Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ellobius_20lutescens_20[genbank_20GCA_5F001685075.1_202016-07-14] 58,423 sequences; 2,353,188,398 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq3071 91.5 1e-13 seq9705 87.8 2e-12 >seq3071 Length=285302 Score = 91.5 bits (100), Expect = 1e-13 Identities = 148/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 131911 CAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATC 131970 ||| |||| ||| | | | ||||| ||||| ||||||||||| || ||| | ||| Sbjct 253168 CAACACCAGATGAAGGATGGACTCCTTTTGGATGTTGTAGTCAGACAAAGTATGGCCATC 253227 Query 131971 TTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATC 132030 ||| ||||| || || | | |||| || ||| ||||| ||||| || ||||| ||||| Sbjct 253228 TTCCAGCTGCTTGCCAGCAAAGATCAGCTTCTGCTGATCAGGAGGAATTCCTTCCTTATC 253287 Query 132031 GGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGT 132090 || || || | | ||| | ||| || | || || || || | ||| | || Sbjct 253288 CTGGATCTTGGCCTTGACATTTTCTATAGTGTCTGAGGGTTCTACCTCAAGCGTGATGGT 253347 Query 132091 TTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 ||| || || || || || |||||||||||||| Sbjct 253348 TTTCCCCGTAAGGGTCTTCATGAAAATCTGCAT 253380 >seq9705 Length=66704 Score = 87.8 bits (96), Expect = 2e-12 Identities = 78/98 (80%), Gaps = 0/98 (0%) Strand=Plus/Minus Query 147505 TACTGCACGATTTCGGCGCACAGGTTGCTGCATTTTATGACTCCCAAATTTTGCTGATTG 147564 |||| || ||||| | ||||||||||||||||| ||| |||| || ||||| ||| Sbjct 20435 TACTCTACTATTTCTGTACACAGGTTGCTGCATTTGATGGTGCCCAGGTTCTGCTGGTTG 20376 Query 147565 CTTTTCCGATTGCACGCGTCTTTGAAGAGCATGTACGG 147602 || |||||||| || | |||||| ||||||||||||| Sbjct 20375 CTCTTCCGATTACAGGAATCTTTGTAGAGCATGTACGG 20338 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476263136798280