Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fukomys_20damarensis_20[refseq_20GCF_5F000743615.1_202014-09-04] 74,730 sequences; 2,333,892,479 total letters Query= NC_020851.1 Length=208007 Score E Sequences producing significant alignments: (Bits) Value seq71208 100 4e-16 >seq71208 Length=22231620 Score = 100 bits (110), Expect = 4e-16 Identities = 78/93 (84%), Gaps = 0/93 (0%) Strand=Plus/Plus Query 48074 CACCATAAGGAGAACGTGGATAGAAAGGTGTGGTCTCTGTCTGTGGAGTCTCTTGCACCT 48133 ||||||| || || ||||| |||||||| |||||||| |||| || |||||||||||| Sbjct 1902317 CACCATAGGGTGACCGTGGGTAGAAAGGGGTGGTCTCCTTCTGGGGGATCTCTTGCACCT 1902376 Query 48134 TACCATAAAGTTCACTGGTGGATGCTTGATAGA 48166 | |||||||||||||| ||||| || || |||| Sbjct 1902377 TCCCATAAAGTTCACTTGTGGAGGCCTGGTAGA 1902409 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 664872745043600