Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heterocephalus_20glaber_20[refseq_20GCF_5F000247695.1_202012-02-17] 4,229 sequences; 2,618,204,639 total letters Query= NC_003094.2 Length=130759 Score E Sequences producing significant alignments: (Bits) Value seq16 82.4 6e-11 >seq16 Length=31725842 Score = 82.4 bits (90), Expect = 6e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 24832 ATGCAGATATTTGTTAAAACCTTAACCGGCAAAACGATAACCGTCGATGTCGAATCGAGC 24891 |||||||| ||||| ||||| | || || || || || || |||| || ||| | Sbjct 21647251 ATGCAGATTTTTGTAAAAACTCTTACGGGGAAGACCATCACGCTCGAGGTTGAACCCTCA 21647192 Query 24892 GACAGTGTAGAAACTGTTAAGGAAAAAATTGCTGCAAAAGAAGGCGTACCGGTTGACCAG 24951 |||| | |||||| ||| || | || || | || ||||| | || ||| ||| Sbjct 21647191 GACACTATAGAAAATGTAAAAGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGATCAG 21647132 Query 24952 CAACGTTTAATATATGCGGGCAAACAACTGGAAGATTCCATGACTATGAACGATTACAGC 25011 ||| | | || | ||| || || |||||||||||| ||| || ||||||| | Sbjct 21647131 CAAAGGCTGATCTTTGCTGGTAAGCAACTGGAAGATGGAGGTACTTTGTCTGATTACAAC 21647072 Query 25012 ATACAGAAAGAGGCCACGCTTCATTTAGTGTTACGATTGCGCGGAGGT 25059 || || || ||| |||| |||||| | ||||| |||| || || ||| Sbjct 21647071 ATTCAAAAGGAGTCCACCCTTCATCTTGTGTTGAGATTCCGTGGTGGT 21647024 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 418282440219680