Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fukomys_20damarensis_20[refseq_20GCF_5F000743615.1_202014-09-04] 74,730 sequences; 2,333,892,479 total letters Query= NC_002520.1 Length=232392 Score E Sequences producing significant alignments: (Bits) Value seq71723 89.7 8e-13 >seq71723 Length=19027027 Score = 89.7 bits (98), Expect = 8e-13 Identities = 126/177 (71%), Gaps = 0/177 (0%) Strand=Plus/Minus Query 10437 GGATGTTATGCAAGATTAGCTCCCAGATCTGATTTAGCTCTAAATAAATTTATTGATATT 10496 ||||| |||| |||| ||||||| | |||| || ||| || | || || ||| || Sbjct 472139 GGATGCTATGGAAGAGTAGCTCCGCGTTCTGGCTTGGCTGCCAAACACTTCATAGATGTT 472080 Query 10497 GGAGCTGGAGTAATTGACGAAGATTATAGAGGAAATGTGGGAGTAATATTATTTAATCAT 10556 ||||||||||| || || |||||||||||||||||||| || || | | |||||| | Sbjct 472079 GGAGCTGGAGTCATAGATGAAGATTATAGAGGAAATGTTGGCGTTGTCCTGTTTAATTTT 472020 Query 10557 TCTAATGAAGATTTTATAATAAATAGAGGAGATAGAATATCTCAATTAATATGTGAA 10613 || || | ||| | |||| | ||| ||| |||| | || | || |||||| Sbjct 472019 GGCAAAGAGAAATTTGAAGTAAAAAAAGGTGATCGAATTGCGCAGCTCATTTGTGAA 471963 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 742831853401600