Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ellobius_20lutescens_20[genbank_20GCA_5F001685075.1_202016-07-14] 58,423 sequences; 2,353,188,398 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq3071 96.9 8e-15 seq22505 95.1 3e-14 seq5999 95.1 3e-14 seq5954 93.3 1e-13 seq650 89.7 1e-12 seq8984 86.0 1e-11 seq5338 84.2 5e-11 >seq3071 Length=285302 Score = 96.9 bits (106), Expect = 8e-15 Identities = 145/206 (70%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 || || || || || ||||| ||||| | || || ||| || ||||| | ||| Sbjct 253365 AAGACCCTTACGGGGAAAACCATCACGCTTGAGGTAGAACCCTCAGACACTATAGAAAAT 253306 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 || ||| ||||| || || || ||||||||| || || || | || ||||| Sbjct 253305 GTCAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGATCAGCAGAAGCTGATCTTT 253246 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 || || |||||| |||||||||| |||||| | || |||||| |||| || ||||| Sbjct 253245 GCTGGCAAGCAGCTGGAAGATGGCCATACTTTGTCTGACTACAACATCCAAAAGGAGTCC 253186 Query 206365 ACTCTTCACCTTGTTTTGAGACTTCG 206390 | ||||| || || ||||||||||| Sbjct 253185 ATCCTTCATCTGGTGTTGAGACTTCG 253160 Score = 84.2 bits (92), Expect = 5e-11 Identities = 76/96 (79%), Gaps = 0/96 (0%) Strand=Plus/Plus Query 204752 CGAAGTCTCAAAACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTC 204811 ||||||||||| || || ||||| | ||||| || |||| || ||||||| |||||| Sbjct 253160 CGAAGTCTCAACACCAGATGAAGGATGGACTCCTTTTGGATGTTGTAGTCAGACAAAGTA 253219 Query 204812 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATAAGC 204847 ||||||||||||||||| || || ||||| ||| Sbjct 253220 TGGCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGC 253255 >seq22505 Length=6242 Score = 95.1 bits (104), Expect = 3e-14 Identities = 96/125 (77%), Gaps = 0/125 (0%) Strand=Plus/Minus Query 206254 AAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAG 206313 ||||| ||||| || ||||| || || ||| ||| || || || || ||||| ||| Sbjct 3323 AAGATCCAAGACAAGGAAGGCATCCCACCTGACCATCAGAGGCTGATATTTGCCGGCAAG 3264 Query 206314 CAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCAC 206373 ||| |||| ||||| |||| || ||||||||||| ||||||||||||| ||| | ||| Sbjct 3263 CAGCTGGAGGATGGCCGGACCCTGTCCGATTACAACATCCAGAAAGAGTCCACTTTGCAC 3204 Query 206374 CTTGT 206378 || || Sbjct 3203 CTGGT 3199 >seq5999 Length=119422 Score = 95.1 bits (104), Expect = 3e-14 Identities = 96/125 (77%), Gaps = 0/125 (0%) Strand=Plus/Plus Query 206254 AAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAG 206313 ||||| ||||| || ||||| || || ||| ||| || || || || ||||| ||| Sbjct 2920 AAGATCCAAGACAAGGAAGGCATCCCACCTGACCATCAGAGGCTGATATTTGCCGGCAAG 2979 Query 206314 CAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCAC 206373 ||| |||| ||||| |||| || ||||||||||| ||||||||||||| ||| | ||| Sbjct 2980 CAGCTGGAGGATGGCCGGACCCTGTCCGATTACAACATCCAGAAAGAGTCCACTTTGCAC 3039 Query 206374 CTTGT 206378 || || Sbjct 3040 CTGGT 3044 >seq5954 Length=158713 Score = 93.3 bits (102), Expect = 1e-13 Identities = 138/196 (70%), Gaps = 0/196 (0%) Strand=Plus/Plus Query 206195 CAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGTAAAGCAAA 206254 |||| ||||| ||||| | || || || | ||||| | ||| || ||| | Sbjct 21477 CAGGGAAAACCATCACGCTCGAGGTTGAGCCCTTAGACACTATAGAAAATGTCAAGGCCA 21536 Query 206255 AGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAGC 206314 |||| || || || | |||||||| || || || || || |||||| | || |||| Sbjct 21537 AGATCCAGGATAAGGGAGGAATTTCTCCTGATCTGCAGAGGCTGATCTTCCCTGGCAAGC 21596 Query 206315 AGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCACC 206374 || |||||||||| | |||||| | || |||||| |||| | ||||| || ||| | | Sbjct 21597 AGCTGGAAGATGGCTGTACTTTGCCTGACTACAACATCCAAGAGGAGTCCACCCTTTATC 21656 Query 206375 TTGTTTTGAGACTTCG 206390 | || ||||||||||| Sbjct 21657 TGGTGTTGAGACTTCG 21672 Score = 86.0 bits (94), Expect = 1e-11 Identities = 77/97 (79%), Gaps = 0/97 (0%) Strand=Plus/Minus Query 204752 CGAAGTCTCAAAACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTC 204811 ||||||||||| || || | ||| || ||||| | |||| || ||||||| |||||| Sbjct 21672 CGAAGTCTCAACACCAGATAAAGGGTGGACTCCTCTTGGATGTTGTAGTCAGGCAAAGTA 21613 Query 204812 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATAAGCC 204848 | ||||||||||||||||| || | |||||| |||| Sbjct 21612 CAGCCATCTTCCAGCTGCTTGCCAGGGAAGATCAGCC 21576 >seq650 Length=610773 Score = 89.7 bits (98), Expect = 1e-12 Identities = 82/104 (79%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 204753 GAAGTCTCAAAACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTCC 204812 |||||||||| || || ||||| || ||||| || |||| | ||||||| |||||| | Sbjct 359078 GAAGTCTCAACACCAGATGAAGGGTGGACTCCTTTTGGATGCTGTAGTCAGACAAAGTAC 359137 Query 204813 TTCCATCTTCCAGCTGCTTTCCGGCGAAGATAAGCCGTTGTTGA 204856 ||||||||||||||||| || || ||||| |||| || ||| Sbjct 359138 GGCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGA 359181 >seq8984 Length=72256 Score = 86.0 bits (94), Expect = 1e-11 Identities = 92/122 (75%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 206254 AAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAG 206313 ||||| ||||| || ||||| || || ||| || || || || || ||||| ||| Sbjct 54481 AAGATCCAAGACAAGGAAGGCATCCCACCTGACCAGCAGAGGCTGATATTTGCCGGCAAG 54540 Query 206314 CAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCAC 206373 ||| |||| ||||| |||| || |||| |||||| ||||||||||||| ||| | ||| Sbjct 54541 CAGCTGGAGGATGGCCGGACCCTGTCCGACTACAACATCCAGAAAGAGTCCACTTTGCAC 54600 Query 206374 CT 206375 || Sbjct 54601 CT 54602 >seq5338 Length=92157 Score = 84.2 bits (92), Expect = 5e-11 Identities = 126/179 (70%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 206200 AAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGTAAAGCAAAAGATT 206259 ||||| ||||| |||| |||| |||||| |||| || ||| ||||| Sbjct 52339 AAAACCATCACCCTGGAGGTGGCGCCGAGTGACACCATCGAGAACGTGAAGGCCAAGATC 52280 Query 206260 CAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAGCAGTTG 206319 || || ||||| || || || ||| || |||| ||||| || || |||||| || Sbjct 52279 CAGGATAAAGAGGGCATCCCCCCCGACCAGCAGCGACTCATCTTTGCTGGCAAGCAGCTG 52220 Query 206320 GAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCACCTTGT 206378 |||||||| | ||| | | ||||||||| ||||||||||||| || || ||||| || Sbjct 52219 GAAGATGGCCGCACTCTTTCTGATTACAACATCCAGAAAGAGTCCACCCTGCACCTGGT 52161 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1180936154318583