Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fukomys_20damarensis_20[refseq_20GCF_5F000743615.1_202014-09-04] 74,730 sequences; 2,333,892,479 total letters Query= NC_031224.1 Length=59443 Score E Sequences producing significant alignments: (Bits) Value seq72168 93.3 2e-14 >seq72168 Length=9498425 Score = 93.3 bits (102), Expect = 2e-14 Identities = 103/135 (76%), Gaps = 2/135 (1%) Strand=Plus/Minus Query 52110 ATGGCGTTGGCTCCCTGCCATACACTATTCCAATTCTATGTAGCTGAA-GGTAAGCTTTC 52168 |||||| || |||||||||| | || | |||||||||||| | |||| || |||| || Sbjct 6792662 ATGGCGCTGCCTCCCTGCCACGCCCTCTGCCAATTCTATGT-GGTGAACGGGGAGCTGTC 6792604 Query 52169 GTGCCATTTGTATCAGCGGTCTGCCGACATGTTCTTGGGCGTTCCGTTTAACATTGCCAG 52228 ||||| |||| ||||| || | |||||| | ||||||| || || ||||| ||||| Sbjct 6792603 CTGCCAGCTGTACCAGCGCTCCGGGGACATGGGCCTGGGCGTGCCCTTCAACATCGCCAG 6792544 Query 52229 CTATTCCTTGCTGAC 52243 ||| || |||| || Sbjct 6792543 CTACGCCCTGCTTAC 6792529 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 189927305245300