Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fukomys_20damarensis_20[refseq_20GCF_5F000743615.1_202014-09-04] 74,730 sequences; 2,333,892,479 total letters Query= NC_008725.1 Length=111953 Score E Sequences producing significant alignments: (Bits) Value seq70448 84.2 2e-11 >seq70448 Length=578665 Score = 84.2 bits (92), Expect = 2e-11 Identities = 150/219 (68%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 21824 ATAGTGCAAAATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAAC 21883 |||| ||||||||| || ||| | || || | || ||||| ||||| ||| |||| Sbjct 511208 ATAGGTCAAAATGCAGATCTTTGTGAAGACCCTGACTGGCAAGACCATCACCCTGGAGGT 511267 Query 21884 GGAAGCCGCAGAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACC 21943 ||| || || || | | || | ||| || || |||||||| || | || Sbjct 511268 GGAGCCCAGTGATACCATTGAGAATGTGAAGGCCAAGATCCAGGATAAAGAAGGCATCCC 511327 Query 21944 TGTAAACCAACAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGC 22003 | |||| ||||| || |||||||| ||||| || || |||||| ||| | | Sbjct 511328 TCCTGACCAGCAGAGGCTCATCTTTGCAGGCAAGCAGCTGGAAGATGGCCGCACTCTTTC 511387 Query 22004 CGATTACAATATTCAGAAGGAATCTACTCTTCATATGGT 22042 || |||||||||||||| || ||||||||||| |||| Sbjct 511388 TGACTACAATATTCAGAAAGAGTCTACTCTTCACCTGGT 511426 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 357798630004420