Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ellobius_20talpinus_20[genbank_20GCA_5F001685095.1_202016-07-14] 350,460 sequences; 2,265,966,243 total letters Query= NC_021246.1 Length=281182 Score E Sequences producing significant alignments: (Bits) Value seq31296 86.0 1e-11 >seq31296 Length=16870 Score = 86.0 bits (94), Expect = 1e-11 Identities = 94/125 (75%), Gaps = 0/125 (0%) Strand=Plus/Plus Query 193236 CTCTGTTGATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATA 193295 ||||| ||||||||||| |||||||| ||||| | || |||| || | |||| ||| Sbjct 14548 CTCTGCTGATCAGGAGGAATTCCTTCCTTATCCCGGATCTTGGCCTTGACATTTTCTATA 14607 Query 193296 GTATCGGAAGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATT 193355 || || || | |||||| || || || || ||||| ||||| || || || || || || Sbjct 14608 GTGTCTGAGGGCTCAACCTCGAGCGTGATGGTTTTCCCTGTAAGGGTCTTCACGAAAATC 14667 Query 193356 TGCAT 193360 ||||| Sbjct 14668 TGCAT 14672 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 895713238987200