Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fukomys_20damarensis_20[refseq_20GCF_5F000743615.1_202014-09-04] 74,730 sequences; 2,333,892,479 total letters Query= NC_005337.1 Length=134431 Score E Sequences producing significant alignments: (Bits) Value seq74100 104 2e-17 >seq74100 Length=5970089 Score = 104 bits (114), Expect = 2e-17 Identities = 114/152 (75%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 127162 GGCTATTTAGGGTGCCAAGCTCTGTCTGAGATGATTCAGTTCTACCTCGAAGAGGTCATG 127221 ||||| | || |||||||| |||| |||||||| ||||| ||||| | ||||| ||| Sbjct 1893980 GGCTACCTGGGCTGCCAAGCCTTGTCGGAGATGATCCAGTTTTACCTGGTGGAGGTGATG 1893921 Query 127222 CCACAGGCAGAAAATCACGGACCCGACATAAAAGAACACGTCAATTCCCTGGGTGAAAAG 127281 || |||| || ||||||| ||| | | | || ||||| || |||||||| || ||| Sbjct 1893920 CCCAAGGCGGAGAATCACGACCCCAGCGTCCAGGAGCACGTGAACTCCCTGGGGGAGAAG 1893861 Query 127282 CTGAAGACATTGAGACTTCGACTGCGTCGCTG 127313 |||||||| | | || || ||||| ||||| Sbjct 1893860 CTGAAGACTCTCCGGCTGCGGCTGCGACGCTG 1893829 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429662718547760