Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fukomys_20damarensis_20[refseq_20GCF_5F000743615.1_202014-09-04]
74,730 sequences; 2,333,892,479 total letters
Query= NC_008518.1
Length=174059
Score E
Sequences producing significant alignments: (Bits) Value
seq71464 84.2 2e-11
>seq71464
Length=6720225
Score = 84.2 bits (92), Expect = 2e-11
Identities = 79/101 (78%), Gaps = 0/101 (0%)
Strand=Plus/Plus
Query 93362 ATGTATGTATCGATTAACAGAGAATACATTTCAGAATGGACATTCTCCATTGCAATTTGG 93421
||||| || ||||| | ||| |||||||||||||| | || ||||| |||||||||
Sbjct 4557895 ATGTAAGTGTCGATAAGGAGACTGTACATTTCAGAATGTATGTTTTCCATGGCAATTTGG 4557954
Query 93422 AATCCGTAGAAACATCTAGCTTCCGTGATCTGCACTTCTTG 93462
|| || |||||||| | ||||| || || || ||||||||
Sbjct 4557955 AAGCCATAGAAACAGCGGGCTTCTGTAATTTGAACTTCTTG 4557995
Score = 82.4 bits (90), Expect = 8e-11
Identities = 75/95 (79%), Gaps = 0/95 (0%)
Strand=Plus/Plus
Query 93152 CCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaaaaT 93211
|| || | |||||| |||||||||||||| || || || |||||| ||| ||||| ||
Sbjct 4556690 CCAGGCATCAGTCCCCGTTTCTTGAGCCAGAAAATGGACGCAAAAGAACCGGAAAAGAAG 4556749
Query 93212 ATACCTTCCACGGCTGCAAATGCCACAATACGTTC 93246
|| ||||||||||| ||||| || || | ||| ||
Sbjct 4556750 ATCCCTTCCACGGCCGCAAAGGCGACCACACGCTC 4556784
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 556340622405200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |