Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heterocephalus_20glaber_20[refseq_20GCF_5F000247695.1_202012-02-17] 4,229 sequences; 2,618,204,639 total letters Query= NC_002188.1 Length=288539 Score E Sequences producing significant alignments: (Bits) Value seq90 95.1 2e-14 >seq90 Length=10032467 Score = 95.1 bits (104), Expect = 2e-14 Identities = 103/133 (77%), Gaps = 4/133 (3%) Strand=Plus/Minus Query 52057 GCATTTTTTGGAGCTCAGCTAAATTCTTTTATCCATGTTATTATGTACACTTATTATGGT 52116 |||||||||||||| ||| | ||||| |||||||| || |||||||| | || ||||| Sbjct 6576663 GCATTTTTTGGAGCGCAGATGAATTCCTTTATCCACGTGATTATGTATTCATACTATGGA 6576604 Query 52117 ATGGCCGCTTGTGGTCCTATG--TTCAGAAAGTATCTATGGTGGAAACGTTATCTTACTA 52174 | | || | ||| || ||| ||||| |||||||| ||||||||||| || || || | Sbjct 6576603 TTAACTGCATTTGG-CCCATGGATTCAG-AAGTATCTCTGGTGGAAACGGTACCTGACCA 6576546 Query 52175 TAATGCAGTTGGT 52187 | ||||| |||| Sbjct 6576545 TGTTGCAGCTGGT 6576533 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 923147997509160