Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fukomys_20damarensis_20[refseq_20GCF_5F000743615.1_202014-09-04] 74,730 sequences; 2,333,892,479 total letters Query= NC_024303.1 Length=144898 Score E Sequences producing significant alignments: (Bits) Value seq71464 91.5 1e-13 >seq71464 Length=6720225 Score = 91.5 bits (100), Expect = 1e-13 Identities = 107/145 (74%), Gaps = 0/145 (0%) Strand=Plus/Plus Query 21122 TCTAGCATTTGGGGGCCTAGCTGCGATGGCTTAGATTGCATTGTTAAGCGGTGTGAACTG 21181 || ||||| |||||||| | ||||| ||| | || |||| || |||| || || ||| Sbjct 4432716 TCCAGCATCTGGGGGCCCACATGCGACGGCCTGGACCGCATCGTGGAGCGCTGCGACCTG 4432775 Query 21182 CCAGAGCTTCAAGTGGGCGACTGGCTCATATTTGAAAACATGGGCGCTTACAGCTTGGTC 21241 |||||| | || |||||||||||| | | ||||| ||||||||||| |||| | | | | Sbjct 4432776 CCAGAGGTGCACGTGGGCGACTGGATGCTCTTTGAGAACATGGGCGCCTACACCGTCGCC 4432835 Query 21242 AGCTCTTCAACCTTTAACGGCTTCC 21266 | || || || || ||||||| Sbjct 4432836 GCAGCCTCCACTTTCAATGGCTTCC 4432860 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 463112590466400