Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ellobius_20talpinus_20[genbank_20GCA_5F001685095.1_202016-07-14] 350,460 sequences; 2,265,966,243 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq18550 86.0 8e-12 >seq18550 Length=27441 Score = 86.0 bits (94), Expect = 8e-12 Identities = 101/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 112294 AGTCTCAAACCGAGACTGGTACACCATATATGCTTTACAAAGACGCCTGTAACCAAAAGA 112353 ||||||| || ||||| ||||| || || ||||| |||||||| ||||||| | |||| Sbjct 7017 AGTCTCAGACAGAGACAGGTACCCCGTACATGCTCTACAAAGATTCCTGTAATCGGAAGA 6958 Query 112354 GTAATCAAAAGAATTTGGGTGTGATCAAGAGTTCCAACCTCTGTACAGAAATCTTGGAAT 112413 | || || |||| |||| ||||| | |||||| ||||||||||| | || | Sbjct 6957 GCAACCAGCAGAACCTGGGCACCATCAAATGCAGCAACCTGTGTACAGAAATAGTAGAGT 6898 Query 112414 TTACAGACAAAGATGAG 112430 ||| |||||||||| Sbjct 6897 ATACCAGCAAAGATGAG 6881 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618023082731200