Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ellobius_20lutescens_20[genbank_20GCA_5F001685075.1_202016-07-14] 58,423 sequences; 2,353,188,398 total letters Query= NC_021249.1 Length=282895 Score E Sequences producing significant alignments: (Bits) Value seq4728 84.2 4e-11 >seq4728 Length=151395 Score = 84.2 bits (92), Expect = 4e-11 Identities = 116/160 (73%), Gaps = 2/160 (1%) Strand=Plus/Minus Query 171915 TCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTA 171974 || |||| |||||||||||||||||| | ||||| || ||||| | | || ||| ||| Sbjct 107877 TCTTCCAGTTGTTTACCAGCAAAAATCAGCCTCTGCTGATCAGGAAGAAATCTTTCCTTA 107818 Query 171975 TCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAATG 172034 || || || || |||||||| |||||| | ||| | ||| ||||| || || ||| Sbjct 107817 TCCTGGATATTGGCCTTTACATTTTCTATAGTGTTTGAGGGTTCAACTTCAAGTGTGATG 107758 Query 172035 GTTTT-ACCAGTTAATGTTTTAAT-GAATATCTGCATTTT 172072 |||| || || | || || || || |||||||| || Sbjct 107757 TTTTTCCCCCGTCAGGGTCTTCATAAAAAATCTGCATCTT 107718 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 904474990493400