Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ellobius_20lutescens_20[genbank_20GCA_5F001685075.1_202016-07-14] 58,423 sequences; 2,353,188,398 total letters Query= NC_028379.1 Length=205896 Score E Sequences producing significant alignments: (Bits) Value seq5147 174 2e-38 >seq5147 Length=163313 Score = 174 bits (192), Expect = 2e-38 Identities = 575/886 (65%), Gaps = 21/886 (2%) Strand=Plus/Minus Query 13670 GCCCCTGAGCCTGGAAGAGGTCGAGTTTCCCATCGCCTACTCGATCGTGATCCACCACAA 13729 |||||| || || ||||| || |||||||| || || || || ||| | || ||||| Sbjct 92666 GCCCCTTAGTAAAGAGGAGGTAGACTTTCCCATTGCGTATTCCATAGTGGTTCATCACAA 92607 Query 13730 GATCGAGATGTTCGAGCGCCTCCTGAGGGCCATCTACGCCCCGCAGAACCTCTACTGCGT 13789 ||| || ||| | ||| | ||||||||||||||||| || ||||| |||| ||| | Sbjct 92606 GATTGAAATGCTTGAGAGGCTCCTGAGGGCCATCTATATGCCTCAGAATTTCTATTGCAT 92547 Query 13790 CCACGTGGACTCCAAGTCCGGCGA--CGAGTTCATCCGGGGCGTCTCGGCCATCGCCAGG 13847 ||||||||| || | | || | || | ||| || | || ||| || Sbjct 92546 TCACGTGGACAAAAAAGCAGAGGAGCCCTTTTTAGCCGCGGTGAT--GGGCATTGCGTCT 92489 Query 13848 TGCTTCCCTAACGTGGCCCTGGCCCACCGGCTGCACGACGTGGTGTACGGCTCCTGGAGT 13907 ||||| ||||| ||||| || |||| | |||| || || | ||||||||| Sbjct 92488 TGCTTGAAGAACGTCTTTGTGGCCAGCCAGCTGGAGAACGTCGTTTATGCGTCCTGGAGT 92429 Query 13908 CGCGTGCAGGCCGACCTCAGCTGCATGTCGGACCTGGACGCCTCCCCCGTCAAGTGGAGG 13967 || || ||||| ||||||| ||||||| ||||||| || | | || |||| | Sbjct 92428 CGGGTTCAGGCTGACCTCAACTGCATGAAGGACCTGTACAGCATGAGTGCAAACTGGAAG 92369 Query 13968 TACCTGCTCAACCTGTGCGGGATGGACTTCCCGCTCAAGACCAACCTGGAGATCGTGCGG 14027 ||| || ||||||| ||||| ||||||||||| | || ||||||||||| || || || Sbjct 92368 TACTTGATCAACCTTTGCGGTATGGACTTCCCTATTAAAACCAACCTGGAAATGGTCAGG 92309 Query 14028 GCGCTGAAGGC---CCTGGGCGGCAAGAACGCCCTGGAGAGCGAGGGCATGC--CCAACC 14082 |||||| | |||||||| | ||| |||||| | ||| |||| |||| Sbjct 92308 AAACTGAAGTCATTCCTGGGCG---AAAACAACCTGGAAACTGAGAAGATGCCTCCAA-- 92254 Query 14083 ACAAGCTGCACCGCATCAGGAAGAGGCACGTGGTGGCCAGCGGCGGCGTGGTGGTCAACA 14142 ||||| | | | | |||| | ||| || | || ||| | || |||| Sbjct 92253 ACAAGGAGGAAAGGTGGAAGAAGCGACACACCGTTG---TCGACGGGAAGCTGACGAACA 92197 Query 14143 CCGGCAGGAACAAGGCCCCGCCGCCGCTCAGGATCCCCATCTTTGCGGGAAACGCTTACT 14202 | || | ||| |||| |||||| |||| | || | || | || | || |||| Sbjct 92196 CTGGGGTGGCCAAAGCCCAGCCGCCCCTCACAACTCCTCTTTTCTCAGGCAGTGCCTACT 92137 Query 14203 TTGCGGTCACCCGGGAGTTCGTGGACTTCGTCCTCAAGGACGAGCCGGTGGCCCTGCTCA 14262 ||| ||||| |||| | || | ||| || || | | | | | | ||| Sbjct 92136 TTGTGGTCAGTAGGGAATATGTAGGCTTTGTGCTAGAAAATGGGAGCATCCAAAAGTTCA 92077 Query 14263 TGCACTGGTTCGAGGACACGTACAGCCCCGACGAGCACCTGTGGGCCACCGTGCAGAGAA 14322 || | ||| |||||||||| ||||| || ||| |||| ||||||||| | || || | Sbjct 92076 TGGAGTGGGCACAGGACACGTATAGCCCGGATGAGTACCTTTGGGCCACCATCCAAAGGA 92017 Query 14323 TGTACGGGACGCCCGGGGGGATCCCCGTTCACGTC--AAGTACGACACCTCGGACATGTG 14380 | | || | || || || || ||| | | ||||| ||| || |||||| Sbjct 92016 --TCCCTGAAGTCCCTGGTTCTCTCCCCTCAAGCCATAAGTATGACTTGTCCGACATGAA 91959 Query 14381 GGCCAAGGTCAGGTTCGTCAAGTGGCACTACTACGAGGGGGATATCAAGAAAGGGGCCCT 14440 || | ||||| ||||||||||| |||| || || ||| | ||||| || | Sbjct 91958 TGCTGTCGCTAGGTTTGTCAAGTGGCAGTACTTTGAAGGTGATGTTTCCAAAGGTGCTCC 91899 Query 14441 GTACCCGCCTTGCGACGGCATCCACGTCCACGCCATCTGCATCTTCGGGTCCGGCGACGT 14500 ||||| || ||| ||| |||| || | | || | ||| | || || | || ||| | Sbjct 91898 TTACCCACCGTGCAGCGGAGTCCATGTGCGCTCCGTGTGCGTTTTTGGAGCTGGTGACTT 91839 Query 14501 GAAGTGGCTGAAGAGCGTCCCGCACCTGTTCGCCAACAAGTTCGAC 14546 || ||| || || | ||| | |||||||| ||||| ||| Sbjct 91838 GAGCTGGATGCTTCGCAAACACCACTTCTTCGCCAATAAGTTTGAC 91793 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658258130996480