Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ellobius_20talpinus_20[genbank_20GCA_5F001685095.1_202016-07-14] 350,460 sequences; 2,265,966,243 total letters Query= NC_027016.1 Length=226084 Score E Sequences producing significant alignments: (Bits) Value seq26677 113 6e-20 >seq26677 Length=18315 Score = 113 bits (124), Expect = 6e-20 Identities = 113/147 (77%), Gaps = 0/147 (0%) Strand=Plus/Plus Query 214080 TACGTTTCGCACTGGGTAACGAGATGTTTGGACTCGTGCCCGGTTTCATGGTGTACGCCA 214139 |||| || ||| |||| | ||| | ||||| || ||||| ||| | ||| |||| |||| Sbjct 10377 TACGGTTGGCAGTGGGGCAGGAGGTCTTTGGTCTGGTGCCTGGTCTGATGATGTATGCCA 10436 Query 214140 TTATCTGGCTGAGAGAGCACAACAGGGTTTGCGACGTGCTGAAACAAGAGCACCCGGAAT 214199 ||||||||| | ||||||||||| || || || ||||| |||| ||||| || || | Sbjct 10437 CCATCTGGCTGCGGGAGCACAACAGAGTGTGTGATGTGCTTAAACGGGAGCATCCTGAGT 10496 Query 214200 GGAACGACGAACAGCTGTTCCAGATCA 214226 || |||| |||| ||| ||||||| || Sbjct 10497 GGGACGATGAACGGCTCTTCCAGACCA 10523 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 720172024790400