Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ellobius_20talpinus_20[genbank_20GCA_5F001685095.1_202016-07-14] 350,460 sequences; 2,265,966,243 total letters Query= NC_018504.1 Length=123876 Score E Sequences producing significant alignments: (Bits) Value seq68848 84.2 2e-11 >seq68848 Length=10048 Score = 84.2 bits (92), Expect = 2e-11 Identities = 132/189 (70%), Gaps = 0/189 (0%) Strand=Plus/Plus Query 101282 TTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATC 101341 ||||| || ||||| |||| | || | | |||| | || ||||| |||||||||||| Sbjct 7304 TTTTGGATGTTGTAGTCGGACAGGGTCCAGTCATCCTACAGCTGCTTGCCTGCAAATATC 7363 Query 101342 AAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCT 101401 | | ||| || || || || |||||||| || ||||| || | || ||| | || Sbjct 7364 AGCCTCTGCTGGTCAGGTGGGATGCCTTCCTTGTCTTGGATCTCGGCCTTGACATTCTCG 7423 Query 101402 ACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAAT 101461 | |||||| | | || |||||||||| || ||||| | | || || ||||| Sbjct 7424 ATGGTGTCACTGGGCTTGACCTCAAGAGTGATGGTCTTGCCCATCAGGGTCTTCACAAAG 7483 Query 101462 ATCTGCATG 101470 ||||||||| Sbjct 7484 ATCTGCATG 7492 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 394585803314220