Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fukomys_20damarensis_20[refseq_20GCF_5F000743615.1_202014-09-04] 74,730 sequences; 2,333,892,479 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq74456 84.2 6e-11 >seq74456 Length=5729656 Score = 84.2 bits (92), Expect = 6e-11 Identities = 138/199 (69%), Gaps = 0/199 (0%) Strand=Plus/Minus Query 302620 GTTTTTACAGCTGTATCAATTAGACCAACACGACCACCCATAGCATGGAAGAATAGCTCT 302679 || || |||||||| ||||| || || ||||||| ||||| ||||||||||| | || Sbjct 418862 GTCTTGACAGCTGTGTCAATGAGTCCCTCACGACCCCCCATGGCATGGAAGAAAAATTCA 418803 Query 302680 TCCGGTCGTAGCCCCCCAATAAAGGAGCTCTCAACGAAACCACGCGCCTCGGGCGAATCG 302739 ||| || || | | | ||| |||| || || ||||| ||| ||| || Sbjct 418802 GTGGGTGTGAGACCGGCCAGGTAAGAGTTCTCCACAAAGCCACGACTCTCAGGCCCATAA 418743 Query 302740 TCGAACTTGGTAAAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGATACGCTTTCCA 302799 || |||| | ||||| || || || | || || | | || |||| || ||||| || Sbjct 418742 TCATCCTTGATGAAGTGAGGTAGAGTGCGGTGCTTAAATCCAAATGGAATCCGCTTGCCC 418683 Query 302800 TCAACGTTCTGCTGTCCCA 302818 || || ||||||||||||| Sbjct 418682 TCCACATTCTGCTGTCCCA 418664 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1470408366844010