Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fukomys_20damarensis_20[refseq_20GCF_5F000743615.1_202014-09-04] 74,730 sequences; 2,333,892,479 total letters Query= NC_023639.1 Length=1168989 Score E Sequences producing significant alignments: (Bits) Value seq71536 176 3e-38 seq72617 131 1e-24 seq70743 127 2e-23 seq71278 118 8e-21 seq74560 105 5e-17 seq73626 105 5e-17 seq74017 104 2e-16 seq69760 104 2e-16 seq72554 102 6e-16 seq70384 86.0 5e-11 >seq71536 Length=14703830 Score = 176 bits (194), Expect = 3e-38 Identities = 936/1465 (64%), Gaps = 45/1465 (3%) Strand=Plus/Plus Query 281380 ATTAGTAATAGTAATATTCTTGGATTTGTTTGTTGATTTATCAGCGGCAGTCACATTAAG 281439 |||||| || ||||| || || ||| ||| || ||| | |||| ||| | || Sbjct 11864151 ATTAGTGATGGTAATCTTGTTCACTTTCCCTGTACTCTTGTCAACAGCAGAGACACTGAG 11864210 Query 281440 AATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTCTGAGCAGG 281499 || ||||||||||| | ||||| ||||| ||||| |||| || |||| | || | Sbjct 11864211 GATGCCATTGGCATCAATATCAATGGTGACCTCAATCTGAGTAACACCTCGGGGTGCCAG 11864270 Query 281500 TGGGATCCCTTCCAAATTAAATGTTCCCAGATTA--TTATTATCTTTAGTGAATTTTCGT 281557 || || ||| | || || || || | || || ||||| ||||| | | Sbjct 11864271 AGGTATACCTATGAG-TTCAAGCTTGTCA-AGTAGGTTGTTATCCTTAGTCATGGCACAC 11864328 Query 281558 TCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTGTAAATACT 281617 ||||| || | | ||| ||| || ||| || || || | || || || || | Sbjct 11864329 TCACCTTCTTATACTTGAATAAGCACACCAGGCTGGTTGTCACAGTAGGTAGTGAAGT-T 11864387 Query 281618 CTGGATTT-TTTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTCATAATACCACC 281676 ||| ||| ||| |||||| || | || | | || | ||||| | ||||| Sbjct 11864388 CTGTGTTTGTTTGGTAGGAATGGTAGCATTGCATTTGATGAGGACTGTCATGACTCCACC 11864447 Query 281677 AGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATATTTTGAAGTTT 281736 ||| ||||| | |||||| ||| |||| || |||| | || | | || || || || Sbjct 11864448 AGCAGTTTCAATACCAAGGGAAGGAGGCATGGCATCCAAAAGCAGCAAATCTTAAACATT 11864507 Query 281737 TTCATCAGTTTGAC--CAACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAACAGCT 281794 ||| || ||| | || || || ||||| |||| |||||||| ||| |||||||| Sbjct 11864508 TTC--CAACTTGTCTCCAGAGAGGATGGCTGCCTGAACAGCAGCACTATAAGCAACAGCC 11864565 Query 281795 TCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAATTTGAAAGAAGTTGT 281854 ||||||||||| | | | ||| | || ||| |||||||| |||| | |||| | | Sbjct 11864566 TCATCAGGATTGATGTTCTTATTCAATTCTTTTCCATTGAAGAAATCTTGTGGAAGCT-T 11864624 Query 281855 CTT-ACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATGCACCTGTGATTT 281913 || | |||||| ||| | | || || || |||| ||||| |||| | || || || Sbjct 11864625 CTAGATCTTAGGGATATGGGTAGAACCACCCACTAGAACAATGGCATGGATTTGCGACTT 11864684 Query 281914 ATCCAGTTTTGAATCCAATAAAA-CTTTTTCAACGGGTTCAAGACCAGCTCTA---AACA 281969 |||| ||| || || || | | || || || || || | ||| | | |||| Sbjct 11864685 GTCCAATTT-GA---CATGAAGAGCCTTCTCCACAGGGTCCA---CAGTGCCATGGAACA 11864737 Query 281970 AGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACATTATAA-TCAATTCCT 282028 ||| ||| | ||||| ||| ||| |||| | || | || || | ||| | Sbjct 11864738 GGTCAGAATTCAACTCTTCAAATCAAGCATGGGTAATGGAGA-AGTAGAAGTTGATTTCA 11864796 Query 282029 TCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCACGTTTAGCA 282088 || | | ||||||| ||||| || || ||| ||||| || | | ||||| Sbjct 11864797 TCATAGAGGGAATCAATCTCAATACCAGCTTTAGTGCTGGAAGAGAGGGTTCTCTTAGCT 11864856 Query 282089 CGTTCACATGCTGTCCTTAGTCTTCGTAAGGCTT--TTG-CTGATTGATTCAAATCTGTT 282145 | | |||||| || || || | | | ||| ||| || | | || ||| | Sbjct 11864857 TGCTAACATGCAGTACTGAGACAGCAGACAGCTCCCTTGTCTCACTAATG----TCTTTC 11864912 Query 282146 TTATATTTTCTCTTGAAATCTTCAACACACCATGTT--ACAAGACGATTATCAAAATCTT 282203 |||| | | |||| | | | ||| | ||| | || | | || || || || | Sbjct 11864913 TTATGCTCGTGCCTGAATTGTGCCACAAA--ATGGTTGACCATTTGGTTGTCTAAGTCAT 11864970 Query 282204 CACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTCAAGAG 282263 | | || | ||| | ||| | |||| | |||| | || | ||||||||||| | Sbjct 11864971 CTCT----AAGTGAGTGTCTCCAGGTGTAGATTTTACCTCAAAGATTCCATCTTCAATGG 11865026 Query 282264 ACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTT 282323 | | | ||||||| || ||||| || | || |||||| || ||||| |||| Sbjct 11865027 TGAGGATTGAAACATCAAAAGTGCCACCTCCTAAATAAAAAATCAGCACATTTCTTTCAG 11865086 Query 282324 TGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTC 282383 ||||| ||| | |||||| | | ||||||||| ||||| ||||| ||||||| Sbjct 11865087 CTCAAAAGTTTTCATCTAAACCATAAGTAGGAGCAGCAGCTGTTGGCTCATTGATAATTC 11865146 Query 282384 TCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGT 282443 | | ||| ||||| ||||||| |||| |||||||| || ||||| || || || | Sbjct 11865147 TAAGTACAATAAGATCAGCAATGGTTCCAGCATCTTTGGTTGCTTGATGCTGAGAGTCAT 11865206 Query 282444 TAAAATATGCAGGAACAGTAATAACGGCATCTGTTACTTCTTTTCCAATATAAGCGCTTG 282503 |||| || || || ||||| | || |||| || || || || |||| | |||| || Sbjct 11865207 TAAAGTAAGCTGGCACAGTGACGACAGCAT-TGGTAAATC-TTCCCAAGAAAAGCCTCTG 11865264 Query 282504 CTGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGGAGAATATTGCTTGG 282563 | ||| ||||| || | | | || || || | | |||||| | | ||| | Sbjct 11865265 CAATTTCCTTCATCTTTATCAGCACTATAGAAGATACTGCCTCTGGATAGAAGCTCTTTG 11865324 Query 282564 ATTCATTTTGATATGATACTTCAAAATATGGTTTATTACCAACATTAATAACTTTAAATG 282623 || | |||| |||| || | ||| | | || |||| | || | || | Sbjct 11865325 TCTCTCCTCTATATTGGACTTGAATCTTGGGTCTGCTTGCATCATTTACCACCATGAAGG 11865384 Query 282624 GCCAATATTTCATATCTGATTGAACACTTTGGTCATTAAAATCT-CTACCAATTAATCGT 282682 |||||| |||||||| | || ||| ||| | |||||| | ||||| | | Sbjct 11865385 GCCAATGCTTCATATC-AACTGGACAACAGCATCA-TCAAATCTACATCCAATCAGATGC 11865442 Query 282683 TTTGCATCAAAAATAGTATTGGTTGGATTAACTGCAGCTTGATATTTGGCTGCATCTCCA 282742 || ||||||||| || ||||| | || | |||| ||||| ||| || ||||||| Sbjct 11865443 TTGACATCAAAAACTGTGTTGGTGAGGTTCATTGCAACTTGACTTTTTGCAGCATCTCTG 11865502 Query 282743 ATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCTTGATCA 282802 ||||| ||| || || || || ||||| ||| || || | || || |||| | Sbjct 11865503 ATCAGTCGTTTAGTGTCGGTGAAAACCACATAACCTGGGGTGGTTCAGTTTCCCTGATTA 11865562 Query 282803 TTCGCAATAATTTCAACTTTACCAT 282827 || ||||| || || ||||| |||| Sbjct 11865563 TTGGCAATCATCTCCACTTTCCCAT 11865587 >seq72617 Length=4370498 Score = 131 bits (144), Expect = 1e-24 Identities = 343/516 (66%), Gaps = 8/516 (2%) Strand=Plus/Plus Query 281417 TTATCAGCGGCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATT 281476 || ||| | |||| ||||| || || ||||||||||| | |||||| ||||| ||||| Sbjct 4322872 TTGTCAACAGCAGGGACATTGAGGATGCCATTGGCATCAATATCAAAGGTGACCTCAATC 4322931 Query 281477 TGAGGGACCCCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTA 281536 ||||| || || ||| | ||||| | || ||| | | ||| | || || || Sbjct 4322932 TGAGGAACACCACTCGGTGCAGGATGTATGCCTATGATTTCAAACTTGCCAAGCACGTTG 4322991 Query 281537 TTATCTTTAGTGAATTTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTA 281596 ||||| | ||| | | ||||| || | | || ||| || ||| || | Sbjct 4322992 TTATCCTCAGTTATGGCACACTCACCTTCATATACCTGAATAAGCACACCAGGCTGGTCG 4323051 Query 281597 TCTGAATAAGTTGTAAATACTCTGGATTTTTTACA-AGGAATTGTTGTGTTTCTATCAAT 281655 || || || || ||| | |||| | | | |||||| || || || | | || Sbjct 4323052 TCAGAGTAGGTAGTATAGG-TCTGTGTCTGCTGGGTAGGAATGGTAGTATTGCGTTTGAT 4323110 Query 281656 AATATTGGTCATAATACCACCAGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAAC 281715 | ||||| | |||||||| ||||| | |||||| ||||||||||||||||| | Sbjct 4323111 GAGGGCTGTCATGACTCCACCAGCAGTTTCAATACCAAGGGAAAGAGGAGTGACATCCAA 4323170 Query 281716 TAGGACAATATTTTGAAGTTTTTCATCAGTTTG--ACCAACAAGAATAGCTGCTTGAATA 281773 || | | || ||||| ||||||| |||| || ||||| || || |||| | Sbjct 4323171 GAGCAGCAAATCTTGAACATTTTCAT--ATTTGCCTCCGGAGAGAATGGCCGCCTGAACA 4323228 Query 281774 GCAGCACCATATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTG 281833 || |||||| | |||||||| | |||||| || | | | ||| | || ||| ||| || Sbjct 4323229 GCTGCACCACAAGCAACAGCCTTATCAGGGTTGATGCTCTTATTCAATTCTTTTCCACTG 4323288 Query 281834 AAAAAATTTGAAAGAAGTTGTCT-TACCTTAGGAATACGAGATGATCCTCCAACTAATAC 281892 || |||| | ||||| | ||| | |||||| |||| | || | || || | || Sbjct 4323289 AAGAAATCTTGTAGAAGCT-TCTGGATCTTAGGGATACAGGTAGAACTACCCACCAGGAC 4323347 Query 281893 AATTTCATGCACCTGTGATTTATCCAGTTTTGAATC 281928 ||| ||||| | ||||| || |||||||| | ||| Sbjct 4323348 AATGTCATGGATTTGTGACTTGTCCAGTTTGGTATC 4323383 >seq70743 Length=2714810 Score = 127 bits (140), Expect = 2e-23 Identities = 362/549 (66%), Gaps = 8/549 (1%) Strand=Plus/Plus Query 281777 GCACCATATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAA 281836 |||||||| |||||||| || ||||| || | | | ||| | || ||| |||||||| Sbjct 1447011 GCACCATAGGCAACAGCCTCGTCAGGGTTGATGCTCTTATTCAATTCTTTTCCATTGAAG 1447070 Query 281837 AAATTTGAAAGAAGTTGTCTT-ACCTTAGGAATACGAGATGATCCTCCAACTAATACAAT 281895 |||| | ||||| | ||| | |||||||||||| | || || || || | ||||| Sbjct 1447071 AAATCTTGTAGAAGCT-TCTGGATCTTAGGAATACGGGTAGAACCACCCACCAGGACAAT 1447129 Query 281896 TTCATGCACCTGTGATTTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAG 281955 ||||| | ||||| || |||||||| | ||| | | | || || || || || || Sbjct 1447130 GTCATGGATTTGTGACTTGTCCAGTTTGGCATCTCGAAGAGCCTTCTCCACAGGGTCCAG 1447189 Query 281956 ACCAGCTCTAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACATT 282015 | | | |||| ||| | | | ||||| ||| ||| | |||| | | || Sbjct 1447190 AGTGCCACGGAACAGGTCAGCATTTAACTCTTCAAATCGAGCACGGGTAATGGAGGTATA 1447249 Query 282016 ATAATCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAG 282075 | || ||||| || | | ||||||| |||||| | | ||| || ||||| || Sbjct 1447250 GAAGTCGATTCCCTCATAGAGGGAATCAATTTCAATACTGGCTTGGGTGCTGGAAGAGAG 1447309 Query 282076 TGCACGTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGGCTTTTGCTGAT-TGAT 282134 | | ||||| ||||||||||| || | || | || | || | | || | | | Sbjct 1447310 GGTTCTCTTAGCTCGTTCACATGCAGTACGGAGACGGCGGACAGC-TCTCTTGTTCTCAC 1447368 Query 282135 TCAAATCTGTTTTATATTTTCTCTTGAAATCTTCAACACACCATG--TTACAAGACGATT 282192 | | ||| | |||| || | |||||| ||| ||| | | ||| | || | || || Sbjct 1447369 TAATGTCTTTCTTATGCTTACGCTTGAATTCTGCAATAAA--ATGGTTGACCATTCGGTT 1447426 Query 282193 ATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCC 282252 ||||| ||||| || || || | || | ||| | |||| | |||| | || | ||| Sbjct 1447427 GTCAAAGTCTTCTCCACCTAAATGGGTGTCTCCAGCTGTAGATTTTACCTCAAAGATTCC 1447486 Query 282253 ATCTTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTAC 282312 |||||||| || | | | |||||| || ||||| || | ||||||||| || || Sbjct 1447487 ATCTTCAATAGTGAGGATTGACACATCAAAAGTGCCACCTCCTAAATCAAAAATCAGCAC 1447546 Query 282313 ATTCATTTC 282321 ||| |||| Sbjct 1447547 ATTTCTTTC 1447555 Score = 122 bits (134), Expect = 7e-22 Identities = 112/142 (79%), Gaps = 0/142 (0%) Strand=Plus/Plus Query 282332 TTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACA 282391 ||||| || | ||||| |||| ||||||||| ||||||||||| |||||||| | ||| Sbjct 1447644 TTTTTGTCTAAGCCATAAGCAATAGCAGCAGCTGTTGGTTCATTGATAATTCTAAGTACA 1447703 Query 282392 TTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATAT 282451 |||||||||||||| |||| |||||||| || ||||| | || || || ||||| || Sbjct 1447704 TTAAGACCAGCAATGGTTCCAGCATCTTTGGTTGCTTGACGCTGAGAGTCATTAAAGTAA 1447763 Query 282452 GCAGGAACAGTAATAACGGCAT 282473 || || ||||| | || |||| Sbjct 1447764 GCTGGCACAGTGACCACAGCAT 1447785 Score = 93.3 bits (102), Expect = 3e-13 Identities = 132/186 (71%), Gaps = 0/186 (0%) Strand=Plus/Plus Query 282690 CAAAAATAGTATTGGTTGGATTAACTGCAGCTTGATATTTGGCTGCATCTCCAATCAGAT 282749 |||||| || ||||| || || | |||| |||||| ||| || |||||||| ||||| Sbjct 1448565 CAAAAACTGTGTTGGTGGGGTTCATTGCAACTTGATTTTTCGCAGCATCTCCGATCAGTC 1448624 Query 282750 GTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCTTGATCATTCGCAA 282809 | || || || || || | ||||| ||| || || || || || ||||| || || | Sbjct 1448625 GCTCGGTGTCGGTGAAAGCGACATAACTTGGGGTGGTTCGGTTTCCCTGATCGTTGGCGA 1448684 Query 282810 TAATTTCAACTTTACCATTTTGCCATACACCTACACAACTAAAAGTTGTTCCTAAATCAA 282869 | || || ||||| |||| || | ||||| ||||| | || || || | ||||| Sbjct 1448685 TTATCTCCACTTTCCCATGCTGGAAAACACCCACACAGGAGTAGGTGGTGCCAAGATCAA 1448744 Query 282870 TACCAA 282875 |||||| Sbjct 1448745 TACCAA 1448750 >seq71278 Length=4079834 Score = 118 bits (130), Expect = 8e-21 Identities = 150/205 (73%), Gaps = 10/205 (5%) Strand=Plus/Minus Query 282271 AGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTGTCTTG 282330 || || |||| ||||||||||| | |||| | |||| ||| |||||||| Sbjct 2978048 AGAAATATCAAAAGTTCCACCACCTAAATCATA------TACAGCAATTATTTTGTCTTC 2977995 Query 282331 GTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAA-- 282388 |||||| |||||||| || | ||||||||| |||||||||||||| | | |||| Sbjct 2977994 AGATTTATCTAGACCATAGGCCAGAGCAGCAGCTGTTGGTTCATTAATCA--CCCAAAGC 2977937 Query 282389 ACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAA 282448 ||||| || |||| || || ||||| |||||||| |||||||| | || || ||| Sbjct 2977936 ACATTCAGTCCAGATATCTGGCCAGCATCCTTAGTGGCCTGTCTTTGCAAGTCATTGAAA 2977877 Query 282449 TATGCAGGAACAGTAATAACGGCAT 282473 || ||||| || || || ||||||| Sbjct 2977876 TAAGCAGGGACTGTTATCACGGCAT 2977852 >seq74560 Length=12976642 Score = 105 bits (116), Expect = 5e-17 Identities = 514/806 (64%), Gaps = 44/806 (5%) Strand=Plus/Plus Query 281663 GTCATAATACCACCAGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACA 281722 ||||| | ||||||||| ||||| || ||||||||||| ||||| | || ||| Sbjct 6030330 GTCATGACACCACCAGCAGTTTCAGTACTAAGAGAAAGAG-----ACATCCA--AGAACA 6030382 Query 281723 --ATATTTTGAAGTTTTTCATCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCAC 281780 | || ||||| |||||| | | ||| | ||| ||||| |||| ||| || | Sbjct 6030383 GCAAATCTTGAACATTTTCAGACTTGTCTCCAGAGAAAATGGCTGCCTGAACAGCTGCGC 6030442 Query 281781 CATATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAAT 281840 ||| | ||| || ||||||||||| | | | | ||| | || ||| |||||||| |||| Sbjct 6030443 CATCAGTAACTGCCTCATCAGGATTGATACTCTTATTCAATTCTTTTCCATTGAAGAAAT 6030502 Query 281841 -TTGAAAGAAGTTGTCTTACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCA 281899 |||||| || || | | |||||| ||| | | || || || || | ||||| ||| Sbjct 6030503 CTTGAAA-AACTTCT-GGATCTTAGGGATATGGGTAGAACCACCCACCAGGACAATGTCA 6030560 Query 281900 TGCACCTGTGATTTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCA 281959 || || |||| | | |||||| | ||| || | || |||| ||| Sbjct 6030561 TGGACTGGTGACGTTTGGCATTTTGA-------AGAACCTTATGCACAGGTTTCAGAGTG 6030613 Query 281960 GCTCTAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACATTATAA 282019 | | ||||| ||| | ||||| || | ||| |||| | | || | Sbjct 6030614 CCACCAAACAGGTCAATATTCCACTCTTCAAACTGAGCATGGGTAATGGAGGTATAGAAG 6030673 Query 282020 TCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCA 282079 ||||||||||| | | |||| || ||||| | ||||| || ||||| || | Sbjct 6030674 TCAATTCCTTCATAGAGGGAATTAATCTCAATACTGGTTTGGGTGCTGGAAGAGAGGGTT 6030733 Query 282080 CGTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGGCTTTTGCTGAT-TGATTCAA 282138 | ||||| || |||||||| | | || | | ||| || || | | | | | Sbjct 6030734 CCCTTAGCTCG-TCACATGCAGCACAGAGATAGCAGACAGCTCTT-TTGTTCTCACTTAT 6030791 Query 282139 ATCTGTTTTATATTTTCTCTTGAAATCTTCAACACACCATG--TTACAAGACGATTATCA 282196 ||| | |||| ||| |||||| ||| || | | ||| | || | || || || Sbjct 6030792 GTCTTTCTTATTTTTGTGCTTGAACTCTGAAATAAA--ATGGTTGACCATTCGGTTGTCC 6030849 Query 282197 AAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCT 282256 || ||||| || || || | || ||| | |||| |||| || | Sbjct 6030850 AAGTCTTCTCCACCTAAGTGGGTGCCTCCAGCTGTAG-----ACTT---------CA-CC 6030894 Query 282257 TCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTC 282316 ||||| | | | | |||||| ||| ||||| || | |||||| || || ||| Sbjct 6030895 TCAAGTG---AGACTGACACATCAAAGGTGCCACCTCCTAAATCAAATATCAGCGTATTT 6030951 Query 282317 ATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTA 282376 |||| | ||||| || | ||||| | | ||||||||| ||||| ||||| Sbjct 6030952 CTTTCAGCTCCAACCTTTTTGTCTAAGCCATAAGTGATAGCAGCAGCTGTTGGCTCATTG 6031011 Query 282377 ATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGT 282436 |||||||| | |||| |||||||||||| |||| |||||||| || ||||| | || Sbjct 6031012 ATAATTCTAAGTACATGAAGACCAGCAATGGTTCCAGCATCTTTGGTTGCTTGACCCTGA 6031071 Query 282437 GAATCGTTAAAATATGCAGGAACAGT 282462 | | ||||| || | || ||||| Sbjct 6031072 GGGTTATTAAAGTAAACTGGTACAGT 6031097 >seq73626 Length=12063405 Score = 105 bits (116), Expect = 5e-17 Identities = 483/754 (64%), Gaps = 24/754 (3%) Strand=Plus/Minus Query 281756 AGAATAGCTGCTTGAATAGCAGCACCATATGCAACAGCTTCATCAGGATTAACAGTTTCA 281815 ||||| ||||| |||| ||| |||||||| ||||| |||||| |||||| | | | | Sbjct 6879084 AGAATGGCTGCCTGAACAGCGGCACCATAAGCAACTGCTTCACTAGGATTGATGCTCTTA 6879025 Query 281816 TTTAGTTTTTTACCATTGAAAAAATTTGAAAGAAGTTGTCTT-ACCTTAGGAATACGAGA 281874 || | || ||| ||||||| |||||| ||||| | ||| | |||||| || | | Sbjct 6879024 TTCAATTCTTTTTCATTGAAGAAATTTTGTAGAAGCT-TCTGGATCTTAGGGTTATGGGT 6878966 Query 281875 TGATCCTCCAACTAATACAATTTCATGCACCTGTGATTTATCCAGTTTTGAATCCAATAA 281934 | || || || | ||||| ||||| | |||| || ||||| || | || | Sbjct 6878965 AAAACCACCCACCAGGACAATGTCATGGATTGGTGACTTGTCCAGCTTGGCATTTTGAAG 6878906 Query 281935 AACTTTTTCAACGGGTTCAAGACCAGCTCTAAACAAGTCTGAACAAAGTTCTTCGAATTT 281994 | || || || || || ||| | | |||| ||| | | | ||||| |||| Sbjct 6878905 GGCCTTCTCCACAGGGTCCAGAGTGCCACAGAACAGGTCAGCATTCAACTCTTCAAATTG 6878846 Query 281995 AGCTCTAGTAA--GAG-TGACATTATAATCA-ATTCCTTCGAACAAAGAATCAACTTCAA 282050 ||| ||| ||| || || || | |||||||| | | |||| || |||| Sbjct 6878845 AGCATGGATAATGGAGGTG----TAGAAGCCGATTCCTTCATAGAGGGAATTAATCTCAA 6878790 Query 282051 TCGTAGTTTGAGTCGAAGAAGATAGTGCACGTTTAGCACGTTCACATGCTGTCCTTAGTC 282110 | ||| || ||||| || | | | ||| ||||||||||| || || | Sbjct 6878789 CACTGCCTTGGGTGCTGGAAGAGAGGGTTCTCTGAGCTCGTTCACATGCAGTATGGAGAC 6878730 Query 282111 TTCGTAAGGCT----TTTGCTGATTGATTCAAATCTGTTTTATATTTTCTCTTGAAATCT 282166 | | ||| ||| || | | || ||| | |||| || | |||||| | | Sbjct 6878729 AGCAGACAGCTCTCTTTTTCTCAGTTATG----TCTTTCTTATTCTTGCACTTGAACTAT 6878674 Query 282167 TCAACACACCATGTT--ACAAGACGATTATCAAAATCTTCACCTCCCAATTTAGTATTTC 282224 ||| | | ||| | || | | || || |||||||| || || | | || | || Sbjct 6878673 GCAATAAA--ATGGTTGACTATTCAGTTGTCCAAATCTTCTCCACCTGAGTGGGTGTCTC 6878616 Query 282225 CTGACGTAGCTCTTACTTGGAAAAGTCCATCTTCAAGAGACAAAAGAGTAACATCATGGG 282284 | | ||| | | || | || | |||||||||| || | | | |||||| | Sbjct 6878615 CAGCTGTACATTTCACCTCAAAGATTCCATCTTCAGTAGCAAGGACTGACACATCAAAAG 6878556 Query 282285 TTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTGTCTTGGTTTTTATCAAGAC 282344 | ||||| || | |||||| | || ||||| |||| | ||||| || | | Sbjct 6878555 TACCACCTCCTAAATCAAACACCAGCACATTTCTTTCAGCTCCAACCTTTTTGTCTAAGC 6878496 Query 282345 CATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAA 282404 |||| |||| |||||||| ||||| | || |||||||| | |||||||||||||||| Sbjct 6878495 CATAAGCAATAGCAGCAGATGTTGGCTTGTTGATAATTCTAAGTACATTAAGACCAGCAA 6878436 Query 282405 TTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAA 282464 | |||| |||||||| || ||||| || || | |||| || || || ||||| | Sbjct 6878435 TGGTTCCAGCATCTTTGGTTGCTTGATGCTGAGAGCCACTAAAGTAAGCTGGCACAGTGA 6878376 Query 282465 TAACGGCATCTGTTACTTCTTTTCCAATATAAGC 282498 || |||| || | || || |||| |||||| Sbjct 6878375 CCACAGCAT-TGGCAAGTC-TTCCCAAGATAAGC 6878344 >seq74017 Length=2439271 Score = 104 bits (114), Expect = 2e-16 Identities = 115/152 (76%), Gaps = 1/152 (1%) Strand=Plus/Minus Query 282303 AAATAAGTACATTCATTTCTTTGT-CTTGGTTTTTATCAAGACCATACGCAAAAGCAGCA 282361 |||||| | | ||||||||| || ||||| || | |||||| |||| ||||||| Sbjct 2281 AAATAAATCAACACATTTCTTTTAGCTCCATTTTTGTCTAAACCATAAGCAATAGCAGCA 2222 Query 282362 GCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTA 282421 || ||||| ||||| |||||||| | ||||||||||||||||| |||| |||||||| Sbjct 2221 GCTGTTGGCTCATTGATAATTCTAAGTACATTAAGACCAGCAATGGTTCCAGCATCTTTG 2162 Query 282422 GTGGCTTGTCTTTGTGAATCGTTAAAATATGC 282453 | ||||| | || || | ||||| || || Sbjct 2161 GGTGCTTGACACTGAGAGCCATTAAAGTAAGC 2130 >seq69760 Length=5087377 Score = 104 bits (114), Expect = 2e-16 Identities = 96/122 (79%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 131181 TAGCCACAATAGCATTTGGTATGGGTATTAATAAACCGGATGTTAGAGTTGTTATTCATT 131240 ||||||| ||||| ||||| ||||| ||||||||| | |||||| | || ||||||| Sbjct 4871903 TAGCCACTATAGCTTTTGGAATGGGCATTAATAAATCTGATGTTCGCAAAGTCATTCATT 4871962 Query 131241 ACGGAGCTCCCAAGAATATTGAAGGTTATTATCAAGAAATTGGTAGAGCAGGTCGTGATG 131300 | || || || ||| | || ||| ||||| || |||||||||||||| || ||||||| Sbjct 4871963 ATGGTGCACCTAAGGAAATGGAATCATATTACCAGGAAATTGGTAGAGCTGGCCGTGATG 4872022 Query 131301 GA 131302 || Sbjct 4872023 GA 4872024 >seq72554 Length=2747032 Score = 102 bits (112), Expect = 6e-16 Identities = 178/253 (70%), Gaps = 6/253 (2%) Strand=Plus/Plus Query 281673 CACCAGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATATTTTGAA 281732 || || | ||||| | |||||| ||||||||||||||||| | || | | || ||||| Sbjct 781288 CAGCAACAGTTTCAATACCAAGGGAAAGAGGAGTGACATCCAAGAGCAGCAAATCTTGAA 781347 Query 281733 GTTTTTCATCAGTTTGAC-CAACA-AGAATAGCTGCTTGAATAGCAGCACCATATGCAAC 281790 |||||| | ||| | | | | ||||| ||||| | || || |||||||| |||| Sbjct 781348 CATTTTCA--AACTTGTCTCTAGAGAGAATGGCTGCCTAAACAGGTGCACCATAAGCAAG 781405 Query 281791 AGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAATTTGAAAGAAG 281850 ||| | |||||||| | | | ||| |||| ||| ||| |||| |||| | ||||| Sbjct 781406 AGCCTTGTCAGGATTGATGCTCTTATTCAGTTCTTTTCCACTGAAGAAATCTTGTAGAAG 781465 Query 281851 TTGTCT-TACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATGCACCTGTG 281909 | ||| | |||||| ||| | | || || || || | ||||| | ||| | ||| Sbjct 781466 CT-TCTGGATCTTAGGGATATGGGTAGAACCACCCACCAGGACAATGTTATGGATTGGTG 781524 Query 281910 ATTTATCCAGTTT 281922 | || |||||||| Sbjct 781525 ACTTGTCCAGTTT 781537 >seq70384 Length=4945429 Score = 86.0 bits (94), Expect = 5e-11 Identities = 175/258 (68%), Gaps = 4/258 (2%) Strand=Plus/Minus Query 281664 TCATAATACCACCAGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAA 281723 |||| | |||||||| || || | |||||| ||||| |||||| | || || | || Sbjct 2353494 TCATGACTCCACCAGCAGTCTCAATACCAAGGGAAAGGGGAGTGCC--CAG--AGCAGAA 2353439 Query 281724 TATTTTGAAGTTTTTCATCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACCAT 281783 || || || |||||| | ||| ||||| || | |||| ||| ||||||| Sbjct 2353438 AATCTTAAATATTTTCAGACTTGCCTCCAGACAGAATGGCCACCTGAACAGCTGCACCAT 2353379 Query 281784 ATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAATTTG 281843 | ||||||||||||||||| || | | | |||||||| ||| |||| | | |||| | Sbjct 2353378 AAGCAACAGCTTCATCAGGGTTGATGCTCTTATTTAGTTCTTTCCCATGGGAGAAATCTT 2353319 Query 281844 AAAGAAGTTGTCTTACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATGCA 281903 | ||||| | | | |||||| || | || || || | | ||||| | || | Sbjct 2353318 ATAGAAGCTTTTGGATCTTAGGGCTATAGGTAGAACCACCCATCAGGACAATGTAATAGA 2353259 Query 281904 CCTGTGATTTATCCAGTT 281921 ||||| || ||||||| Sbjct 2353258 TTTGTGACTTGTCCAGTT 2353241 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3736961472808980