Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ellobius_20talpinus_20[genbank_20GCA_5F001685095.1_202016-07-14] 350,460 sequences; 2,265,966,243 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq68848 96.9 3e-15 >seq68848 Length=10048 Score = 96.9 bits (106), Expect = 3e-15 Identities = 142/200 (71%), Gaps = 1/200 (1%) Strand=Plus/Minus Query 22216 AAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACC 22275 || ||||| || ||||| || || | | || || || |||||||||| || | || Sbjct 7494 AACATGCAGATCTTTGTGAAGACCCTGATGGGCAAGACCATCACTCTTGAGGTCAAGCCC 7435 Query 22276 ACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGAT 22335 | || ||| | || || |||| | || ||||||||||| || || ||||| || Sbjct 7434 AGTGACACCATCGAGAATGTCAAGGCCGAGATCCAAGACAAGGAAGGCATCCCACCTGAC 7375 Query 22336 CAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTAC 22395 || || | || |||||||| ||||| ||| | ||||| || | ||| | ||||| ||| Sbjct 7374 CAGCAGAGGCTGATATTTGCAGGCAAGCAGCTGTAGGATGACTGGACCCTGTCCGACTAC 7315 Query 22396 AACATTCAAAAAGAATCCAC 22415 |||| || |||||| ||||| Sbjct 7314 AACA-TCCAAAAGAGTCCAC 7296 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 417935244649900