; 2,353,188,398 total letters Query= NC_003529.1 Length=155060 Score E Sequences producing significant alignments: (Bits) Value seq248 95.1 1e-14 >seq248 Length=567972 Score = 95.1 bits (104), Expect = 1e-14 Identities = 162/234 (69%), Gaps = 6/234 (3%) Strand=Plus/Plus Query 139534 ATGGCCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATC 139593 || ||| |||| | ||| | || | ||| | || |||||||| | || || ||||| Sbjct 1452 ATAGCCACCTCTGAGACGGAGGACCAGGTGCAGGGTGGACTCTTTCTAGATATTGTAATC 1511 Query 139594 GCTCATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGG 139653 | | |||| ||||| ||||| || |||||| |||| || |||||||| ||| Sbjct 1512 GGAGAGAGTGCAATCATCTTCCAGCTGCTTGCCAGCAAAGATGAG---TTGCTGATGGGG 1568 Query 139654 AGGT---ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGG 139710 ||| ||||| |||||||| ||| || || | | || | ||||| |||| Sbjct 1569 GGGTGGAATGCCCTCTTTGTCCAGGATCTTCACCTTCACATTCTCGATGGTGTCACTGGG 1628 Query 139711 CTCCACCTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 ||||||||| | ||| | ||||||||||| | || || ||||| |||||||| Sbjct 1629 CTCCACCTCCAGGGTGATGGTCTTGCCGGTTAGGGTCTTCACGAAGATTTGCAT 1682 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 495701730661600