Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ellobius_20talpinus_20[genbank_20GCA_5F001685095.1_202016-07-14] 350,460 sequences; 2,265,966,243 total letters Query= NC_021248.1 Length=307691 Score E Sequences producing significant alignments: (Bits) Value seq148632 91.5 3e-13 >seq148632 Length=3950 Score = 91.5 bits (100), Expect = 3e-13 Identities = 130/183 (71%), Gaps = 0/183 (0%) Strand=Plus/Minus Query 192354 GATATTATAATCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCT 192413 ||| || || ||||| || || | ||||| |||| || || ||||||||||| | | Sbjct 333 GATGTTGTAGTCAGACAAAGTATGGTCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCTT 274 Query 192414 CTGTTGATCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGA 192473 ||| |||||||| | |||||||| ||||| || || || || ||||| ||||| Sbjct 273 CTGCTGATCAGGACGAATTCCTTCCTTATCCTGGATCTTGGCCTTGACATTTTCTATAGT 214 Query 192474 ATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTG 192533 ||||| | ||| || || || | |||||||| || | | || || || || ||||| Sbjct 213 GTCTGAGGGTTCAACCTCGAGCATGATGGTTTTCCCCATAAGGGTCTTCATGAAAATCTG 154 Query 192534 CAT 192536 ||| Sbjct 153 CAT 151 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 980059420221000