Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ellobius_20lutescens_20[genbank_20GCA_5F001685075.1_202016-07-14] 58,423 sequences; 2,353,188,398 total letters Query= NC_018504.1 Length=123876 Score E Sequences producing significant alignments: (Bits) Value seq248 95.1 1e-14 seq22505 87.8 1e-12 seq5999 87.8 1e-12 >seq248 Length=567972 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 || ||||| | ||| | || | || ||||| || ||||| | ||||||||||||| | Sbjct 1456 CCACCTCTGAGACGGAGGACCAGGTGCAGGGTGGACTCTTTCTAGATATTGTAATCGGAG 1515 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362 | ||| | |||| |||| ||||| || ||||| || | |||| || ||| ||| Sbjct 1516 AGAGTGCAATCATCTTCCAGCTGCTTGCCAGCAAAGATGAGTTGCTGATGGGGGGGTGGA 1575 Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422 ||||| ||||| || | || || || ||| | || | |||||| | ||||| Sbjct 1576 ATGCCCTCTTTGTCCAGGATCTTCACCTTCACATTCTCGATGGTGTCACTGGGCTCCACC 1635 Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 || || |||| || |||||||||| || || || || || ||||| Sbjct 1636 TCCAGGGTGATGGTCTTGCCGGTTAGGGTCTTCACGAAGATTTGCAT 1682 >seq22505 Length=6242 Score = 87.8 bits (96), Expect = 1e-12 Identities = 138/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 101273 GTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGCTTACCT 101332 || || ||||| || || |||||||||| | || | | |||| |||| ||||| || Sbjct 3211 GTGGACTCTTTCTGGATGTTGTAATCGGACAGGGTCCGGCCATCCTCCAGCTGCTTGCCG 3270 Query 101333 GCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTT 101392 |||||||||| | ||| || || || || |||||||| || ||||| || || || Sbjct 3271 GCAAATATCAGCCTCTGATGGTCAGGTGGGATGCCTTCCTTGTCTTGGATCTTGGCCTTG 3330 Query 101393 ACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTTAAAGTT 101452 | | | | | || ||| | | || |||||||||| || ||||| | | || Sbjct 3331 AAATTCTTGATGGTATCACTGGGCTAGACCTCAAGAGTGATGGTCTTGCCCATCAGGGTC 3390 Query 101453 TTTACAAATATCTGCATG 101470 || ||||||||||||||| Sbjct 3391 TTCACAAATATCTGCATG 3408 >seq5999 Length=119422 Score = 87.8 bits (96), Expect = 1e-12 Identities = 138/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 101273 GTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGCTTACCT 101332 || || ||||| || || |||||||||| | || | | |||| |||| ||||| || Sbjct 3032 GTGGACTCTTTCTGGATGTTGTAATCGGACAGGGTCCGGCCATCCTCCAGCTGCTTGCCG 2973 Query 101333 GCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTT 101392 |||||||||| | ||| || || || || |||||||| || ||||| || || || Sbjct 2972 GCAAATATCAGCCTCTGATGGTCAGGTGGGATGCCTTCCTTGTCTTGGATCTTGGCCTTG 2913 Query 101393 ACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTTAAAGTT 101452 | | | | | || ||| | | || |||||||||| || ||||| | | || Sbjct 2912 AAATTCTTGATGGTATCACTGGGCTAGACCTCAAGAGTGATGGTCTTGCCCATCAGGGTC 2853 Query 101453 TTTACAAATATCTGCATG 101470 || ||||||||||||||| Sbjct 2852 TTCACAAATATCTGCATG 2835 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 395996237767011