Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fukomys_20damarensis_20[refseq_20GCF_5F000743615.1_202014-09-04] 74,730 sequences; 2,333,892,479 total letters Query= NC_002188.1 Length=288539 Score E Sequences producing significant alignments: (Bits) Value seq70692 96.9 6e-15 >seq70692 Length=14042794 Score = 96.9 bits (106), Expect = 6e-15 Identities = 102/132 (77%), Gaps = 2/132 (2%) Strand=Plus/Minus Query 52057 GCATTTTTTGGAGCTCAGCTAAATTCTTTTATCCATGTTATTATGTACACTTATTATGGT 52116 |||||||||||||||||| | ||||| |||||||| || ||||||||| | || || || Sbjct 4331307 GCATTTTTTGGAGCTCAGATGAATTCCTTTATCCACGTGATTATGTACTCATACTACGGG 4331248 Query 52117 ATGGCCGCTTGTGGTCC-TATGTTCAGAAAGTATCTATGGTGGAAACGTTATCTTACTAT 52175 | | || | ||| || | ||||| |||||||| ||||||||||| || || || || Sbjct 4331247 TTAACTGCATTTGGCCCGTGGATTCAG-AAGTATCTCTGGTGGAAACGGTACCTGACCAT 4331189 Query 52176 AATGCAGTTGGT 52187 ||||| |||| Sbjct 4331188 GTTGCAGCTGGT 4331177 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 922334418789200