Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ellobius_20lutescens_20[genbank_20GCA_5F001685075.1_202016-07-14] 58,423 sequences; 2,353,188,398 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq4138 86.0 6e-12 >seq4138 Length=267950 Score = 86.0 bits (94), Expect = 6e-12 Identities = 149/212 (70%), Gaps = 6/212 (3%) Strand=Plus/Minus Query 52633 AGGAGTTTTTTACGGCCGCGCTGCCGGTCGAGCTGCTGGGCATGAACGCGCAGTCC-ATG 52691 |||||||| | |||| || ||||| || | || | || |||||| ||| | ||| Sbjct 162794 AGGAGTTTCTCACGGAGGCCCTGCCTGTGAATCTCATCGGGATGAACT-GCACCCTGATG 162736 Query 52692 TGCGAGTACATCGAGTTTGTGGCGGATCGTCTGTTGGTGCAGCTCGGG--CAGCCAAAGT 52749 |||||||||| || ||| |||| | || || || |||| ||| |||| | | | Sbjct 162735 AAGCAGTACATCGAATTCGTGCCGGACAGGCTTATGCTGGAGCTAGGGTTCAGCAAGATT 162676 Query 52750 ACTTCAACGCTCGCAATCCGTTTGAGTTTATGAACAACATTTCGCTTGAGGGCAAGACCA 52809 ||||| | ||||||||||| | ||| | || ||||| | || || ||||| | Sbjct 162675 --TTCAAAGTAGAAAATCCGTTTGACCTCATGGAAAATATTTCATTAGAAGGGAAGACAA 162618 Query 52810 ACTTTTTCGAGAAGCGAGTCGGCGAGTATAAG 52841 |||| || ||||||||||| ||||||||| || Sbjct 162617 ACTTCTTTGAGAAGCGAGTGGGCGAGTATCAG 162586 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 495899985772560