Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heterocephalus_20glaber_20[refseq_20GCF_5F000247695.1_202012-02-17] 4,229 sequences; 2,618,204,639 total letters Query= NC_002665.1 Length=108873 Score E Sequences producing significant alignments: (Bits) Value seq52 1265 0.0 seq82 132 3e-26 seq27 111 1e-19 >seq52 Length=15405845 Score = 1265 bits (1402), Expect = 0.0 Identities = 1254/1617 (78%), Gaps = 53/1617 (3%) Strand=Plus/Minus Query 107144 AGGCAGGACTTGACTGAGGATATTTGTCTATAGAAGACAT--CTATCTTTACCATCACTC 107201 ||||||| ||| ||||||| ||||| || || ||| || ||| ||| | |||| | Sbjct 12524241 AGGCAGGTCTTTGTTGAGGATGTTTGTGTAGAGCAGAAATACCTAG-TTTGCTATCAGTT 12524183 Query 107202 TGGAGTTGAACTTGATGTTC-----------TGGAT---TAGTTTGTAATTAAAGGCATT 107247 |||||||| |||| ||| || || |||||||||| | ||||||| Sbjct 12524182 CCGAGTTGAAGTTGACATTCCCATGAATGTGTGCATGGTTAGTTTGTAACTGGAGGCATT 12524123 Query 107248 TTGTTCTGTCCAAGGA-TCTCCTCCTCCACCT--TGCCTGTGCCCAAACTCTCCTGATCT 107304 |||||| |||||||| ||| ||| ||| || | || ||| || ||| ||| Sbjct 12524122 TTGTTCCATCCAAGGAGTCTG-TCCCCCATCTGCTCCCCGTGTGCA-------CTGGTCT 12524071 Query 107305 CCCATCCCATGAAGATGGCTGGGTGGAAGAAGAAGCTTTGCCGGGGACATCATCTGTGGG 107364 || | | ||||||||| | |||||||| || | ||| |||| |||||| Sbjct 12524070 CCTGTTCTATGAAGATGATTACATGGAAGAAA---CTCAGACGGAATTATCACGTGTGGG 12524014 Query 107365 CCCTGGGCTGCTATATGCTGCTGGCCGTTGTTTCTCTGAGACTTTCCCTCAGGTTTAAAT 107424 ||||||||| || ||| |||||||| ||||| || |||||||||| ||||| | || | Sbjct 12524013 TCCTGGGCTGTTACATGGTGCTGGCCATTGTTGCTTTGAGACTTTCTCTCAGACTGAAGT 12523954 Query 107425 GTGATGTAGATTCCTTGGATCTGGAGTCCAGGGACTTCCAGAGTCAGCACTGTAGGGACA 107484 ||||| | ||| || || |||| |||| ||| | | | ||| |||||||| | | Sbjct 12523953 GTGATTTTGATCAGCTGTATTTGGACTCCAAGGAACTTCTCACCCAGTACTGTAGGAATA 12523894 Query 107485 TGTTGTACAATAGCCTGAAGCTGCCAGCAAAGAGATCCATCAACTGTTCTGGGATCACGC 107544 | |||||| | | ||| ||||||||||||||| |||||||||||||| ||| |||| Sbjct 12523893 TCTTGTACGAATCCTTGAGGCTGCCAGCAAAGAGGTCCATCAACTGTTCGGGGGTCACCA 12523834 Query 107545 GAGGGGACCAGGAAGCAGTGGTCCAGGCCCTCCTAGACAACCTGGAAGTGAAGAAAAAGC 107604 |||||||||||||||||||| ||||||| | || | ||| |||| || ||||| || | Sbjct 12523833 GAGGGGACCAGGAAGCAGTGATCCAGGCTGTTCTGAATAACTTGGAGGTCAAGAAGAATC 12523774 Query 107605 GGTCGCCTCTCACTGGCACCTATTACCTCAACATAACCAGAGACTGTGAGCGCTTCAAGG 107664 || |||| || | | | | || ||| || ||||||||||||||| || |||| Sbjct 12523773 GGCAGCCTTTCTCAGATGCTGACTATATCACTATGACCAGAGACTGTGAGGAATTTAAGG 12523714 Query 107665 CCCAAAGGAAGTTCATACAGTTCCCACTGAGTAAAGAAGAGCTAGACTTCCCCATTGCCT 107724 ||||||||| |||| | || ||| | ||| | ||||||| |||||||||| ||||| | Sbjct 12523713 CCCAAAGGAGGTTCCTGCATTTCTCGACGAGCAGAGAAGAGTTAGACTTCCCTATTGCAT 12523654 Query 107725 ACTCGATGGTGGTCCATGAGAAGATTGAAAACTTTGAACGGCTGCTGCGAGCCGTGTATG 107784 |||| |||||||| |||||||| |||||||||||||| ||||||| ||||| ||||||| Sbjct 12523653 ACTCCATGGTGGTTCATGAGAAAATTGAAAACTTTGAGAGGCTGCTTCGAGCTGTGTATG 12523594 Query 107785 CCCCTCAGAACATATACTGTGTCCACGTGGATGTGAAGTCCCCAGAGACTTTCAAAGAGG 107844 |||||||||| ||||||||| |||||||||| | |||||| ||||| | |||||||||| Sbjct 12523593 CCCCTCAGAATATATACTGTATCCACGTGGACGAGAAGTCTCCAGAAGCGTTCAAAGAGG 12523534 Query 107845 CGGTCAAGGCCATTATTTCCTGCTTCCCCAATGTCTTCATGGCCAGTAAGTTGGTCCCGG 107904 | || ||| ||| ||| ||||| || ||||||||||| ||||| ||| |||| || | Sbjct 12523533 CAGTTGGGGCGATTGCTTCATGCTTTCCAAATGTCTTCATAGCCAGCAAGCTGGTTCCAG 12523474 Query 107905 TGGTTTATGCCTCCTGGTCCAGAGTGCAAGCTGACCTGAACTGTATGGAAGACTTGCTCC 107964 |||||||||| ||||||||||| |||||||| ||||||||||||||||| |||||||| | Sbjct 12523473 TGGTTTATGCTTCCTGGTCCAGGGTGCAAGCCGACCTGAACTGTATGGAGGACTTGCTGC 12523414 Query 107965 AGAGCTCAGTGCCATGGAAGTACTTACTGAATACATGCGGGACAGACTTCCCCATAAAGA 108024 ||||||| ||||| ||||| |||||||||||||| || ||||||||||| || ||||||| Sbjct 12523413 AGAGCTCGGTGCCTTGGAAATACTTACTGAATACCTGTGGGACAGACTTTCCTATAAAGA 12523354 Query 108025 CCAATGCCGAGATGGTCCTGGCCCTCAAGATGTTGAAGGGTAAGAACAGTATGGAGTCTG 108084 ||||||| |||||||||| |||||| ||||||||||| || ||||||||||||||||| | Sbjct 12523353 CCAATGCTGAGATGGTCCGGGCCCTTAAGATGTTGAATGGGAAGAACAGTATGGAGTCAG 12523294 Query 108085 AGGTACCTTCTGAGTCCaaaaaaaaTCGCTGGAAATACCGCTATGAGGTGACAGACACAC 108144 | ||||| ||| | ||||||| ||||||||||| | ||||| ||||| ||||| Sbjct 12523293 AAATACCTAGTGAATACAAAAAACTCCGCTGGAAATATCACTATGTGGTGAAGAACACAT 12523234 Query 108145 TGTACCCTACCAGCAAGATGAAGGACCCTCCCCCTGATAATTTACCCATGTTCACAGGGA 108204 ||||| |||| ||||| |||||| ||||| || |||| || |||||||||| || | Sbjct 12523233 TGTACAAAACCAACAAGAGGAAGGATCCTCCTCCCAATAACGTAACCATGTTCACCGGCA 12523174 Query 108205 ATGCCTATTTTGTGGCCTCTCGAGCCTTTGTCCAACATGTCTTAGACAACCCTAAATCCC 108264 |||||||| ||||||| ||||||| ||| || || ||||||||| | ||||| ||||||| Sbjct 12523173 ATGCCTATATTGTGGCTTCTCGAGACTTCGTTCATCATGTCTTAAATAACCCCAAATCCC 12523114 Query 108265 AAAGACTGGTTGAATGGGTCAAAGACACCTATAGCCCCGACGAACACCTCTGGGCCACCC 108324 || |||| |||||||||| ||||||||||| || || || ||||| ||||||||||||| Sbjct 12523113 AACAACTGATTGAATGGGTAAAAGACACCTACAGTCCTGATGAACATCTCTGGGCCACCC 12523054 Query 108325 TTCAGCGTGCTCCGTGGATGCCTGGCTCTGTTCCTAGCCACCCCAAGTATCACATCTCAG 108384 |||||||||| ||||||||||||||| ||| || | ||||||| ||||||||| Sbjct 12523053 TTCAGCGTGCCATTTGGATGCCTGGCTCTTCTCCCTTGCATCACAAGTATGACATCTCAG 12522994 Query 108385 ACATGACTGCCATCGCCAGGCTCGTCAAGTGGCAGTACCACGAGGGAGATGTCAGCATGG 108444 | ||||| | || |||||||| |||||||||||| | || |||||||||||||||| | Sbjct 12522993 ATATGACCTCTATTGCCAGGCTGGTCAAGTGGCAGCAACATGAGGGAGATGTCAGCAAAG 12522934 Query 108445 GGGCGCCTTATGCACCCTGCTCTGGAATCCATCGGAGGGCCATCTGCATTTACGGGGCCG 108504 |||| ||||| | || |||||||||||||| | | | ||| |||| ||||| ||||| | Sbjct 12522933 GGGCACCTTACGGCCCTTGCTCTGGAATCCACCAGCGTGCCGTCTGTATTTATGGGGCTG 12522874 Query 108505 GGGACCTGTACTGGATTCTCCAGAACCATCACCTCTTGGCAAACAAGTTTGACCCGAGGG 108564 |||||||| | ||||| || |||||||||||||| ||||| ||||||||||| || | || Sbjct 12522873 GGGACCTGCATTGGATGCTGCAGAACCATCACCTGTTGGCCAACAAGTTTGATCCAAAGG 12522814 Query 108565 TGGATGATAACGTCCTGCAGTGCTTAGAAGAGTACCTACGTCATAAGGCCATCTATGGGA 108624 |||||||||| || || |||||| |||||||||| ||||| |||||||||| ||||||| Sbjct 12522813 TGGATGATAATGTTCTTCAGTGCCTAGAAGAGTATCTACGCTATAAGGCCATGTATGGGA 12522754 Query 108625 CTGAACTTTGAG-----CTGCA------------CTGTGGGCCAGGGAC-TGTGCCAACA 108666 ||| ||| |||| ||||| ||||||| | || || ||||| ||| Sbjct 12522753 CTGGACTGTGAGGTACACTGCAGAGGAGTGCTGCCTGTGGGGCTGGAACATGTGCAAACG 12522694 Query 108667 TGCCCAGGGCGTACTGGTACTGTGTGGGGT-GGGGGACGAGGGCTGTGGAATCCATG 108722 | | || |||||| || |||||| ||||||| |||||| |||||||| || Sbjct 12522693 T---TGGAGCCTACTGGGACAACATGGGGTGGGGGGACCAGGGCTCTGGAATCCGTG 12522640 >seq82 Length=11338420 Score = 132 bits (146), Expect = 3e-26 Identities = 517/801 (65%), Gaps = 35/801 (4%) Strand=Plus/Plus Query 107695 GTAAAGAAGAGCTAGACTTCCCCATTGCCTACTCGATGGTGGTCCATGAGAAGATTGAAA 107754 ||||||| ||| || |||||| ||||| || || || ||||| ||| | || ||||||| Sbjct 3969641 GTAAAGAGGAGGCAGGCTTCCCAATTGCATATTCCATAGTGGTTCATCATAAAATTGAAA 3969700 Query 107755 ACTTTGAACGGCTGCTGCGAGCCGTGTATGCCCCTCAGAACATATACTGTGTCCACGTGG 107814 |||| |||| || | ||| | ||| |||||||| | ||||| |||| |||| Sbjct 3969701 TGCTTGACAGGCTCCTAAGGGCCATTTATATGCCTCAGAATTTCTACTGCATCCATGTGG 3969760 Query 107815 ATGTGAAGTCCCCAGAGACTTTCAAAGAGGCGGTCAAGGCCATTATTTCCTGCTTCCCCA 107874 | || || || |||| | || || || |||| |||| ||||| ||| | Sbjct 3969761 ACAGAAAATCAGAGGACTCTTTTATAGCTGCAGTGAAGGGCATTGCATCCTGTTTCAGGA 3969820 Query 107875 ATGTCTTCATGGCCAGTAAGTTGGTCCCGGTGGTTTATGCCTCCTGGTCCAGAGTGCAAG 107934 ||||||| |||||||| || ||| ||||| ||||| || ||| |||| || | Sbjct 3969821 ATGTCTTTGTGGCCAGTCAGCTGGAGAGTGTGGTCTATGCTTCGTGGAGTCGAGTTCAGG 3969880 Query 107935 CTGACCTGAACTGTATGGAAGACTTGCTCCAGA----GCTCAGTGCCATGGAAGTACTTA 107990 ||||||| ||||| ||| | ||| | || |||| || ||| | ||||||||||| Sbjct 3969881 CTGACCTCAACTGCATGAAGGACCT-CTACAGAAGGAGCACAGAG---TGGAAGTACTTG 3969936 Query 107991 CTGAATACATGCGGGACAGACTTCCCCATAAAGACCAATGCCGAGATGGTCCTGGCCCTC 108050 | ||| || |||| || || || || || ||||| || || ||| | ||| Sbjct 3969937 ATCAATCTTTGTGGGATGGATTTTCCTATTAAAACCAACCTGGAAATTGTCAGGAAGCTC 3969996 Query 108051 AAGATGTTGAAGGGTAAGAACAGTATGGAGTCTG---AGGTACCTTCTGAGTCCaaaaaa 108107 ||| ||| | |||| | |||| |||| | | || | || ||| | ||| | Sbjct 3969997 AAGTCGTTCATGGGTGAAAACAACCTGGAAACAGAGAAGATGCCATCTCA---TAAAGCA 3970053 Query 108108 aaTCGCTGGAAATACCGCTATGA-------GGTGACAGACACACTGTACCCTACCAGCAA 108160 | | |||||| | | ||||| | || || | | || || ||||| || Sbjct 3970054 GAAAGGTGGAAAAAACATTATGAAATCATCGATGGAAGGC-TAATGGAC---ACCAGGAA 3970109 Query 108161 GATGAAGGACCCTCCCCCTGATAATTTACCCATGTTCACAGGGAATGCCTATTTTGTGGC 108220 || | || ||| || ||| | ||| |||| | |||||||||||||| Sbjct 3970110 CCCCAAAACACAGCCTCCTCTCAAAACACCTCTTTTCTCAGGCAGTGCCTATTTTGTGGT 3970169 Query 108221 CTCTCGAGCCTTTGTCCAACATGTCTTAGACAA-CCCTAAATCCCAAAGACTGGTTGAAT 108279 | | | | | ||| | || |||| || | |||| ||| | | || | Sbjct 3970170 CAGTAGGGAGTATGTGGGCTACGTGCTAGAAAATGAAGACATCCAGAAG-TTCATGGAGT 3970228 Query 108280 GGGTCAAAGACACCTATAGCCCCGACGAACACCTCTGGGCCACCCTTCAGCGTGCTCCGT 108339 ||| |||||||| || ||||| || || | |||||||||||| | || | | ||| Sbjct 3970229 GGGCGAAAGACACGTACAGCCCAGATGAGTATCTCTGGGCCACCATCCAAAG-GATCCCC 3970287 Query 108340 G-GATGCCTGGCTCTGTTCC---TAGCCACCCCAAGTATCACATCTCAGACATGACTGCC 108395 | | || |||||| | || ||||| ||||||| || | || |||||| || Sbjct 3970288 GAGGCCCCGGGCTCTCTACCCTTGAGCCA---CAAGTATGACCTGTCTGACATGCAGGCT 3970344 Query 108396 ATCGCCAGGCTCGTCAAGTGGCAGTACCACGAGGGAGATGTCAGCATGGGGGCGCCTTAT 108455 | |||||| | ||||||||||| ||| || || ||||| | || ||| || || ||| Sbjct 3970345 GTTGCCAGGTTTGTCAAGTGGCAATACTTTGAAGGTGATGTTAACAAGGGCGCACCCTAT 3970404 Query 108456 GCACCCTGCTCTGGAATCCAT 108476 ||||||| ||| ||||| Sbjct 3970405 CCACCCTGTGATGGTGTCCAT 3970425 >seq27 Length=25514964 Score = 111 bits (122), Expect = 1e-19 Identities = 259/382 (68%), Gaps = 18/382 (5%) Strand=Plus/Minus Query 107698 AAGAAGAGCTAGACTTCCCCATTGCCTACTCGATGGTGGTCCATGAGAAGATTGAAAACT 107757 |||||||| | |||||| | ||||| ||||| | ||| || | | || | | Sbjct 15292151 AAGAAGAGGCCGCCTTCCCTCTGGCCTATGTCATGGTCATTCATAAGGATTTCGACACGT 15292092 Query 107758 TTGAACGGCTGCTGCGAGCCGTGTA--TGCCCCTCAGAACATATACTGTGTCCACGTGGA 107815 ||||| |||| | || ||||| || |||||| || | | |||||||| |||||||| Sbjct 15292091 TTGAAAGGCTCTTTCGGGCCGTCTACATGCCCCACA--ATGTCTACTGTGTGCACGTGGA 15292034 Query 107816 TGTGAAGTCCCCAGA-GACTTTCAAAGAGGCGGTCAAGGCCATTATTTC-CTGCTTCCCC 107873 || || ||| ||| || ||| |||| |||| || | ||| | |||||||||| Sbjct 15292033 TGCAAAATCCTCAGTCGAGTTTAAAAGCT-CGGTGCAG-CGGTTACTAAACTGCTTCCCC 15291976 Query 107874 AATGTCTTCATGGCCAGTAAGTTGGTCCCGGTGGTTTATGCCTCCTGGTCCAGAGTGCAA 107933 || | ||| |||| ||| ||| || ||||| ||||| | ||||| | || Sbjct 15291975 AACGCCTTTCTGGCTTCCAAGATGGAACCCGTGGTCTATGCAGGATTTTCCAGGCTCCAG 15291916 Query 107934 GCTGACCTGAACTGTATGGAAGACTTG-----CTCCAGAGCTCAGTGCCATGGAAGTACT 107988 |||||||||||||| ||| ||||| || |||| ||| || || ||||||||| Sbjct 15291915 GCTGACCTGAACTGCATGAAAGACCTGGTGGCCTCC-GAG----GTCCCCTGGAAGTACG 15291861 Query 107989 TACTGAATACATGCGGGACAGACTTCCCCATAAAGACCAATGCCGAGATGGTCCTGGCCC 108048 | | || || |||||| ||| ||||| | |||||||| ||||| || | | || Sbjct 15291860 TCATCAACACCTGCGGGCAAGATTTCCCTCTGAAGACCAACAGGGAGATCGTTCAGTACC 15291801 Query 108049 TCAAGATGTTGAAGGGTAAGAA 108070 | || ||| || || ||||| Sbjct 15291800 TGAAAGGGTTCAAAGGGAAGAA 15291779 Score = 87.8 bits (96), Expect = 1e-12 Identities = 173/249 (69%), Gaps = 14/249 (6%) Strand=Plus/Minus Query 107787 CCTCAGAACATATACTGTGTCCACGTGGATGTGAAGTCCCCAGA-GACTTTCAAAGAGGC 107845 ||||| || || |||||||| ||||| |||| ||| || | | || ||| |||| || Sbjct 15312758 CCTCAAAATATCTACTGTGTGCACGTAGATGAAAAGGCCACGGTTGAATTT-AAAGGCGC 15312700 Query 107846 GGTCAAGGCCATTATTTC-CTGCTTCCCCAATGTCTTCATGGCCAGTAAGTTGGTCCCGG 107904 || || | ||| | |||||||||||||| ||| |||| ||| ||| || | Sbjct 15312699 AGTGGAG-CGATTGCTGAGCTGCTTCCCCAATGCCTTTCTGGCTTCCAAGATGGAACCCG 15312641 Query 107905 TGGTTTATGCCTCCTGGTCCAGAGTGCAAGCTGACCTGAACTGTATGGAAGACTTG---- 107960 |||| |||| | ||||| | || |||||||||||||| ||| ||||| || Sbjct 15312640 TGGTCTATGGAGGATTTTCCAGGCTCCAGGCTGACCTGAACTGCATGAAAGACCTGGTGG 15312581 Query 107961 -CTCCAGAGCTCAGTGCCATGGAAGTACTTACTGAATACATGCGGGACAGACTTCCCCAT 108019 |||| ||| || || ||||||||| | | || || |||||| ||| ||||| | Sbjct 15312580 CCTCC-GAG----GTCCCCTGGAAGTACGTCATCAACACCTGCGGGCAAGATTTCCCTCT 15312526 Query 108020 AAAGACCAA 108028 |||||||| Sbjct 15312525 GAAGACCAA 15312517 Score = 82.4 bits (90), Expect = 5e-11 Identities = 229/347 (66%), Gaps = 12/347 (3%) Strand=Plus/Minus Query 107730 ATGGTGGTCCATGAGAAGATTGAAAACTTTGAACGGCTGCTGCGAGCCGTGTATGCCCCT 107789 |||||||| || | | |||| | ||||| |||| || | || || || | ||| Sbjct 15340587 ATGGTGGTTCACAAAGACTTTGACACATTTGAGAGGCTCCTCTGGGCTGTTTACACTCCT 15340528 Query 107790 CAGAACATATACTGTGTCCACGTGGATGTGAAGTCCCCAGAGACTTTCAAAGAGGCGGTC 107849 ||||| | |||||||| |||||||| |||| ||| | |||||| | ||| Sbjct 15340527 CAGAATGTCTACTGTGTGCACGTGGACAAGAAGGTGACAGCTATGTTCAAACTCGAGGTG 15340468 Query 107850 AAGGCCATTATTTC-CTGCTTCCCCAATGTCTTCATGGCCAGTAAGTTGGTCCCGGTGGT 107908 || | ||| | |||||||||||||| ||| |||| ||| ||| || |||| Sbjct 15340467 GAG-CAATTGCTGAGCTGCTTCCCCAATGCCTTTCTGGCTTCCAAGATGGAACCCATGGT 15340409 Query 107909 TTATGCCTCCTGGTCCAGAGTGCAAGCTGACCTGAACTGTATGGAAGACTTG-----CTC 107963 ||||| | ||||| | || || |||||||||| ||| ||||| || ||| Sbjct 15340408 CTATGCAGGATTTTCCAGGCTCCAGGCCAACCTGAACTGCATGAAAGACCTGGTGGCCTC 15340349 Query 107964 CAGAGCTCAGTGCCATGGAAGTACTTACTGAATACATGCGGGACAGACTTCCCCATAAAG 108023 | ||| || || ||||||||| | | || || || ||| ||| ||||| | ||| Sbjct 15340348 C-GAG----GTCCCCTGGAAGTACATCATCAACACCTGTGGGCAAGATTTCCCTCTGAAG 15340294 Query 108024 ACCAATGCCGAGATGGTCCTGGCCCTCAAGATGTTGAAGGGTAAGAA 108070 ||||| ||||| || | | ||| || ||| || || ||||| Sbjct 15340293 ACCAACAGGGAGATCGTTCAGTACCTGAAAGGGTTCAAAGGGAAGAA 15340247 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 348250849899546