Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ellobius_20lutescens_20[genbank_20GCA_5F001685075.1_202016-07-14] 58,423 sequences; 2,353,188,398 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq4138 100 3e-16 seq137 100 3e-16 >seq4138 Length=267950 Score = 100 bits (110), Expect = 3e-16 Identities = 124/167 (74%), Gaps = 2/167 (1%) Strand=Plus/Plus Query 93081 TGTACATTAAGCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAA-CTCATTG 93139 || |||| | ||| |||||| | ||||||| || |||| || || || ||| ||| Sbjct 162861 TGAACATCAGGCAGGCAAAGACACAGGGTAAACCCTCATCTC-TGCTAATAAGCTCGTTG 162919 Query 93140 CTGAATGTTAAACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTA 93199 ||||| | || || | |||||| |||||||||||||| |||||||| |||||| Sbjct 162920 GAAAATGTAAGGCCAGGCATCAGTCCCCGTTTCTTGAGCCAGAATATTGATGCAAAAGAG 162979 Query 93200 CCAGaaaaaaaTATACCTTCCACGGCTGCAAATGCCACAATACGTTC 93246 ||||| || || || ||||| || || ||||| ||||||| ||||| Sbjct 162980 CCAGAGAAGAAGATCCCTTCTACAGCAGCAAAGGCCACAACTCGTTC 163026 >seq137 Length=869495 Score = 100 bits (110), Expect = 3e-16 Identities = 160/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 93476 ACGAGATTTTCATTGACTATACCATCGGATGCTGCaaaaaaaGCCAATATATGCTTTATA 93535 || ||||||||||||||||| ||||| || ||||| ||||||| | || |||| Sbjct 369128 ACCAGATTTTCATTGACTATGCCATCACTCGCCGCAAAGAAAGCCAGGACGTGAGATATA 369187 Query 93536 AAATGTTTCTCATCATCTTTAAGCTTATCCCAATCGGATAGATCTTTTGAAAGATCGACT 93595 |||||| |||| || ||| ||| ||||| | | ||| || || || || || Sbjct 369188 AAATGTCTCTCGTCGGGTTTCAGCGCTTCCCAGTGTTGAATATCCTTGGAGAGGTCCACC 369247 Query 93596 TCTTCGACAGTCCAAAACGATGCTTCTGCTTTTTTGTACATATCCCATATGTCTTGATAT 93655 || || | ||||| || || || || ||||| |||||||| | ||| || || || ||| Sbjct 369248 TCCTCAGCCGTCCAGAAGGAGGCCTCGGCTTTCTTGTACATCTGCCAGATATCATGGTAT 369307 Query 93656 TGAATTGGAAATATGACAAAACGATTAGGGTTATCTTTTAGTAACGGCTC 93705 | || ||||| | || || || || || ||| | ||||| ||||| Sbjct 369308 TCGATGGGAAAAACCACGAAGCGGCGGGGATTTTCTCTCAGTAAGGGCTC 369357 Score = 89.7 bits (98), Expect = 6e-13 Identities = 82/104 (79%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 93143 AATGTTAAACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCA 93202 ||||| | || || | |||||| |||||||||||||| |||||||| |||||| ||| Sbjct 366614 AATGTAAGGCCAGGCATCAGTCCCCGTTTCTTGAGCCAGAATATTGATGCAAAAGAGCCA 366673 Query 93203 GaaaaaaaTATACCTTCCACGGCTGCAAATGCCACAATACGTTC 93246 || || || || ||||| || || ||||| ||||||| ||||| Sbjct 366674 GAGAAGAAGATCCCTTCTACAGCAGCAAAGGCCACAACTCGTTC 366717 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556454131518520