Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ellobius_20lutescens_20[genbank_20GCA_5F001685075.1_202016-07-14] 58,423 sequences; 2,353,188,398 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq3025 145 7e-30 seq1738 127 2e-24 seq5338 122 8e-23 seq2959 122 8e-23 seq22505 118 1e-21 seq5999 118 1e-21 seq248 118 1e-21 seq17328 105 6e-18 seq8984 91.5 1e-13 seq3071 87.8 2e-12 seq14192 84.2 2e-11 seq5954 82.4 7e-11 >seq3025 Length=599017 Score = 145 bits (160), Expect = 7e-30 Identities = 153/199 (77%), Gaps = 2/199 (1%) Strand=Plus/Plus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521 ||||||||||||||| || ||||| ||| || ||| | | | ||||| |||||||||| Sbjct 117938 GGTGGACTCTTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCA-TCCTCCAGCTGCTTGC 117996 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 | || | || |||| ||||||||| || ||||||||||||||||| |||||| || Sbjct 117997 CTGCAAAGATCAGCCTCTGCTGGTCAGGGGGGATGCCTTCCTTGTCCTGGATCTTGGCCT 118056 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 ||| | ||| | |||||| ||||||| || || | ||||| ||| || || || | | Sbjct 118057 TGACGTTCTCGATGGTGTCGCTGGGCTCGACCTCCAGGGTGATGGTCTTACCAGTTAAGG 118116 Query 133642 TTTTTACGAAAATCTGCAT 133660 |||| ||||| |||||||| Sbjct 118117 TTTTCACGAAGATCTGCAT 118135 Score = 122 bits (134), Expect = 8e-23 Identities = 130/169 (77%), Gaps = 2/169 (1%) Strand=Plus/Plus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521 ||||||||||||||| || ||||| ||| || ||| | | | ||||| |||||||||| Sbjct 115680 GGTGGACTCTTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCA-TCCTCCAGCTGCTTGC 115738 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 | || | || |||| ||||||||| || ||||||||||||||||| |||||| || Sbjct 115739 CTGCAAAGATCAGCCTCTGCTGGTCAGGGGGGATGCCTTCCTTGTCCTGGATCTTGGCCT 115798 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTT 133630 ||| | ||| | |||||| ||||||| || || | ||||| ||| || Sbjct 115799 TGACGTTCTCGATGGTGTCGCTGGGCTCGACCTCCAGGGTGATGGTCTT 115847 >seq1738 Length=291085 Score = 127 bits (140), Expect = 2e-24 Identities = 149/199 (75%), Gaps = 2/199 (1%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 ||||||||||| || |||||||| || || || | | | ||||| ||||||||||| Sbjct 20094 GTGGACTCTTTTTGGATATTGTAGACGGACAGGGTCCGGCCA-TCCTCCAGCTGCTTGCC 20036 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 || | || |||| ||||||||| || ||||||||||||||||| |||||| ||| Sbjct 20035 AGCAAATATCAGCCTCTGCTGGTCAGGTGGGATGCCTTCCTTGTCTTGGATCTTGGCCTT 19976 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 || | ||| | ||||| ||||||| || || | |||| ||| ||||| |||| || Sbjct 19975 GACATTCTCGATGGTGTCACTGGGCTCGACCTCAAGAGTGATGGTCTTGCCCATCAGGGT 19916 Query 133643 TTTTACGAAAATCTGCATG 133661 || || || ||||||||| Sbjct 19915 CTTCACAAAGATCTGCATG 19897 >seq5338 Length=92157 Score = 122 bits (134), Expect = 8e-23 Identities = 148/199 (74%), Gaps = 2/199 (1%) Strand=Plus/Plus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521 ||||||||||||||| || |||||||| | ||| | | | || || |||||||||| Sbjct 52172 GGTGGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCA-TCTTCCAGCTGCTTGC 52230 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 | || | ||||| |||||||||||||| |||||||| || || || |||||| || Sbjct 52231 CAGCAAAGATGAGTCGCTGCTGGTCGGGGGGGATGCCCTCTTTATCCTGGATCTTGGCCT 52290 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 | | | ||| | ||||| | ||| |||| || | ||||| |||||||| |||||| | Sbjct 52291 TCACGTTCTCGATGGTGTCACTCGGCGCCACCTCCAGGGTGATGGTTTTGCTGGTCAGGG 52350 Query 133642 TTTTTACGAAAATCTGCAT 133660 | || | ||| || ||||| Sbjct 52351 TCTTCATGAAGATTTGCAT 52369 >seq2959 Length=310600 Score = 122 bits (134), Expect = 8e-23 Identities = 148/199 (74%), Gaps = 2/199 (1%) Strand=Plus/Plus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521 ||||||||||||||| || |||||||| | ||| | | | || || |||||||||| Sbjct 279646 GGTGGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCA-TCTTCCAGCTGCTTGC 279704 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 | || | ||||| |||||||||||||| |||||||| || || || |||||| || Sbjct 279705 CAGCAAAGATGAGTCGCTGCTGGTCGGGGGGGATGCCCTCTTTATCCTGGATCTTGGCCT 279764 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 | | | ||| | ||||| ||||||| || || | ||||| ||| ||||| |||| | Sbjct 279765 TCACGTTCTCGATGGTGTCACTGGGCTCGACCTCCAGGGTGATGGTCTTGCCCGTCAAGG 279824 Query 133642 TTTTTACGAAAATCTGCAT 133660 | || ||||| || ||||| Sbjct 279825 TCTTCACGAAGATTTGCAT 279843 >seq22505 Length=6242 Score = 118 bits (130), Expect = 1e-21 Identities = 147/199 (74%), Gaps = 2/199 (1%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 |||||||||||||| || ||||||||| || || | | | ||||| ||||||||||| Sbjct 3211 GTGGACTCTTTCTGGATGTTGTAATCGGACAGGGTCCGGCCA-TCCTCCAGCTGCTTGCC 3269 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 || | || |||| ||| ||||| || ||||||||||||||||| |||||| ||| Sbjct 3270 GGCAAATATCAGCCTCTGATGGTCAGGTGGGATGCCTTCCTTGTCTTGGATCTTGGCCTT 3329 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 || | || | || || |||||| || || | |||| ||| ||||| |||| || Sbjct 3330 GAAATTCTTGATGGTATCACTGGGCTAGACCTCAAGAGTGATGGTCTTGCCCATCAGGGT 3389 Query 133643 TTTTACGAAAATCTGCATG 133661 || || || ||||||||| Sbjct 3390 CTTCACAAATATCTGCATG 3408 >seq5999 Length=119422 Score = 118 bits (130), Expect = 1e-21 Identities = 147/199 (74%), Gaps = 2/199 (1%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 |||||||||||||| || ||||||||| || || | | | ||||| ||||||||||| Sbjct 3032 GTGGACTCTTTCTGGATGTTGTAATCGGACAGGGTCCGGCCA-TCCTCCAGCTGCTTGCC 2974 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 || | || |||| ||| ||||| || ||||||||||||||||| |||||| ||| Sbjct 2973 GGCAAATATCAGCCTCTGATGGTCAGGTGGGATGCCTTCCTTGTCTTGGATCTTGGCCTT 2914 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 || | || | || || |||||| || || | |||| ||| ||||| |||| || Sbjct 2913 GAAATTCTTGATGGTATCACTGGGCTAGACCTCAAGAGTGATGGTCTTGCCCATCAGGGT 2854 Query 133643 TTTTACGAAAATCTGCATG 133661 || || || ||||||||| Sbjct 2853 CTTCACAAATATCTGCATG 2835 >seq248 Length=567972 Score = 118 bits (130), Expect = 1e-21 Identities = 145/198 (73%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCC 133522 |||||||||||||| |||||||||||| | ||| | || || ||||||||||| Sbjct 1485 GGTGGACTCTTTCTAGATATTGTAATCGGAGAGAGTGCAATCATCTTCCAGCTGCTTGCC 1544 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 || | ||||| |||| ||| ||| || ||||| || ||||| |||||| ||| Sbjct 1545 AGCAAAGATGAGTTGCTGATGGGGGGGTGGAATGCCCTCTTTGTCCAGGATCTTCACCTT 1604 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 | | ||| | ||||| |||||||||| || | ||||| ||| |||||||| || || Sbjct 1605 CACATTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTGCCGGTTAGGGT 1664 Query 133643 TTTTACGAAAATCTGCAT 133660 || ||||| || ||||| Sbjct 1665 CTTCACGAAGATTTGCAT 1682 >seq17328 Length=23406 Score = 105 bits (116), Expect = 6e-18 Identities = 146/201 (73%), Gaps = 5/201 (2%) Strand=Plus/Plus Query 133465 TGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCCC 133523 ||||||||||||| || ||||| | | || || | | | ||||| ||||||||||| Sbjct 1412 TGGACTCTTTCTGGATGTTGTAGTAGGACAGAGTCCGGCCA-TCCTCTAGCTGCTTGCCA 1470 Query 133524 GCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTG 133583 || | || || | |||||||| || ||||| |||||||||| |||||| |||| Sbjct 1471 GCAAATATCAGTCTCTGCTGGTGAGGTAGGATGGCTTCCTTGTCTTGGATCTTGGCCTTG 1530 Query 133584 AGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGA---CGGTGACGGTTTTGCCGGTCAGA 133640 | | ||||| ||||| |||||| || || | | ||| | | ||||| |||||| Sbjct 1531 ATGTTCTCAATGGTGTCACTGGGCTGGACCTCAAGAGTGATGATGATGTTGCCTGTCAGA 1590 Query 133641 GTTTTTACGAAAATCTGCATG 133661 ||||| || || ||||||||| Sbjct 1591 GTTTTCACAAAGATCTGCATG 1611 >seq8984 Length=72256 Score = 91.5 bits (100), Expect = 1e-13 Identities = 90/114 (79%), Gaps = 2/114 (2%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 |||||||||||||| || ||||| ||| || || | | | ||||| ||||||||||| Sbjct 54593 GTGGACTCTTTCTGGATGTTGTAGTCGGACAGGGTCCGGCCA-TCCTCCAGCTGCTTGCC 54535 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTT 133576 || | || |||| ||||||||| || ||||||||||||||||| |||||| Sbjct 54534 GGCAAATATCAGCCTCTGCTGGTCAGGTGGGATGCCTTCCTTGTCTTGGATCTT 54481 >seq3071 Length=285302 Score = 87.8 bits (96), Expect = 2e-12 Identities = 144/205 (70%), Gaps = 2/205 (1%) Strand=Plus/Plus Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCT 133515 ||| | | ||||||| || || || ||||| || || || | | | || || |||| Sbjct 253177 ATGAAGGATGGACTCCTTTTGGATGTTGTAGTCAGACAAAGTATGGCCA-TCTTCCAGCT 253235 Query 133516 GCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCT 133575 ||||||| || | || ||| |||||| || ||||| || |||||||| || ||||| Sbjct 253236 GCTTGCCAGCAAAGATCAGCTTCTGCTGATCAGGAGGAATTCCTTCCTTATCCTGGATCT 253295 Query 133576 TTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGG 133635 | ||||| | || | ||||| | ||| || || || | |||| |||||| || | Sbjct 253296 TGGCCTTGACATTTTCTATAGTGTCTGAGGGTTCTACCTCAAGCGTGATGGTTTTCCCCG 253355 Query 133636 TCAGAGTTTTTACGAAAATCTGCAT 133660 | || || || | |||||||||||| Sbjct 253356 TAAGGGTCTTCATGAAAATCTGCAT 253380 >seq14192 Length=18816 Score = 84.2 bits (92), Expect = 2e-11 Identities = 140/200 (70%), Gaps = 3/200 (2%) Strand=Plus/Plus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCC 133522 ||||||||||||||| || ||||| || || ||| | || || | ||||||||| Sbjct 10483 GGTGGACTCTTTCTGGATCTTGTAGTCAGACAGGGTGCAGACATCTTCCAACTGCTTGCC 10542 Query 133523 CGCGTAAATGAGCCGCTGCTGGTC--GGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGC 133580 || | || || ||||||||| ||| || ||||| | ||||| |||||| | Sbjct 10543 AGCAAAGAT-TTCCTCTGCTGGTCAGGGGGGGAATGCCCTTTTTGTCATGAATCTTTGCC 10601 Query 133581 TTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGA 133640 |||| || ||||| |||| |||| || || || | ||| | ||| ||||| ||||| Sbjct 10602 TTGACCTTCTCAATGATGTCTCTGGGTTCAACCTCCAGGGTAATGGTCTTGCCTGTCAGG 10661 Query 133641 GTTTTTACGAAAATCTGCAT 133660 || | | || |||||||| Sbjct 10662 GTCTGCATAAAGATCTGCAT 10681 >seq5954 Length=158713 Score = 82.4 bits (90), Expect = 7e-11 Identities = 137/198 (69%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCC 133522 ||||||||| | || || ||||| || || || | || || ||||||||||| Sbjct 21649 GGTGGACTCCTCTTGGATGTTGTAGTCAGGCAAAGTACAGCCATCTTCCAGCTGCTTGCC 21590 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 | | | || |||| |||| | || |||| || ||| |||| || |||||| ||| Sbjct 21589 AGGGAAGATCAGCCTCTGCAGATCAGGAGAAATTCCTCCCTTATCCTGGATCTTGGCCTT 21530 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 || | || | ||||| |||||| || |||| |||| |||||| || | || || Sbjct 21529 GACATTTTCTATAGTGTCTAAGGGCTCAACCTCGAGCGTGATGGTTTTCCCTGGAAGGGT 21470 Query 133643 TTTTACGAAAATCTGCAT 133660 || |||||||||||||| Sbjct 21469 CTTCACGAAAATCTGCAT 21452 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483067763832520