Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ellobius_20lutescens_20[genbank_20GCA_5F001685075.1_202016-07-14] 58,423 sequences; 2,353,188,398 total letters Query= NC_009011.2 Length=131331 Score E Sequences producing significant alignments: (Bits) Value seq2959 89.7 4e-13 seq3071 84.2 2e-11 >seq2959 Length=310600 Score = 89.7 bits (98), Expect = 4e-13 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245 || || ||||| || ||||||||||| | ||| || |||||| || || || ||| Sbjct 279647 GTGGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCTTCCAGCTGCTTGCCA 279706 Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305 || ||||||| ||||| ||||| || || ||||| ||||| || ||||| || Sbjct 279707 GCAAAGATGAGTCGCTGCTGGTCGGGGGGGATGCCCTCTTTATCCTGGATCTTGGCCTTC 279766 Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365 | | || | |||||| ||| ||||| |||| ||| | || ||||| |||| || Sbjct 279767 ACGTTCTCGATGGTGTCACTGGGCTCGACCTCCAGGGTGATGGTCTTGCCCGTCAAGGTC 279826 Query 114366 TTTACAAAAATCTGCAT 114382 || || || || ||||| Sbjct 279827 TTCACGAAGATTTGCAT 279843 >seq3071 Length=285302 Score = 84.2 bits (92), Expect = 2e-11 Identities = 153/224 (68%), Gaps = 0/224 (0%) Strand=Plus/Plus Query 114159 CCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTCATA 114218 ||||| |||||||| || | ||| | | || || ||||| |||||||| || || | Sbjct 253157 CCACGAAGTCTCAACACCAGATGAAGGATGGACTCCTTTTGGATGTTGTAGTCAGACAAA 253216 Query 114219 GTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATG 114278 ||| | |||||| || || || ||||| |||| || ||| || || |||||||| Sbjct 253217 GTATGGCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCTTCTGCTGATCAGGAGGAATT 253276 Query 114279 CCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACGTCC 114338 ||||| || || ||||| || | | ||| | ||||| | || ||| || || Sbjct 253277 CCTTCCTTATCCTGGATCTTGGCCTTGACATTTTCTATAGTGTCTGAGGGTTCTACCTCA 253336 Query 114339 ACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 | || | ||||| || || || || || | ||||||||||| Sbjct 253337 AGCGTGATGGTTTTCCCCGTAAGGGTCTTCATGAAAATCTGCAT 253380 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419835251571876