Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ellobius_20lutescens_20[genbank_20GCA_5F001685075.1_202016-07-14] 58,423 sequences; 2,353,188,398 total letters Query= NC_019559.1 Length=202946 Score E Sequences producing significant alignments: (Bits) Value seq7195 159 4e-34 seq8882 91.5 2e-13 >seq7195 Length=137916 Score = 159 bits (176), Expect = 4e-34 Identities = 197/267 (74%), Gaps = 2/267 (1%) Strand=Plus/Minus Query 153745 CCCGCGTCCCTCAGATGCTCGTTGAAAACTA-CACAAGAACCTTTAATTGTAACGTGGCA 153803 || || ||| | ||||| || ||||| ||| | || ||||| || ||||| || ||||| Sbjct 44027 CCTGCATCCTTAAGATGTTCTCTGAAA-CTATCCCAGGAACCCTTGATTGTGACATGGCA 43969 Query 153804 AAAGAAGAAAGCTGTAGGTCCAGAAAATATGGCCACGTATAGCAAAGCCCACGGTGTAGT 153863 || |||||||||||| | |||||||| |||| ||| || ||||||||||| || || || Sbjct 43968 GAAAAAGAAAGCTGTAAGCCCAGAAAACATGGTCACTTACAGCAAAGCCCATGGAGTTGT 43909 Query 153864 GCTTCAGCCCACATATAAAGATAGAATTAATATAACCGAATTAGGTCTTTTAAACAGTAG 153923 | ||||| |||||| ||| || | || || || || | || || | |||| || Sbjct 43908 AGTCCAGCCTGCATATAGAGACAGGGTAAACATCACTGAGCTGGGACTCTGGAACACAAG 43849 Query 153924 TATAACGTTTTGGAATGCAACACTGGATGATGAAGGCTGTTATATGTGTCTGTTTAATAT 153983 || || || ||||| |||| ||||| ||||| ||||| || |||||||| || |||| Sbjct 43848 CATCACCTTCTGGAACACAACCCTGGACGATGAGGGCTGCTACATGTGTCTCTTCAATAC 43789 Query 153984 GTTCGGTTCTGGTAAGGTATCGGGAAC 154010 || | |||||| ||| | || || || Sbjct 43788 ATTTGTTTCTGGGAAGATCTCAGGGAC 43762 >seq8882 Length=60015 Score = 91.5 bits (100), Expect = 2e-13 Identities = 89/115 (77%), Gaps = 0/115 (0%) Strand=Plus/Minus Query 2656 AGAATTTCTTAAGCAGATACAAAGGAAATTTCGATTACTGGATCGGCATACACAGAGAAT 2715 |||||||| ||| |||||||||||| | || || |||||||||||| | |||||| ||| Sbjct 56487 AGAATTTCATAAACAGATACAAAGGGACCTTTGACTACTGGATCGGCCTGCACAGAAAAT 56428 Query 2716 CATCAGAACATCCGTGGAAATGGGCGGATAATACCACATACAACTACTCGTAAGT 2770 ||||| | || || |||| ||| ||| || || |||| ||| |||||| || Sbjct 56427 CATCAAAGCACCCTTGGAGGTGGATGGACAACACGGCATATAACAGCTCGTATGT 56373 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 648825024910480