Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ellobius_20lutescens_20[genbank_20GCA_5F001685075.1_202016-07-14] 58,423 sequences; 2,353,188,398 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq1738 96.9 3e-15 seq248 89.7 5e-13 >seq1738 Length=291085 Score = 96.9 bits (106), Expect = 3e-15 Identities = 148/211 (70%), Gaps = 0/211 (0%) Strand=Plus/Minus Query 126904 CACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTC 126963 ||||| || | || ||||||||||| |||||||| || || || || ||| || Sbjct 20107 CACCAGGTGCAAAGTGGACTCTTTTTGGATATTGTAGACGGACAGGGTCCGGCCATCCTC 20048 Query 126964 TAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGT 127023 ||||| || ||||| | |||| | |||||| || || || ||||| |||||||| Sbjct 20047 CAGCTGCTTGCCAGCAAATATCAGCCTCTGCTGGTCAGGTGGGATGCCTTCCTTGTCTTG 19988 Query 127024 GATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTT 127083 ||| || ||||| | |||| |||||| | |||||| || | || | || || Sbjct 19987 GATCTTGGCCTTGACATTCTCGATGGTGTCACTGGGCTCGACCTCAAGAGTGATGGTCTT 19928 Query 127084 GCCGGTCAGAGTTTTTACAAAAATCTGCATG 127114 ||| |||| || || ||||| ||||||||| Sbjct 19927 GCCCATCAGGGTCTTCACAAAGATCTGCATG 19897 >seq248 Length=567972 Score = 89.7 bits (98), Expect = 5e-13 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || |||||||| | |||||||||||| | |||| | ||| || ||||| || ||| Sbjct 1486 GTGGACTCTTTCTAGATATTGTAATCGGAGAGAGTGCAATCATCTTCCAGCTGCTTGCCA 1545 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 || |||| | | |||| || ||| || |||||||| |||||| ||| ||| ||| Sbjct 1546 GCAAAGATGAGTTGCTGATGGGGGGGTGGAATGCCCTCTTTGTCCAGGATCTTCACCTTC 1605 Query 127037 AGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTT 127096 | | |||| |||||| | ||| || || | ||| | || |||||||| || || Sbjct 1606 ACATTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTGCCGGTTAGGGTC 1665 Query 127097 TTTACAAAAATCTGCAT 127113 || || || || ||||| Sbjct 1666 TTCACGAAGATTTGCAT 1682 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475153547709520