Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fukomys_20damarensis_20[refseq_20GCF_5F000743615.1_202014-09-04] 74,730 sequences; 2,333,892,479 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq71464 89.7 8e-13 >seq71464 Length=6720225 Score = 89.7 bits (98), Expect = 8e-13 Identities = 82/104 (79%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 159965 TCGTTGGACATGATGAGGCCCGGCATGATCCCACGCGGTTTGAGCCAAAAAATGGCCGCA 160024 |||||||| | | | ||||| ||||| | || || |||||||| ||||||| |||| Sbjct 4556672 TCGTTGGAAAAGGTAAGGCCAGGCATCAGTCCCCGTTTCTTGAGCCAGAAAATGGACGCA 4556731 Query 160025 AAAGCACCGCTAAAAAAGATCCCCTCCACGGCCGCAAACGCCAC 160068 |||| |||| ||| |||||||| |||||||||||||| || || Sbjct 4556732 AAAGAACCGGAAAAGAAGATCCCTTCCACGGCCGCAAAGGCGAC 4556775 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 794412425648800